Result of FASTA (omim) for
pF1KB9812
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9812, 257 aa
1>>>pF1KB9812 257 - 257 aa - 257 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1348+/-0.000341; mu= 11.3315+/- 0.021
mean_var=84.2267+/-16.445, 0's: 0 Z-trim(116.8): 30 B-trim: 0 in 0/50
Lambda= 0.139749
statistics sampled from 28281 (28311) to 28281 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.332), width: 16
Scan time: 7.190
The best scores are: opt bits E(85289)
NP_002518 (OMIM: 162660) neurotrophin-3 isoform 2 ( 257) 1721 356.3 3.2e-98
XP_011519265 (OMIM: 162660) PREDICTED: neurotrophi ( 257) 1721 356.3 3.2e-98
NP_001096124 (OMIM: 162660) neurotrophin-3 isoform ( 270) 1721 356.3 3.3e-98
NP_002497 (OMIM: 162030,608654) beta-nerve growth ( 241) 601 130.4 2.9e-30
XP_006710726 (OMIM: 162030,608654) PREDICTED: beta ( 241) 601 130.4 2.9e-30
XP_011539820 (OMIM: 162030,608654) PREDICTED: beta ( 296) 601 130.5 3.4e-30
NP_001137283 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_733929 (OMIM: 113505,164230,209880,607499,61026 ( 247) 574 125.0 1.3e-28
NP_001137286 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_001137279 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_733931 (OMIM: 113505,164230,209880,607499,61026 ( 247) 574 125.0 1.3e-28
NP_001137285 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_733928 (OMIM: 113505,164230,209880,607499,61026 ( 247) 574 125.0 1.3e-28
NP_001137277 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_001137280 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_001700 (OMIM: 113505,164230,209880,607499,61026 ( 247) 574 125.0 1.3e-28
NP_001137288 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_001137284 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_001137278 (OMIM: 113505,164230,209880,607499,61 ( 247) 574 125.0 1.3e-28
NP_733927 (OMIM: 113505,164230,209880,607499,61026 ( 255) 574 125.0 1.3e-28
NP_733930 (OMIM: 113505,164230,209880,607499,61026 ( 262) 574 125.0 1.3e-28
NP_001137281 (OMIM: 113505,164230,209880,607499,61 ( 276) 574 125.0 1.4e-28
NP_001137282 (OMIM: 113505,164230,209880,607499,61 ( 329) 574 125.1 1.6e-28
XP_011518582 (OMIM: 113505,164230,209880,607499,61 ( 329) 574 125.1 1.6e-28
XP_005259019 (OMIM: 162662,613100) PREDICTED: neur ( 210) 502 110.5 2.6e-24
NP_006170 (OMIM: 162662,613100) neurotrophin-4 pre ( 210) 502 110.5 2.6e-24
XP_006723295 (OMIM: 162662,613100) PREDICTED: neur ( 210) 502 110.5 2.6e-24
XP_011525311 (OMIM: 162662,613100) PREDICTED: neur ( 210) 502 110.5 2.6e-24
XP_011525312 (OMIM: 162662,613100) PREDICTED: neur ( 210) 502 110.5 2.6e-24
XP_011525310 (OMIM: 162662,613100) PREDICTED: neur ( 220) 502 110.5 2.7e-24
>>NP_002518 (OMIM: 162660) neurotrophin-3 isoform 2 prep (257 aa)
initn: 1721 init1: 1721 opt: 1721 Z-score: 1884.4 bits: 356.3 E(85289): 3.2e-98
Smith-Waterman score: 1721; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:1-257)
10 20 30 40 50 60
pF1KB9 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 STLPKAEAPREPERGGPAKSAFQPVIAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 STLPKAEAPREPERGGPAKSAFQPVIAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYLM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGEIK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWI
190 200 210 220 230 240
250
pF1KB9 RIDTSCVCALSRKIGRT
:::::::::::::::::
NP_002 RIDTSCVCALSRKIGRT
250
>>XP_011519265 (OMIM: 162660) PREDICTED: neurotrophin-3 (257 aa)
initn: 1721 init1: 1721 opt: 1721 Z-score: 1884.4 bits: 356.3 E(85289): 3.2e-98
Smith-Waterman score: 1721; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:1-257)
10 20 30 40 50 60
pF1KB9 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 STLPKAEAPREPERGGPAKSAFQPVIAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STLPKAEAPREPERGGPAKSAFQPVIAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYLM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGEIK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWI
190 200 210 220 230 240
250
pF1KB9 RIDTSCVCALSRKIGRT
:::::::::::::::::
XP_011 RIDTSCVCALSRKIGRT
250
>>NP_001096124 (OMIM: 162660) neurotrophin-3 isoform 1 p (270 aa)
initn: 1721 init1: 1721 opt: 1721 Z-score: 1884.1 bits: 356.3 E(85289): 3.3e-98
Smith-Waterman score: 1721; 100.0% identity (100.0% similar) in 257 aa overlap (1-257:14-270)
10 20 30 40
pF1KB9 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVTFATILQVNKVMSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNK
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 LSKQMVDVKENYQSTLPKAEAPREPERGGPAKSAFQPVIAMDTELLRQQRRYNSPRVLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSKQMVDVKENYQSTLPKAEAPREPERGGPAKSAFQPVIAMDTELLRQQRRYNSPRVLLS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB9 DSTPLEPPPLYLMEDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVTDKSSAID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSTPLEPPPLYLMEDYVGSPVVANRTSRRKRYAEHKSHRGEYSVCDSESLWVTDKSSAID
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB9 IRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRAL
190 200 210 220 230 240
230 240 250
pF1KB9 TSENNKLVGWRWIRIDTSCVCALSRKIGRT
::::::::::::::::::::::::::::::
NP_001 TSENNKLVGWRWIRIDTSCVCALSRKIGRT
250 260 270
>>NP_002497 (OMIM: 162030,608654) beta-nerve growth fact (241 aa)
initn: 464 init1: 402 opt: 601 Z-score: 664.4 bits: 130.4 E(85289): 2.9e-30
Smith-Waterman score: 634; 42.6% identity (67.4% similar) in 258 aa overlap (1-256:1-239)
10 20 30 40 50 60
pF1KB9 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
::.:::... :.: :::.. .. ..: . :: : .... .
NP_002 MSMLFYTLITAFLIGIQAEPHSESNVPAGHT------IPQAHWTK---------LQHSLD
10 20 30 40
70 80 90 100 110
pF1KB9 STLPKAEAPREPERGGPAKSAFQPV-IAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYL
..: .:.. : . :. : : :..: .:... :: :::::.: . : :
NP_002 TALRRARS--APAAAIAARVAGQTRNITVDPRLFKK-RRLRSPRVLFSTQPPREAADTQD
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB9 MEDYVGSPVVANRTSRRKRYAEHKS-HRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGE
.. ::. . ::: : :: . : ::::.::::: :.:: ::..: ::.:..: ::::
NP_002 LDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB9 IKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWR
.. .:: ::::.::.:.. :: .::::::.::::: : :..:.:.::: .. : ..::
NP_002 VNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWR
170 180 190 200 210 220
240 250
pF1KB9 WIRIDTSCVCALSRKIGRT
.:::::.:::.:::: :
NP_002 FIRIDTACVCVLSRKAVRRA
230 240
>>XP_006710726 (OMIM: 162030,608654) PREDICTED: beta-ner (241 aa)
initn: 464 init1: 402 opt: 601 Z-score: 664.4 bits: 130.4 E(85289): 2.9e-30
Smith-Waterman score: 634; 42.6% identity (67.4% similar) in 258 aa overlap (1-256:1-239)
10 20 30 40 50 60
pF1KB9 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
::.:::... :.: :::.. .. ..: . :: : .... .
XP_006 MSMLFYTLITAFLIGIQAEPHSESNVPAGHT------IPQAHWTK---------LQHSLD
10 20 30 40
70 80 90 100 110
pF1KB9 STLPKAEAPREPERGGPAKSAFQPV-IAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYL
..: .:.. : . :. : : :..: .:... :: :::::.: . : :
XP_006 TALRRARS--APAAAIAARVAGQTRNITVDPRLFKK-RRLRSPRVLFSTQPPREAADTQD
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB9 MEDYVGSPVVANRTSRRKRYAEHKS-HRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGE
.. ::. . ::: : :: . : ::::.::::: :.:: ::..: ::.:..: ::::
XP_006 LDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB9 IKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWR
.. .:: ::::.::.:.. :: .::::::.::::: : :..:.:.::: .. : ..::
XP_006 VNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWR
170 180 190 200 210 220
240 250
pF1KB9 WIRIDTSCVCALSRKIGRT
.:::::.:::.:::: :
XP_006 FIRIDTACVCVLSRKAVRRA
230 240
>>XP_011539820 (OMIM: 162030,608654) PREDICTED: beta-ner (296 aa)
initn: 464 init1: 402 opt: 601 Z-score: 663.1 bits: 130.5 E(85289): 3.4e-30
Smith-Waterman score: 634; 42.6% identity (67.4% similar) in 258 aa overlap (1-256:56-294)
10 20 30
pF1KB9 MSILFYVIFLAYLRGIQGNNMDQRSLPEDS
::.:::... :.: :::.. .. ..:
XP_011 GPKLSSASGPNNSFTKGAAFYPGHTEVHSVMSMLFYTLITAFLIGIQAEPHSESNVPAGH
30 40 50 60 70 80
40 50 60 70 80
pF1KB9 LNSLIIKLIQADILKNKLSKQMVDVKENYQSTLPKAEAPREPERGGPAKSAFQPV-IAMD
. :: : .... ...: .:.. : . :. : : :..:
XP_011 T------IPQAHWTK---------LQHSLDTALRRARS--APAAAIAARVAGQTRNITVD
90 100 110 120
90 100 110 120 130 140
pF1KB9 TELLRQQRRYNSPRVLLSDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRYAEHKS-HRGE
.:... :: :::::.: . : : .. ::. . ::: : :: . : ::::
XP_011 PRLFKK-RRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSKRSSSHPIFHRGE
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB9 YSVCDSESLWVTDKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGI
.::::: :.:: ::..: ::.:..: ::::.. .:: ::::.::.:.. :: .:::::
XP_011 FSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGI
190 200 210 220 230 240
210 220 230 240 250
pF1KB9 DDKHWNSQCKTSQTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGRT
:.::::: : :..:.:.::: .. : ..::.:::::.:::.:::: :
XP_011 DSKHWNSYCTTTHTFVKALTMDG-KQAAWRFIRIDTACVCVLSRKAVRRA
250 260 270 280 290
>>NP_001137283 (OMIM: 113505,164230,209880,607499,610269 (247 aa)
initn: 512 init1: 414 opt: 574 Z-score: 634.9 bits: 125.0 E(85289): 1.3e-28
Smith-Waterman score: 582; 45.5% identity (74.2% similar) in 209 aa overlap (60-256:40-247)
30 40 50 60 70 80
pF1KB9 SLNSLIIKLIQADILKNKLSKQMVDVKENYQSTLPKAEAPREPERGGPA-KSAFQPVIA-
..:: ....:. :: . ..:. ::
NP_001 ISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEE
10 20 30 40 50 60
90 100 110 120 130
pF1KB9 -MDTEL-LRQQRRYN------SPRVLLSDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRY
.: . .: ... : . ::.::...::::: :.:.:.: . .:: . : .:.
NP_001 LLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRH
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB9 AEHKSHRGEYSVCDSESLWVT--DKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKE
.. ..::: ::::: : ::: ::..:.:. : :::: .. .... .:::::::.:.
NP_001 SD-PARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNP
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB9 ARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGRT
.:.:::::: .::::::.:.:.:::::: ...: .:::.:::::::::.:. : ::
NP_001 MGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR
190 200 210 220 230 240
>>NP_733929 (OMIM: 113505,164230,209880,607499,610269) b (247 aa)
initn: 512 init1: 414 opt: 574 Z-score: 634.9 bits: 125.0 E(85289): 1.3e-28
Smith-Waterman score: 582; 45.5% identity (74.2% similar) in 209 aa overlap (60-256:40-247)
30 40 50 60 70 80
pF1KB9 SLNSLIIKLIQADILKNKLSKQMVDVKENYQSTLPKAEAPREPERGGPA-KSAFQPVIA-
..:: ....:. :: . ..:. ::
NP_733 ISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEE
10 20 30 40 50 60
90 100 110 120 130
pF1KB9 -MDTEL-LRQQRRYN------SPRVLLSDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRY
.: . .: ... : . ::.::...::::: :.:.:.: . .:: . : .:.
NP_733 LLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRH
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB9 AEHKSHRGEYSVCDSESLWVT--DKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKE
.. ..::: ::::: : ::: ::..:.:. : :::: .. .... .:::::::.:.
NP_733 SD-PARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNP
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB9 ARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGRT
.:.:::::: .::::::.:.:.:::::: ...: .:::.:::::::::.:. : ::
NP_733 MGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR
190 200 210 220 230 240
>>NP_001137286 (OMIM: 113505,164230,209880,607499,610269 (247 aa)
initn: 512 init1: 414 opt: 574 Z-score: 634.9 bits: 125.0 E(85289): 1.3e-28
Smith-Waterman score: 582; 45.5% identity (74.2% similar) in 209 aa overlap (60-256:40-247)
30 40 50 60 70 80
pF1KB9 SLNSLIIKLIQADILKNKLSKQMVDVKENYQSTLPKAEAPREPERGGPA-KSAFQPVIA-
..:: ....:. :: . ..:. ::
NP_001 ISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEE
10 20 30 40 50 60
90 100 110 120 130
pF1KB9 -MDTEL-LRQQRRYN------SPRVLLSDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRY
.: . .: ... : . ::.::...::::: :.:.:.: . .:: . : .:.
NP_001 LLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRH
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB9 AEHKSHRGEYSVCDSESLWVT--DKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKE
.. ..::: ::::: : ::: ::..:.:. : :::: .. .... .:::::::.:.
NP_001 SD-PARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNP
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB9 ARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGRT
.:.:::::: .::::::.:.:.:::::: ...: .:::.:::::::::.:. : ::
NP_001 MGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR
190 200 210 220 230 240
>>NP_001137279 (OMIM: 113505,164230,209880,607499,610269 (247 aa)
initn: 512 init1: 414 opt: 574 Z-score: 634.9 bits: 125.0 E(85289): 1.3e-28
Smith-Waterman score: 582; 45.5% identity (74.2% similar) in 209 aa overlap (60-256:40-247)
30 40 50 60 70 80
pF1KB9 SLNSLIIKLIQADILKNKLSKQMVDVKENYQSTLPKAEAPREPERGGPA-KSAFQPVIA-
..:: ....:. :: . ..:. ::
NP_001 ISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEE
10 20 30 40 50 60
90 100 110 120 130
pF1KB9 -MDTEL-LRQQRRYN------SPRVLLSDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRY
.: . .: ... : . ::.::...::::: :.:.:.: . .:: . : .:.
NP_001 LLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRH
70 80 90 100 110 120
140 150 160 170 180 190
pF1KB9 AEHKSHRGEYSVCDSESLWVT--DKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKE
.. ..::: ::::: : ::: ::..:.:. : :::: .. .... .:::::::.:.
NP_001 SD-PARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNP
130 140 150 160 170 180
200 210 220 230 240 250
pF1KB9 ARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGRT
.:.:::::: .::::::.:.:.:::::: ...: .:::.:::::::::.:. : ::
NP_001 MGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR
190 200 210 220 230 240
257 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:11:00 2016 done: Fri Nov 4 19:11:01 2016
Total Scan time: 7.190 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]