Result of FASTA (ccds) for
pF1KB9807
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9807, 227 aa
1>>>pF1KB9807 227 - 227 aa - 227 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8983+/-0.00101; mu= 5.0859+/- 0.061
mean_var=209.3181+/-42.974, 0's: 0 Z-trim(113.1): 23 B-trim: 1015 in 2/50
Lambda= 0.088648
statistics sampled from 13796 (13812) to 13796 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.765), E-opt: 0.2 (0.424), width: 16
Scan time: 2.210
The best scores are: opt bits E(32554)
CCDS14496.1 TCEAL2 gene_id:140597|Hs108|chrX ( 227) 1552 210.1 9.6e-55
CCDS14510.2 TCEAL4 gene_id:79921|Hs108|chrX ( 215) 876 123.6 9.8e-29
CCDS76004.1 TCEAL4 gene_id:79921|Hs108|chrX ( 358) 876 123.8 1.4e-28
CCDS35356.1 TCEAL5 gene_id:340543|Hs108|chrX ( 206) 595 87.6 6.3e-18
CCDS14511.1 TCEAL3 gene_id:85012|Hs108|chrX ( 200) 560 83.2 1.4e-16
CCDS43978.1 TCEAL6 gene_id:158931|Hs108|chrX ( 183) 473 72.0 2.9e-13
>>CCDS14496.1 TCEAL2 gene_id:140597|Hs108|chrX (227 aa)
initn: 1552 init1: 1552 opt: 1552 Z-score: 1096.3 bits: 210.1 E(32554): 9.6e-55
Smith-Waterman score: 1552; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KB9 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK
130 140 150 160 170 180
190 200 210 220
pF1KB9 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV
190 200 210 220
>>CCDS14510.2 TCEAL4 gene_id:79921|Hs108|chrX (215 aa)
initn: 825 init1: 825 opt: 876 Z-score: 629.3 bits: 123.6 E(32554): 9.8e-29
Smith-Waterman score: 1172; 78.5% identity (86.8% similar) in 228 aa overlap (1-227:1-215)
10 20 30 40 50
pF1KB9 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRV-EEPLK
::::..::::: :::::..::::: : ::::.: ::::::::::.::: :: :: ::
CCDS14 MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE
:: :::: :.:: ::::::.:.:::.:::. ::::: :. :::::::
CCDS14 DKGKPESEGEAK-EGKSEREGESEMEGGSEREGKPEIEGK------------PESEGEPG
70 80 90 100
120 130 140 150 160 170
pF1KB9 SETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVED
::::::::::::::.:::::::::::::.:::.:::::::::::::::::::::::.:.:
CCDS14 SETRAAGKRPAEDDVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQD
110 120 130 140 150 160
180 190 200 210 220
pF1KB9 KRRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV
..::::::::::::::::::::::::::::::::::::::: ::::::
CCDS14 EKRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDIEDIPYV
170 180 190 200 210
>>CCDS76004.1 TCEAL4 gene_id:79921|Hs108|chrX (358 aa)
initn: 825 init1: 825 opt: 876 Z-score: 626.5 bits: 123.8 E(32554): 1.4e-28
Smith-Waterman score: 1172; 78.5% identity (86.8% similar) in 228 aa overlap (1-227:144-358)
10 20 30
pF1KB9 MEKLFNENEGMPSNQGKIDNEEQPPHEGKP
::::..::::: :::::..::::: : ::
CCDS76 QRSAKPEKEEQPVQNPRRSVKDRKRRGNLDMEKLYSENEGMASNQGKMENEEQPQDERKP
120 130 140 150 160 170
40 50 60 70 80
pF1KB9 EVACILEDKKLENEGNTENTGKRV-EEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSK
::.: ::::::::::.::: :: :: :::: :::: :.:: ::::::.:.:::.:::.
CCDS76 EVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESEGEAK-EGKSEREGESEMEGGSE
180 190 200 210 220 230
90 100 110 120 130 140
pF1KB9 TEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQY
::::: :. ::::::: ::::::::::::::.:::::::::::::.:
CCDS76 REGKPEIEGK------------PESEGEPGSETRAAGKRPAEDDVPRKAKRKTNKGLAHY
240 250 260 270 280
150 160 170 180 190 200
pF1KB9 LKQYKEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQKLGAFLWMQRNLQDPFYPRGPRE
::.:::::::::::::::::::::::.:.:..::::::::::::::::::::::::::::
CCDS76 LKEYKEAIHDMNFSNEDMIREFDNMAKVQDEKRKSKQKLGAFLWMQRNLQDPFYPRGPRE
290 300 310 320 330 340
210 220
pF1KB9 FRGGCRAPRRDTEDIPYV
::::::::::: ::::::
CCDS76 FRGGCRAPRRDIEDIPYV
350
>>CCDS35356.1 TCEAL5 gene_id:340543|Hs108|chrX (206 aa)
initn: 1026 init1: 364 opt: 595 Z-score: 435.3 bits: 87.6 E(32554): 6.3e-18
Smith-Waterman score: 616; 45.0% identity (69.4% similar) in 229 aa overlap (1-227:1-206)
10 20 30 40 50 60
pF1KB9 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD
::::..:::: : :. ....: :::: .::.::. :: ::
CCDS35 MEKLYKENEGKPENERNLESE------GKPE-----------DEGSTEDEGKSDEE----
10 20 30
70 80 90 100 110 120
pF1KB9 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES
:::. ::.. ::: : .:. .: . ::. :. :..::: .:.:: .: :...:::
CCDS35 -EKPDMEGKTECEGKREDEGEPGDEGQLEDEGNQEKQGKSEGEDKPQSEGKPASQAKPES
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK
. ::: :::::: .::::::::..: . :. .: ... ..:.:.:.:: ...:....
CCDS35 QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE
100 110 120 130 140 150
190 200 210 220
pF1KB9 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRG--GCRAPRRDTEDIPYV
:: :::.:.: ::::..:::: ::: : :: : ..: ::.:::
CCDS35 LRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQKDLEDVPYV
160 170 180 190 200
>>CCDS14511.1 TCEAL3 gene_id:85012|Hs108|chrX (200 aa)
initn: 817 init1: 372 opt: 560 Z-score: 411.3 bits: 83.2 E(32554): 1.4e-16
Smith-Waterman score: 561; 41.5% identity (65.5% similar) in 229 aa overlap (1-227:1-200)
10 20 30 40 50 60
pF1KB9 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD
::: .:.::: :.:: ..: .: ::: . .
CCDS14 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD----------------------------E
10 20 30
70 80 90 100 110 120
pF1KB9 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES
.:::. ::.. ::: : .:. .: . ::. :. ::.::::.:..: .: :...:::
CCDS14 EEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPES
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB9 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK
. ::: :::::: .::::::::..: . :. .: ... ..:.:.:.:: ...:....
CCDS14 QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE
100 110 120 130 140 150
190 200 210 220
pF1KB9 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRG--GCRAPRRDTEDIPYV
:: :::.:.: ::::..:::: ::: : :: : .: .::::.
CCDS14 LRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL
160 170 180 190 200
>>CCDS43978.1 TCEAL6 gene_id:158931|Hs108|chrX (183 aa)
initn: 637 init1: 347 opt: 473 Z-score: 351.7 bits: 72.0 E(32554): 2.9e-13
Smith-Waterman score: 485; 43.6% identity (66.3% similar) in 202 aa overlap (1-202:1-173)
10 20 30 40 50 60
pF1KB9 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD
::: .:.::: :.:: ..: .: ::: . :..: . ::.:: ::: :
CCDS43 MEKPYNKNEGNLENEGKPEDEVEPDDEGKSD-----EEEKPDAEGKTECEGKRKAE----
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES
:. ::. : ::..: :: :. ::::. :::.: :. .:: :.:
CCDS43 -------GEPGDEGQLEDKGSQEKQGKSEGEGKPQ------GEGKPASQAKPE--GQP--
60 70 80 90
130 140 150 160 170 180
pF1KB9 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK
::: :::: : .::::::::..: . :. .: ... ..:.:.:.:: ...:....
CCDS43 --RAAEKRPAGDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE
100 110 120 130 140 150
190 200 210 220
pF1KB9 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV
:: :::.:.: ::::..::::
CCDS43 LRK-KQKMGGFHWMQRDVQDPFAQGDNGVSGE
160 170 180
227 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:08:04 2016 done: Fri Nov 4 19:08:04 2016
Total Scan time: 2.210 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]