Result of FASTA (omim) for
pF1KB9758
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9758, 711 aa
1>>>pF1KB9758 711 - 711 aa - 711 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5108+/-0.000509; mu= 7.8173+/- 0.032
mean_var=368.4197+/-77.680, 0's: 0 Z-trim(118.8): 1898 B-trim: 0 in 0/53
Lambda= 0.066819
statistics sampled from 29838 (32092) to 29838 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.376), width: 16
Scan time: 11.340
The best scores are: opt bits E(85289)
NP_001303941 (OMIM: 613842) GDNF-inducible zinc fi ( 711) 4837 481.3 5.5e-135
NP_071927 (OMIM: 613842) GDNF-inducible zinc finge ( 711) 4837 481.3 5.5e-135
XP_011527623 (OMIM: 613842) PREDICTED: GDNF-induci ( 711) 4837 481.3 5.5e-135
XP_011527624 (OMIM: 613842) PREDICTED: GDNF-induci ( 711) 4837 481.3 5.5e-135
NP_001303948 (OMIM: 613842) GDNF-inducible zinc fi ( 677) 4087 409.0 3.1e-113
XP_016883507 (OMIM: 613842) PREDICTED: GDNF-induci ( 677) 4087 409.0 3.1e-113
XP_016883506 (OMIM: 613842) PREDICTED: GDNF-induci ( 677) 4087 409.0 3.1e-113
XP_005260857 (OMIM: 613842) PREDICTED: GDNF-induci ( 677) 4087 409.0 3.1e-113
XP_016883508 (OMIM: 613842) PREDICTED: GDNF-induci ( 545) 3696 371.2 6.1e-102
XP_005260859 (OMIM: 613842) PREDICTED: GDNF-induci ( 545) 3696 371.2 6.1e-102
XP_016881868 (OMIM: 613904) PREDICTED: zinc finger ( 527) 971 108.5 7.1e-23
XP_016881871 (OMIM: 613904) PREDICTED: zinc finger ( 527) 971 108.5 7.1e-23
NP_001317411 (OMIM: 613904) zinc finger protein 56 ( 527) 971 108.5 7.1e-23
XP_016881869 (OMIM: 613904) PREDICTED: zinc finger ( 527) 971 108.5 7.1e-23
NP_001318063 (OMIM: 606954) zinc finger protein 25 ( 423) 969 108.1 7.2e-23
NP_001318062 (OMIM: 606954) zinc finger protein 25 ( 435) 969 108.2 7.3e-23
NP_003424 (OMIM: 604074) zinc finger protein 132 [ ( 706) 973 108.8 7.4e-23
XP_016881641 (OMIM: 604750) PREDICTED: zinc finger ( 502) 970 108.3 7.4e-23
XP_016881642 (OMIM: 604750) PREDICTED: zinc finger ( 502) 970 108.3 7.4e-23
NP_066385 (OMIM: 606954) zinc finger protein 253 i ( 499) 969 108.2 7.9e-23
XP_016881867 (OMIM: 613904) PREDICTED: zinc finger ( 650) 971 108.6 8e-23
XP_011524841 (OMIM: 613904) PREDICTED: zinc finger ( 686) 971 108.6 8.3e-23
XP_016881866 (OMIM: 613904) PREDICTED: zinc finger ( 686) 971 108.6 8.3e-23
NP_689697 (OMIM: 613904) zinc finger protein 569 i ( 686) 971 108.6 8.3e-23
XP_016881865 (OMIM: 613904) PREDICTED: zinc finger ( 686) 971 108.6 8.3e-23
XP_006723109 (OMIM: 613904) PREDICTED: zinc finger ( 710) 971 108.7 8.4e-23
XP_011524840 (OMIM: 613904) PREDICTED: zinc finger ( 710) 971 108.7 8.4e-23
XP_006723111 (OMIM: 613904) PREDICTED: zinc finger ( 710) 971 108.7 8.4e-23
XP_006723110 (OMIM: 613904) PREDICTED: zinc finger ( 710) 971 108.7 8.4e-23
XP_016881640 (OMIM: 604750) PREDICTED: zinc finger ( 669) 970 108.5 8.7e-23
XP_016881639 (OMIM: 604750) PREDICTED: zinc finger ( 688) 970 108.5 8.9e-23
NP_001138296 (OMIM: 604750) zinc finger protein 23 ( 700) 970 108.5 8.9e-23
NP_006621 (OMIM: 604750) zinc finger protein 234 [ ( 700) 970 108.5 8.9e-23
XP_016881638 (OMIM: 604750) PREDICTED: zinc finger ( 700) 970 108.5 8.9e-23
XP_006723037 (OMIM: 604750) PREDICTED: zinc finger ( 700) 970 108.5 8.9e-23
NP_001265160 (OMIM: 603132) zinc finger protein 18 ( 612) 966 108.1 1.1e-22
XP_016882717 (OMIM: 194554) PREDICTED: zinc finger ( 646) 966 108.1 1.1e-22
XP_016882719 (OMIM: 194554) PREDICTED: zinc finger ( 646) 966 108.1 1.1e-22
XP_016882718 (OMIM: 194554) PREDICTED: zinc finger ( 646) 966 108.1 1.1e-22
XP_011525573 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_011525571 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_016882707 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_016882715 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
NP_003416 (OMIM: 194554) zinc finger protein 45 [H ( 682) 966 108.1 1.2e-22
XP_016882716 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_016882713 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_011525569 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_016882709 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_011525575 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
XP_016882710 (OMIM: 194554) PREDICTED: zinc finger ( 682) 966 108.1 1.2e-22
>>NP_001303941 (OMIM: 613842) GDNF-inducible zinc finger (711 aa)
initn: 4837 init1: 4837 opt: 4837 Z-score: 2544.5 bits: 481.3 E(85289): 5.5e-135
Smith-Waterman score: 4837; 99.9% identity (100.0% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
610 620 630 640 650 660
670 680 690 700 710
pF1KB9 QENSSADTACKADDTVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_001 QENSSADTACKADDSVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
670 680 690 700 710
>>NP_071927 (OMIM: 613842) GDNF-inducible zinc finger pr (711 aa)
initn: 4837 init1: 4837 opt: 4837 Z-score: 2544.5 bits: 481.3 E(85289): 5.5e-135
Smith-Waterman score: 4837; 99.9% identity (100.0% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
610 620 630 640 650 660
670 680 690 700 710
pF1KB9 QENSSADTACKADDTVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_071 QENSSADTACKADDSVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
670 680 690 700 710
>>XP_011527623 (OMIM: 613842) PREDICTED: GDNF-inducible (711 aa)
initn: 4837 init1: 4837 opt: 4837 Z-score: 2544.5 bits: 481.3 E(85289): 5.5e-135
Smith-Waterman score: 4837; 99.9% identity (100.0% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
610 620 630 640 650 660
670 680 690 700 710
pF1KB9 QENSSADTACKADDTVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
::::::::::::::.::::::::::::::::::::::::::::::::::::
XP_011 QENSSADTACKADDSVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
670 680 690 700 710
>>XP_011527624 (OMIM: 613842) PREDICTED: GDNF-inducible (711 aa)
initn: 4837 init1: 4837 opt: 4837 Z-score: 2544.5 bits: 481.3 E(85289): 5.5e-135
Smith-Waterman score: 4837; 99.9% identity (100.0% similar) in 711 aa overlap (1-711:1-711)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
610 620 630 640 650 660
670 680 690 700 710
pF1KB9 QENSSADTACKADDTVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
::::::::::::::.::::::::::::::::::::::::::::::::::::
XP_011 QENSSADTACKADDSVVSQDTLLATTISELSELTPQTDSMPTQLHSLSNME
670 680 690 700 710
>>NP_001303948 (OMIM: 613842) GDNF-inducible zinc finger (677 aa)
initn: 4684 init1: 4087 opt: 4087 Z-score: 2153.9 bits: 409.0 E(85289): 3.1e-113
Smith-Waterman score: 4087; 99.8% identity (100.0% similar) in 596 aa overlap (1-596:1-596)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSMARPR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
NP_001 TMTDTRLNSLTKSMCHPSFRINCCLLQKMAISTTWLQSKTLYLPCRRTVLLTQPARQMTP
610 620 630 640 650 660
>>XP_016883507 (OMIM: 613842) PREDICTED: GDNF-inducible (677 aa)
initn: 4684 init1: 4087 opt: 4087 Z-score: 2153.9 bits: 409.0 E(85289): 3.1e-113
Smith-Waterman score: 4087; 99.8% identity (100.0% similar) in 596 aa overlap (1-596:1-596)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSMARPR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
XP_016 TMTDTRLNSLTKSMCHPSFRINCCLLQKMAISTTWLQSKTLYLPCRRTVLLTQPARQMTP
610 620 630 640 650 660
>>XP_016883506 (OMIM: 613842) PREDICTED: GDNF-inducible (677 aa)
initn: 4684 init1: 4087 opt: 4087 Z-score: 2153.9 bits: 409.0 E(85289): 3.1e-113
Smith-Waterman score: 4087; 99.8% identity (100.0% similar) in 596 aa overlap (1-596:1-596)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSMARPR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
XP_016 TMTDTRLNSLTKSMCHPSFRINCCLLQKMAISTTWLQSKTLYLPCRRTVLLTQPARQMTP
610 620 630 640 650 660
>>XP_005260857 (OMIM: 613842) PREDICTED: GDNF-inducible (677 aa)
initn: 4684 init1: 4087 opt: 4087 Z-score: 2153.9 bits: 409.0 E(85289): 3.1e-113
Smith-Waterman score: 4087; 99.8% identity (100.0% similar) in 596 aa overlap (1-596:1-596)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_005 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSMARPR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 TPWKSFLVIVDGSPKNDDGHKTEQPDEEYVSSKLSDKLLSFAENGHFHNLAAVQDTVPTM
XP_005 TMTDTRLNSLTKSMCHPSFRINCCLLQKMAISTTWLQSKTLYLPCRRTVLLTQPARQMTP
610 620 630 640 650 660
>>XP_016883508 (OMIM: 613842) PREDICTED: GDNF-inducible (545 aa)
initn: 4083 init1: 3696 opt: 3696 Z-score: 1951.2 bits: 371.2 E(85289): 6.1e-102
Smith-Waterman score: 3696; 99.6% identity (99.6% similar) in 545 aa overlap (1-545:1-545)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
:: :
XP_016 HTDTR
>>XP_005260859 (OMIM: 613842) PREDICTED: GDNF-inducible (545 aa)
initn: 4083 init1: 3696 opt: 3696 Z-score: 1951.2 bits: 371.2 E(85289): 6.1e-102
Smith-Waterman score: 3696; 99.6% identity (99.6% similar) in 545 aa overlap (1-545:1-545)
10 20 30 40 50 60
pF1KB9 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MESGAVLLESKSSPFNLLHEMHELRLLGHLCDVTVSVEYQGVRKDFMAHKAVLAATSKFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KEVFLNEKSVDGTRTNVYLNEVQVADFASFLEFVYTAKVQVEEDRVQRMLEVAEKLKCLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSETCFQLKKQMLESVLLELQNFSESQEVEVSSGSQVSAAPAPRASVATDGPHPSGLTDS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDYPGERASNGMSSDLPPKKSKDKLDKKKEVVKPPYPKIRRASGRLAGRKVFVEIPKKKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRRLREQQKTAEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQTFANR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CNLKSHQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALRLHERTHTGDRPYGCTECGARFSQPSALKTHMRIHTGEKPFVCDECGARFTQNHMLIY
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HKRCHTGERPFMCETCGKSFASKEYLKHHNRIHTGSKPFKCEVCFRTFAQRNSLYQHIKV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 HTGERPYCCDQCGKQFTQLNALQRHRRIHTGERPFMCNACGRTFTDKSTLRRHTSIHDKN
:: :
XP_005 HTDTR
711 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:43:33 2016 done: Fri Nov 4 18:43:35 2016
Total Scan time: 11.340 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]