Result of FASTA (omim) for
pF1KB9726
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9726, 431 aa
1>>>pF1KB9726 431 - 431 aa - 431 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.1167+/-0.000397; mu= -5.5007+/- 0.025
mean_var=486.2464+/-97.670, 0's: 0 Z-trim(125.6): 175 B-trim: 179 in 1/60
Lambda= 0.058163
statistics sampled from 49519 (49741) to 49519 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.83), E-opt: 0.2 (0.583), width: 16
Scan time: 8.140
The best scores are: opt bits E(85289)
XP_011523021 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 3074 271.9 2.3e-72
XP_011523012 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 3074 271.9 2.3e-72
XP_005257334 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 3074 271.9 2.3e-72
XP_011523022 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 3074 271.9 2.3e-72
XP_006721917 (OMIM: 142966) PREDICTED: homeobox pr ( 431) 3074 271.9 2.3e-72
NP_002137 (OMIM: 142966) homeobox protein Hox-B3 i ( 431) 3074 271.9 2.3e-72
XP_011523023 (OMIM: 142966) PREDICTED: homeobox pr ( 430) 3057 270.4 6.2e-72
XP_016880047 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
XP_016880052 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
XP_016880048 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
XP_016880049 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
XP_011523009 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
XP_016880051 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
XP_016880050 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
XP_016880046 (OMIM: 142966) PREDICTED: homeobox pr ( 578) 2807 249.6 1.5e-65
NP_001317251 (OMIM: 142966) homeobox protein Hox-B ( 358) 2566 229.1 1.4e-59
XP_011523028 (OMIM: 142966) PREDICTED: homeobox pr ( 358) 2566 229.1 1.4e-59
XP_011523010 (OMIM: 142966) PREDICTED: homeobox pr ( 488) 2204 198.9 2.4e-50
NP_001317252 (OMIM: 142966) homeobox protein Hox-B ( 299) 2140 193.3 7.1e-49
XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 1031 100.4 9.3e-21
XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 1031 100.4 9.3e-21
XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 1031 100.4 9.3e-21
XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 1031 100.4 9.3e-21
XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 1031 100.4 9.3e-21
NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 1031 100.4 9.3e-21
XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 1031 100.4 9.3e-21
XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 1031 100.4 9.3e-21
XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 959 94.4 6.2e-19
NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 959 94.4 6.2e-19
XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 959 94.4 6.2e-19
XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 959 94.4 6.2e-19
XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 959 94.4 6.2e-19
XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 959 94.4 6.2e-19
NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 959 94.4 6.2e-19
NP_000200 (OMIM: 125853,260370,600733,606176,60639 ( 283) 367 44.5 0.00042
NP_002136 (OMIM: 142967) homeobox protein Hox-B2 [ ( 356) 357 43.8 0.00087
NP_006726 (OMIM: 604685,612290) homeobox protein H ( 376) 356 43.7 0.00095
NP_001980 (OMIM: 142996) homeobox even-skipped hom ( 407) 353 43.5 0.0012
NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [ ( 320) 348 43.0 0.0014
NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 339 42.1 0.002
NP_076920 (OMIM: 142965) homeobox protein Hox-B4 [ ( 251) 337 41.9 0.0022
XP_005257332 (OMIM: 142967) PREDICTED: homeobox pr ( 247) 333 41.6 0.0028
NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 333 41.6 0.0029
NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 333 41.6 0.0029
NP_061975 (OMIM: 142952) homeobox protein Hox-A5 [ ( 270) 333 41.6 0.0029
NP_002138 (OMIM: 142960) homeobox protein Hox-B5 [ ( 269) 330 41.4 0.0035
NP_001073927 (OMIM: 142991) homeobox even-skipped ( 476) 326 41.3 0.0064
NP_663632 (OMIM: 616542) GS homeobox 1 [Homo sapie ( 264) 315 40.1 0.0082
>>XP_011523021 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 1420.2 bits: 271.9 E(85289): 2.3e-72
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 431 aa overlap (1-431:1-431)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
370 380 390 400 410 420
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_011 RIQEAPKLTHL
430
>>XP_011523012 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 1420.2 bits: 271.9 E(85289): 2.3e-72
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 431 aa overlap (1-431:1-431)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
370 380 390 400 410 420
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_011 RIQEAPKLTHL
430
>>XP_005257334 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 1420.2 bits: 271.9 E(85289): 2.3e-72
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 431 aa overlap (1-431:1-431)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
370 380 390 400 410 420
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_005 RIQEAPKLTHL
430
>>XP_011523022 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 1420.2 bits: 271.9 E(85289): 2.3e-72
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 431 aa overlap (1-431:1-431)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
370 380 390 400 410 420
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_011 RIQEAPKLTHL
430
>>XP_006721917 (OMIM: 142966) PREDICTED: homeobox protei (431 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 1420.2 bits: 271.9 E(85289): 2.3e-72
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 431 aa overlap (1-431:1-431)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
370 380 390 400 410 420
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_006 RIQEAPKLTHL
430
>>NP_002137 (OMIM: 142966) homeobox protein Hox-B3 isofo (431 aa)
initn: 3074 init1: 3074 opt: 3074 Z-score: 1420.2 bits: 271.9 E(85289): 2.3e-72
Smith-Waterman score: 3074; 100.0% identity (100.0% similar) in 431 aa overlap (1-431:1-431)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
370 380 390 400 410 420
430
pF1KB9 RIQEAPKLTHL
:::::::::::
NP_002 RIQEAPKLTHL
430
>>XP_011523023 (OMIM: 142966) PREDICTED: homeobox protei (430 aa)
initn: 2065 init1: 2065 opt: 3057 Z-score: 1412.5 bits: 270.4 E(85289): 6.2e-72
Smith-Waterman score: 3057; 99.8% identity (99.8% similar) in 431 aa overlap (1-431:1-430)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
XP_011 TNSTLTKQIFPWMKESRQTSKLKNNSPGT-EGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
360 370 380 390 400 410
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_011 RIQEAPKLTHL
420 430
>>XP_016880047 (OMIM: 142966) PREDICTED: homeobox protei (578 aa)
initn: 2803 init1: 2803 opt: 2807 Z-score: 1297.6 bits: 249.6 E(85289): 1.5e-65
Smith-Waterman score: 2807; 98.5% identity (99.0% similar) in 401 aa overlap (31-431:178-578)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
: :. .::::::::::::::::::::::
XP_016 PRPSGRPHRRGDLSPAARSGARCEYILCLPVLPSSVAKAATHLEGDYQRSACSLQSLGNA
150 160 170 180 190 200
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
210 220 230 240 250 260
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
270 280 290 300 310 320
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
330 340 350 360 370 380
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
390 400 410 420 430 440
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
450 460 470 480 490 500
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
510 520 530 540 550 560
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_016 RIQEAPKLTHL
570
>>XP_016880052 (OMIM: 142966) PREDICTED: homeobox protei (578 aa)
initn: 2803 init1: 2803 opt: 2807 Z-score: 1297.6 bits: 249.6 E(85289): 1.5e-65
Smith-Waterman score: 2807; 98.5% identity (99.0% similar) in 401 aa overlap (31-431:178-578)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
: :. .::::::::::::::::::::::
XP_016 PRPSGRPHRRGDLSPAARSGARCEYILCLPVLPSSVAKAATHLEGDYQRSACSLQSLGNA
150 160 170 180 190 200
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
210 220 230 240 250 260
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
270 280 290 300 310 320
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
330 340 350 360 370 380
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
390 400 410 420 430 440
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
450 460 470 480 490 500
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
510 520 530 540 550 560
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_016 RIQEAPKLTHL
570
>>XP_016880048 (OMIM: 142966) PREDICTED: homeobox protei (578 aa)
initn: 2803 init1: 2803 opt: 2807 Z-score: 1297.6 bits: 249.6 E(85289): 1.5e-65
Smith-Waterman score: 2807; 98.5% identity (99.0% similar) in 401 aa overlap (31-431:178-578)
10 20 30 40 50 60
pF1KB9 MQKATYYDNAAAALFGGYSSYPGSNGFGFDVPPQPPFQAATHLEGDYQRSACSLQSLGNA
: :. .::::::::::::::::::::::
XP_016 PRPSGRPHRRGDLSPAARSGARCEYILCLPVLPSSVAKAATHLEGDYQRSACSLQSLGNA
150 160 170 180 190 200
70 80 90 100 110 120
pF1KB9 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APHAKSKELNGSCMRPGLAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPG
210 220 230 240 250 260
130 140 150 160 170 180
pF1KB9 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNSTLTKQIFPWMKESRQTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDK
270 280 290 300 310 320
190 200 210 220 230 240
pF1KB9 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRR
330 340 350 360 370 380
250 260 270 280 290 300
pF1KB9 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQN
390 400 410 420 430 440
310 320 330 340 350 360
pF1KB9 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AYALPSNYQPPLKGCGAPQKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYAD
450 460 470 480 490 500
370 380 390 400 410 420
pF1KB9 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLPPPAGPSLYGLNHLSHHPSGNLDYNGAPPMAPSQHHGPCEPHPTYTDLSSHHAPPPQG
510 520 530 540 550 560
430
pF1KB9 RIQEAPKLTHL
:::::::::::
XP_016 RIQEAPKLTHL
570
431 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:32:42 2016 done: Fri Nov 4 18:32:43 2016
Total Scan time: 8.140 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]