Result of FASTA (omim) for
pF1KB9731
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9731, 474 aa
1>>>pF1KB9731 474 - 474 aa - 474 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5946+/-0.000353; mu= 13.9725+/- 0.022
mean_var=123.7269+/-25.068, 0's: 0 Z-trim(118.8): 414 B-trim: 959 in 1/49
Lambda= 0.115303
statistics sampled from 31651 (32069) to 31651 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.376), width: 16
Scan time: 10.470
The best scores are: opt bits E(85289)
NP_000448 (OMIM: 125850,125853,600281,616026) hepa ( 474) 3183 540.4 4e-153
NP_001274112 (OMIM: 125850,125853,600281,616026) h ( 449) 2945 500.8 3.2e-141
NP_787110 (OMIM: 125850,125853,600281,616026) hepa ( 452) 2945 500.8 3.2e-141
NP_001245284 (OMIM: 125850,125853,600281,616026) h ( 467) 2945 500.8 3.3e-141
XP_005260464 (OMIM: 125850,125853,600281,616026) P ( 513) 2945 500.9 3.5e-141
NP_849180 (OMIM: 125850,125853,600281,616026) hepa ( 464) 2812 478.7 1.5e-134
NP_001274111 (OMIM: 125850,125853,600281,616026) h ( 439) 2574 439.1 1.2e-122
NP_001025174 (OMIM: 125850,125853,600281,616026) h ( 442) 2574 439.1 1.2e-122
NP_849181 (OMIM: 125850,125853,600281,616026) hepa ( 417) 2497 426.3 8.1e-119
NP_001274113 (OMIM: 125850,125853,600281,616026) h ( 392) 2259 386.7 6.4e-107
NP_001025175 (OMIM: 125850,125853,600281,616026) h ( 395) 2259 386.7 6.4e-107
NP_004124 (OMIM: 605966) hepatocyte nuclear factor ( 445) 2080 356.9 6.5e-98
NP_001317490 (OMIM: 605966) hepatocyte nuclear fac ( 408) 1946 334.6 3.1e-91
XP_016868862 (OMIM: 605966) PREDICTED: hepatocyte ( 408) 1946 334.6 3.1e-91
XP_016868864 (OMIM: 605966) PREDICTED: hepatocyte ( 408) 1946 334.6 3.1e-91
XP_016868863 (OMIM: 605966) PREDICTED: hepatocyte ( 408) 1946 334.6 3.1e-91
XP_016868865 (OMIM: 605966) PREDICTED: hepatocyte ( 408) 1946 334.6 3.1e-91
NP_001278850 (OMIM: 180245) retinoic acid receptor ( 365) 907 161.7 3.1e-39
NP_001278849 (OMIM: 180245) retinoic acid receptor ( 435) 907 161.8 3.5e-39
NP_002948 (OMIM: 180245) retinoic acid receptor RX ( 462) 907 161.8 3.7e-39
NP_068811 (OMIM: 180246) retinoic acid receptor RX ( 533) 907 161.9 4.1e-39
NP_008848 (OMIM: 180247) retinoic acid receptor RX ( 463) 903 161.1 5.8e-39
NP_001243499 (OMIM: 180247) retinoic acid receptor ( 340) 896 159.9 1e-38
NP_001243500 (OMIM: 180247) retinoic acid receptor ( 340) 896 159.9 1e-38
NP_066285 (OMIM: 107773,615779) COUP transcription ( 414) 787 141.8 3.4e-33
NP_005645 (OMIM: 132890,615722) COUP transcription ( 423) 786 141.6 3.9e-33
NP_001278918 (OMIM: 180246) retinoic acid receptor ( 347) 601 110.8 6.2e-24
XP_016866665 (OMIM: 180246) PREDICTED: retinoic ac ( 414) 602 111.0 6.3e-24
XP_005249335 (OMIM: 180246) PREDICTED: retinoic ac ( 441) 602 111.1 6.6e-24
XP_011513098 (OMIM: 180246) PREDICTED: retinoic ac ( 420) 601 110.9 7.1e-24
NP_001257330 (OMIM: 180246) retinoic acid receptor ( 537) 602 111.1 7.7e-24
NP_001138629 (OMIM: 107773,615779) COUP transcript ( 261) 431 82.4 1.6e-15
NP_001138628 (OMIM: 107773,615779) COUP transcript ( 261) 431 82.4 1.6e-15
NP_001138627 (OMIM: 107773,615779) COUP transcript ( 281) 431 82.5 1.7e-15
XP_016865286 (OMIM: 132890,615722) PREDICTED: COUP ( 273) 429 82.1 2.1e-15
NP_001027458 (OMIM: 601529) nuclear receptor subfa ( 467) 431 82.6 2.5e-15
NP_001120834 (OMIM: 601529) nuclear receptor subfa ( 483) 431 82.6 2.6e-15
XP_011537019 (OMIM: 601529) PREDICTED: nuclear rec ( 507) 431 82.7 2.7e-15
XP_011537018 (OMIM: 601529) PREDICTED: nuclear rec ( 521) 431 82.7 2.7e-15
XP_006719647 (OMIM: 601529) PREDICTED: nuclear rec ( 557) 431 82.7 2.9e-15
XP_005269190 (OMIM: 601529) PREDICTED: nuclear rec ( 598) 431 82.7 3e-15
NP_003288 (OMIM: 601529) nuclear receptor subfamil ( 603) 431 82.7 3.1e-15
NP_001278623 (OMIM: 601426) nuclear receptor subfa ( 596) 414 79.9 2.2e-14
XP_016862609 (OMIM: 601426) PREDICTED: nuclear rec ( 596) 414 79.9 2.2e-14
XP_011532368 (OMIM: 601426) PREDICTED: nuclear rec ( 615) 414 79.9 2.2e-14
NP_003289 (OMIM: 601426) nuclear receptor subfamil ( 615) 414 79.9 2.2e-14
XP_011532367 (OMIM: 601426) PREDICTED: nuclear rec ( 615) 414 79.9 2.2e-14
XP_011532366 (OMIM: 601426) PREDICTED: nuclear rec ( 615) 414 79.9 2.2e-14
XP_011532365 (OMIM: 601426) PREDICTED: nuclear rec ( 629) 414 79.9 2.2e-14
XP_011532363 (OMIM: 601426) PREDICTED: nuclear rec ( 648) 414 79.9 2.3e-14
>>NP_000448 (OMIM: 125850,125853,600281,616026) hepatocy (474 aa)
initn: 3183 init1: 3183 opt: 3183 Z-score: 2870.1 bits: 540.4 E(85289): 4e-153
Smith-Waterman score: 3183; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)
10 20 30 40 50 60
pF1KB9 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 FRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FGMAKIDNLLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FGMAKIDNLLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEW
370 380 390 400 410 420
430 440 450 460 470
pF1KB9 PRPRGQAATPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PRPRGQAATPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
430 440 450 460 470
>>NP_001274112 (OMIM: 125850,125853,600281,616026) hepat (449 aa)
initn: 2945 init1: 2945 opt: 2945 Z-score: 2656.5 bits: 500.8 E(85289): 3.2e-141
Smith-Waterman score: 2945; 100.0% identity (100.0% similar) in 436 aa overlap (39-474:14-449)
10 20 30 40 50 60
pF1KB9 DMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALCAICGDRAT
::::::::::::::::::::::::::::::
NP_001 MSDWGQGFPQDPPDTSPSEGTNLNAPNSLGVSALCAICGDRAT
10 20 30 40
70 80 90 100 110 120
pF1KB9 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB9 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
350 360 370 380 390 400
430 440 450 460 470
pF1KB9 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
410 420 430 440
>>NP_787110 (OMIM: 125850,125853,600281,616026) hepatocy (452 aa)
initn: 2945 init1: 2945 opt: 2945 Z-score: 2656.4 bits: 500.8 E(85289): 3.2e-141
Smith-Waterman score: 2945; 100.0% identity (100.0% similar) in 436 aa overlap (39-474:17-452)
10 20 30 40 50 60
pF1KB9 DMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALCAICGDRAT
::::::::::::::::::::::::::::::
NP_787 MVSVNAPLGAPVESSYDTSPSEGTNLNAPNSLGVSALCAICGDRAT
10 20 30 40
70 80 90 100 110 120
pF1KB9 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB9 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
350 360 370 380 390 400
430 440 450 460 470
pF1KB9 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
::::::::::::::::::::::::::::::::::::::::::::::
NP_787 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
410 420 430 440 450
>>NP_001245284 (OMIM: 125850,125853,600281,616026) hepat (467 aa)
initn: 2945 init1: 2945 opt: 2945 Z-score: 2656.2 bits: 500.8 E(85289): 3.3e-141
Smith-Waterman score: 2945; 100.0% identity (100.0% similar) in 436 aa overlap (39-474:32-467)
10 20 30 40 50 60
pF1KB9 DMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALCAICGDRAT
::::::::::::::::::::::::::::::
NP_001 ILLPLRLARLRHPLRHHWSISGGVDSSPQGDTSPSEGTNLNAPNSLGVSALCAICGDRAT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
370 380 390 400 410 420
430 440 450 460 470
pF1KB9 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
430 440 450 460
>>XP_005260464 (OMIM: 125850,125853,600281,616026) PREDI (513 aa)
initn: 3169 init1: 2945 opt: 2945 Z-score: 2655.7 bits: 500.9 E(85289): 3.5e-141
Smith-Waterman score: 3055; 92.3% identity (92.3% similar) in 506 aa overlap (8-474:8-513)
10 20 30
pF1KB9 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGN----------------------
:::::::::::::::::::::::::::::::
XP_005 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNGRWGQMCPGILLPLRLARLRHP
10 20 30 40 50 60
40 50 60 70 80
pF1KB9 -----------------DTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCK
:::::::::::::::::::::::::::::::::::::::::::
XP_005 LRHHWSISGGVDSSPQGDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCK
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB9 GFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRR
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB9 SSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVCESMKEQLLVLVEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVCESMKEQLLVLVEW
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB9 AKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEM
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB9 SRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLED
310 320 330 340 350 360
330 340 350 360 370 380
pF1KB9 YINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSPSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSPSD
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB9 APHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAATPETPQPSPPGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAATPETPQPSPPGGS
430 440 450 460 470 480
450 460 470
pF1KB9 GSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
:::::::::::::::::::::::::::::::::
XP_005 GSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
490 500 510
>>NP_849180 (OMIM: 125850,125853,600281,616026) hepatocy (464 aa)
initn: 2783 init1: 2783 opt: 2812 Z-score: 2536.7 bits: 478.7 E(85289): 1.5e-134
Smith-Waterman score: 3061; 97.7% identity (97.9% similar) in 474 aa overlap (1-474:1-464)
10 20 30 40 50 60
pF1KB9 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 AICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 FRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 FRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 IASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 GLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FGMAKIDNLLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEW
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 FGMAKIDNLLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQM---
370 380 390 400 410
430 440 450 460 470
pF1KB9 PRPRGQAATPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
.::::::::::::::::::::::::::::::::::::::::::::::
NP_849 -------STPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
420 430 440 450 460
>>NP_001274111 (OMIM: 125850,125853,600281,616026) hepat (439 aa)
initn: 2545 init1: 2545 opt: 2574 Z-score: 2323.1 bits: 439.1 E(85289): 1.2e-122
Smith-Waterman score: 2823; 97.5% identity (97.7% similar) in 436 aa overlap (39-474:14-439)
10 20 30 40 50 60
pF1KB9 DMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALCAICGDRAT
::::::::::::::::::::::::::::::
NP_001 MSDWGQGFPQDPPDTSPSEGTNLNAPNSLGVSALCAICGDRAT
10 20 30 40
70 80 90 100 110 120
pF1KB9 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB9 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
::::::::::::::::::::::::::::::::::::::::::::::::: .
NP_001 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQM----------S
350 360 370 380 390
430 440 450 460 470
pF1KB9 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
400 410 420 430
>>NP_001025174 (OMIM: 125850,125853,600281,616026) hepat (442 aa)
initn: 2545 init1: 2545 opt: 2574 Z-score: 2323.0 bits: 439.1 E(85289): 1.2e-122
Smith-Waterman score: 2823; 97.5% identity (97.7% similar) in 436 aa overlap (39-474:17-442)
10 20 30 40 50 60
pF1KB9 DMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALCAICGDRAT
::::::::::::::::::::::::::::::
NP_001 MVSVNAPLGAPVESSYDTSPSEGTNLNAPNSLGVSALCAICGDRAT
10 20 30 40
70 80 90 100 110 120
pF1KB9 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB9 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAA
::::::::::::::::::::::::::::::::::::::::::::::::: .
NP_001 LLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQM----------S
350 360 370 380 390
430 440 450 460 470
pF1KB9 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
400 410 420 430 440
>>NP_849181 (OMIM: 125850,125853,600281,616026) hepatocy (417 aa)
initn: 2495 init1: 2495 opt: 2497 Z-score: 2254.1 bits: 426.3 E(85289): 8.1e-119
Smith-Waterman score: 2501; 95.3% identity (95.8% similar) in 403 aa overlap (1-389:1-403)
10 20 30 40 50 60
pF1KB9 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 AICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 FRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 FRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 IASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 IASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_849 GLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKL
310 320 330 340 350 360
370 380 390 400
pF1KB9 FGMAKIDNLLQEMLLGG-------------SPSDAPHA-HHPLHPHLMQEHMGTNVIVAN
::::::::::::::::: ::.: ::. ::
NP_849 FGMAKIDNLLQEMLLGGPCQAQEGRGWSGDSPGDRPHTVSSPLSSLASPLCRFGQVA
370 380 390 400 410
410 420 430 440 450 460
pF1KB9 TMPTHLSNGQMCEWPRPRGQAATPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQP
>>NP_001274113 (OMIM: 125850,125853,600281,616026) hepat (392 aa)
initn: 2257 init1: 2257 opt: 2259 Z-score: 2040.5 bits: 386.7 E(85289): 6.4e-107
Smith-Waterman score: 2263; 94.8% identity (95.3% similar) in 365 aa overlap (39-389:14-378)
10 20 30 40 50 60
pF1KB9 DMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALCAICGDRAT
::::::::::::::::::::::::::::::
NP_001 MSDWGQGFPQDPPDTSPSEGTNLNAPNSLGVSALCAICGDRAT
10 20 30 40
70 80 90 100 110 120
pF1KB9 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVC
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGND
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKI
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB9 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDN
290 300 310 320 330 340
370 380 390 400 410
pF1KB9 LLQEMLLGG-------------SPSDAPHA-HHPLHPHLMQEHMGTNVIVANTMPTHLSN
::::::::: ::.: ::. ::
NP_001 LLQEMLLGGPCQAQEGRGWSGDSPGDRPHTVSSPLSSLASPLCRFGQVA
350 360 370 380 390
420 430 440 450 460 470
pF1KB9 GQMCEWPRPRGQAATPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI
474 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:34:32 2016 done: Fri Nov 4 18:34:34 2016
Total Scan time: 10.470 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]