Result of FASTA (omim) for
pF1KB9825
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9825, 317 aa
1>>>pF1KB9825 317 - 317 aa - 317 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5928+/-0.000311; mu= 5.9602+/- 0.020
mean_var=124.2202+/-24.555, 0's: 0 Z-trim(119.8): 128 B-trim: 0 in 0/56
Lambda= 0.115074
statistics sampled from 34121 (34249) to 34121 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.744), E-opt: 0.2 (0.402), width: 16
Scan time: 8.900
The best scores are: opt bits E(85289)
XP_005274735 (OMIM: 300175) PREDICTED: melanoma-as ( 317) 2062 352.8 5.2e-97
NP_002353 (OMIM: 300175) melanoma-associated antig ( 317) 2062 352.8 5.2e-97
NP_001011550 (OMIM: 300175) melanoma-associated an ( 317) 2062 352.8 5.2e-97
NP_001011549 (OMIM: 300175) melanoma-associated an ( 317) 2062 352.8 5.2e-97
XP_005274736 (OMIM: 300175) PREDICTED: melanoma-as ( 317) 2062 352.8 5.2e-97
NP_001011548 (OMIM: 300175) melanoma-associated an ( 317) 2062 352.8 5.2e-97
XP_005274734 (OMIM: 300175) PREDICTED: melanoma-as ( 397) 2062 352.9 6.3e-97
NP_004979 (OMIM: 300016) melanoma-associated antig ( 309) 1507 260.7 2.8e-69
NP_001159873 (OMIM: 300341) melanoma-associated an ( 318) 1395 242.1 1.1e-63
NP_001159872 (OMIM: 300341) melanoma-associated an ( 318) 1395 242.1 1.1e-63
NP_005355 (OMIM: 300341) melanoma-associated antig ( 318) 1395 242.1 1.1e-63
XP_016885009 (OMIM: 300341) PREDICTED: melanoma-as ( 318) 1395 242.1 1.1e-63
NP_787064 (OMIM: 300176) melanoma-associated antig ( 314) 1387 240.8 2.8e-63
NP_005354 (OMIM: 300176) melanoma-associated antig ( 314) 1387 240.8 2.8e-63
NP_005353 (OMIM: 300174) melanoma-associated antig ( 314) 1376 239.0 9.9e-63
XP_006724881 (OMIM: 300174) PREDICTED: melanoma-as ( 314) 1376 239.0 9.9e-63
XP_005274733 (OMIM: 300174) PREDICTED: melanoma-as ( 314) 1376 239.0 9.9e-63
XP_011529462 (OMIM: 300174) PREDICTED: melanoma-as ( 314) 1376 239.0 9.9e-63
XP_011529463 (OMIM: 300174) PREDICTED: melanoma-as ( 314) 1376 239.0 9.9e-63
NP_001269431 (OMIM: 300173) melanoma-associated an ( 314) 1369 237.8 2.2e-62
NP_001308332 (OMIM: 300549) melanoma-associated an ( 314) 1369 237.8 2.2e-62
XP_016885008 (OMIM: 300173) PREDICTED: melanoma-as ( 314) 1369 237.8 2.2e-62
NP_005352 (OMIM: 300173) melanoma-associated antig ( 314) 1369 237.8 2.2e-62
NP_001308329 (OMIM: 300549) melanoma-associated an ( 314) 1369 237.8 2.2e-62
NP_786884 (OMIM: 300173) melanoma-associated antig ( 314) 1369 237.8 2.2e-62
NP_786885 (OMIM: 300173) melanoma-associated antig ( 314) 1369 237.8 2.2e-62
NP_001269433 (OMIM: 300173) melanoma-associated an ( 314) 1369 237.8 2.2e-62
NP_001269434 (OMIM: 300173) melanoma-associated an ( 314) 1369 237.8 2.2e-62
XP_016884895 (OMIM: 300549) PREDICTED: melanoma-as ( 314) 1369 237.8 2.2e-62
NP_001308331 (OMIM: 300549) melanoma-associated an ( 314) 1369 237.8 2.2e-62
NP_001308333 (OMIM: 300549) melanoma-associated an ( 314) 1369 237.8 2.2e-62
NP_001308330 (OMIM: 300549) melanoma-associated an ( 314) 1369 237.8 2.2e-62
NP_705692 (OMIM: 300549) melanoma-associated antig ( 314) 1369 237.8 2.2e-62
NP_001269430 (OMIM: 300173) melanoma-associated an ( 314) 1369 237.8 2.2e-62
NP_005358 (OMIM: 300177) melanoma-associated antig ( 314) 1368 237.6 2.5e-62
NP_001159858 (OMIM: 300177) melanoma-associated an ( 314) 1368 237.6 2.5e-62
NP_001159859 (OMIM: 300177) melanoma-associated an ( 314) 1368 237.6 2.5e-62
XP_005262392 (OMIM: 300342) PREDICTED: melanoma-as ( 315) 1261 219.9 5.6e-57
XP_005278249 (OMIM: 300764) PREDICTED: melanoma-as ( 315) 1261 219.9 5.6e-57
NP_001074259 (OMIM: 300764) melanoma-associated an ( 315) 1261 219.9 5.6e-57
NP_005356 (OMIM: 300342) melanoma-associated antig ( 315) 1261 219.9 5.6e-57
XP_005278250 (OMIM: 300764) PREDICTED: melanoma-as ( 315) 1261 219.9 5.6e-57
XP_005262391 (OMIM: 300342) PREDICTED: melanoma-as ( 315) 1261 219.9 5.6e-57
XP_016885011 (OMIM: 300344) PREDICTED: melanoma-as ( 394) 1248 217.7 3e-56
NP_001011544 (OMIM: 300344) melanoma-associated an ( 400) 1248 217.7 3.1e-56
XP_011529466 (OMIM: 300344) PREDICTED: melanoma-as ( 421) 1248 217.8 3.2e-56
NP_005357 (OMIM: 300344) melanoma-associated antig ( 429) 1248 217.8 3.2e-56
XP_016885010 (OMIM: 300344) PREDICTED: melanoma-as ( 429) 1248 217.8 3.2e-56
NP_001011543 (OMIM: 300343) melanoma-associated an ( 369) 1012 178.6 1.8e-44
NP_001238757 (OMIM: 300343) melanoma-associated an ( 369) 1012 178.6 1.8e-44
>>XP_005274735 (OMIM: 300175) PREDICTED: melanoma-associ (317 aa)
initn: 2062 init1: 2062 opt: 2062 Z-score: 1862.6 bits: 352.8 E(85289): 5.2e-97
Smith-Waterman score: 2062; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTYTLV
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
XP_005 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPASNTYTLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
250 260 270 280 290 300
310
pF1KB9 AYPSLREAALLEEEEGV
:::::::::::::::::
XP_005 AYPSLREAALLEEEEGV
310
>>NP_002353 (OMIM: 300175) melanoma-associated antigen 4 (317 aa)
initn: 2062 init1: 2062 opt: 2062 Z-score: 1862.6 bits: 352.8 E(85289): 5.2e-97
Smith-Waterman score: 2062; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTYTLV
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
NP_002 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPASNTYTLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
250 260 270 280 290 300
310
pF1KB9 AYPSLREAALLEEEEGV
:::::::::::::::::
NP_002 AYPSLREAALLEEEEGV
310
>>NP_001011550 (OMIM: 300175) melanoma-associated antige (317 aa)
initn: 2062 init1: 2062 opt: 2062 Z-score: 1862.6 bits: 352.8 E(85289): 5.2e-97
Smith-Waterman score: 2062; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTYTLV
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
NP_001 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPASNTYTLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
250 260 270 280 290 300
310
pF1KB9 AYPSLREAALLEEEEGV
:::::::::::::::::
NP_001 AYPSLREAALLEEEEGV
310
>>NP_001011549 (OMIM: 300175) melanoma-associated antige (317 aa)
initn: 2062 init1: 2062 opt: 2062 Z-score: 1862.6 bits: 352.8 E(85289): 5.2e-97
Smith-Waterman score: 2062; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTYTLV
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
NP_001 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPASNTYTLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
250 260 270 280 290 300
310
pF1KB9 AYPSLREAALLEEEEGV
:::::::::::::::::
NP_001 AYPSLREAALLEEEEGV
310
>>XP_005274736 (OMIM: 300175) PREDICTED: melanoma-associ (317 aa)
initn: 2062 init1: 2062 opt: 2062 Z-score: 1862.6 bits: 352.8 E(85289): 5.2e-97
Smith-Waterman score: 2062; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTYTLV
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
XP_005 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPASNTYTLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
250 260 270 280 290 300
310
pF1KB9 AYPSLREAALLEEEEGV
:::::::::::::::::
XP_005 AYPSLREAALLEEEEGV
310
>>NP_001011548 (OMIM: 300175) melanoma-associated antige (317 aa)
initn: 2062 init1: 2062 opt: 2062 Z-score: 1862.6 bits: 352.8 E(85289): 5.2e-97
Smith-Waterman score: 2062; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTYTLV
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
NP_001 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPASNTYTLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
250 260 270 280 290 300
310
pF1KB9 AYPSLREAALLEEEEGV
:::::::::::::::::
NP_001 AYPSLREAALLEEEEGV
310
>>XP_005274734 (OMIM: 300175) PREDICTED: melanoma-associ (397 aa)
initn: 2062 init1: 2062 opt: 2062 Z-score: 1861.1 bits: 352.9 E(85289): 6.3e-97
Smith-Waterman score: 2062; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:81-397)
10 20 30
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQA
::::::::::::::::::::::::::::::
XP_005 QRSTKEKICLWVPIAQLLPALLPAALTRVIMSSEQKSQHCKPEEGVEAQEEALGLVGAQA
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB9 PTTEEQEAAVSSSSPLVPGTLEEVPAAESAGPPQSPQGASALPTTISFTCWRQPNEGSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PTTEEQEAAVSSSSPLVPGTLEEVPAAESAGPPQSPQGASALPTTISFTCWRQPNEGSSS
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB9 QEEEGPSTSPDAESLFREALSNKVDELAHFLLRKYRAKELVTKAEMLERVIKNYKRCFPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QEEEGPSTSPDAESLFREALSNKVDELAHFLLRKYRAKELVTKAEMLERVIKNYKRCFPV
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB9 IFGKASESLKMIFGIDVKEVDPTSNTYTLVTCLGLSYDGLLGNNQIFPKTGLLIIVLGTI
::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_005 IFGKASESLKMIFGIDVKEVDPASNTYTLVTCLGLSYDGLLGNNQIFPKTGLLIIVLGTI
240 250 260 270 280 290
220 230 240 250 260 270
pF1KB9 AMEGDSASEEEIWEELGVMGVYDGREHTVYGEPRKLLTQDWVQENYLEYRQVPGSNPARY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AMEGDSASEEEIWEELGVMGVYDGREHTVYGEPRKLLTQDWVQENYLEYRQVPGSNPARY
300 310 320 330 340 350
280 290 300 310
pF1KB9 EFLWGPRALAETSYVKVLEHVVRVNARVRIAYPSLREAALLEEEEGV
:::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EFLWGPRALAETSYVKVLEHVVRVNARVRIAYPSLREAALLEEEEGV
360 370 380 390
>>NP_004979 (OMIM: 300016) melanoma-associated antigen 1 (309 aa)
initn: 1397 init1: 1397 opt: 1507 Z-score: 1364.8 bits: 260.7 E(85289): 2.8e-69
Smith-Waterman score: 1507; 75.4% identity (88.6% similar) in 317 aa overlap (1-317:1-309)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
:: ::.: ::::::..:::.:::::: .:: :.::::::: :::::::.: :.
NP_004 MSLEQRSLHCKPEEALEAQQEALGLVCVQA--------ATSSSSPLVLGTLEEVPTAGST
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHF
::::::::::.::::.:: :::.:::::.:::::::: ::::: ....:: .:. :
NP_004 DPPQSPQGASAFPTTINFTRQRQPSEGSSSREEEGPSTSCILESLFRAVITKKVADLVGF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 LLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTYTLV
:: ::::.: :::::::: ::::::.::: :::::::::...:::::::.:::...:.::
NP_004 LLLKYRAREPVTKAEMLESVIKNYKHCFPEIFGKASESLQLVFGIDVKEADPTGHSYVLV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 TCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREHTVY
::::::::::::.:::.::::.::::: ::::: : ::::::::.:: :::::::..:
NP_004 TCLGLSYDGLLGDNQIMPKTGFLIIVLVMIAMEGGHAPEEEIWEELSVMEVYDGREHSAY
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 GEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNARVRI
:::::::::: :::.:::::::: :.:::::::::::::::::::::::.:..:.::::.
NP_004 GEPRKLLTQDLVQEKYLEYRQVPDSDPARYEFLWGPRALAETSYVKVLEYVIKVSARVRF
240 250 260 270 280 290
310
pF1KB9 AYPSLREAALLEEEEGV
.:::::::: ::::::
NP_004 FFPSLREAALREEEEGV
300
>>NP_001159873 (OMIM: 300341) melanoma-associated antige (318 aa)
initn: 1298 init1: 1053 opt: 1395 Z-score: 1264.1 bits: 242.1 E(85289): 1.1e-63
Smith-Waterman score: 1395; 71.8% identity (85.4% similar) in 316 aa overlap (5-317:5-318)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::. : :::..:: :: ::. .: ::.:::.:: :::: :. :::::: . :
NP_001 MLLGQKSQRYKAEEGLQAQGEAPGLMDVQIPTAEEQKAA-SSSSTLIMGTLEEVTDSGSP
10 20 30 40 50
70 80 90 100 110
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDA---ESLFREALSNKVDEL
.:::::.:::. :. . : : : .:::::.:::::::::: ::::::::..:: ::
NP_001 SPPQSPEGASSSLTVTDSTLWSQSDEGSSSNEEEGPSTSPDPAHLESLFREALDEKVAEL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 AHFLLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTY
..::::::. :: :::::::: :::::: :: ::.:::: ...:::::::::::....:
NP_001 VRFLLRKYQIKEPVTKAEMLESVIKNYKNHFPDIFSKASECMQVIFGIDVKEVDPAGHSY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 TLVTCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREH
::::::::::::::..: ::::::::::: : :::. : :: ::: :.:::.::::::
NP_001 ILVTCLGLSYDGLLGDDQSTPKTGLLIIVLGMILMEGSRAPEEAIWEALSVMGLYDGREH
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 TVYGEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNAR
.:: . ::::::.:::::::::::.:::.:.:::::::::::::::::::::::::::::
NP_001 SVYWKLRKLLTQEWVQENYLEYRQAPGSDPVRYEFLWGPRALAETSYVKVLEHVVRVNAR
240 250 260 270 280 290
300 310
pF1KB9 VRIAYPSLREAALLEEEEGV
:::.::::.: :: ::.::
NP_001 VRISYPSLHEEAL-GEEKGV
300 310
>>NP_001159872 (OMIM: 300341) melanoma-associated antige (318 aa)
initn: 1298 init1: 1053 opt: 1395 Z-score: 1264.1 bits: 242.1 E(85289): 1.1e-63
Smith-Waterman score: 1395; 71.8% identity (85.4% similar) in 316 aa overlap (5-317:5-318)
10 20 30 40 50 60
pF1KB9 MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESA
::::. : :::..:: :: ::. .: ::.:::.:: :::: :. :::::: . :
NP_001 MLLGQKSQRYKAEEGLQAQGEAPGLMDVQIPTAEEQKAA-SSSSTLIMGTLEEVTDSGSP
10 20 30 40 50
70 80 90 100 110
pF1KB9 GPPQSPQGASALPTTISFTCWRQPNEGSSSQEEEGPSTSPDA---ESLFREALSNKVDEL
.:::::.:::. :. . : : : .:::::.:::::::::: ::::::::..:: ::
NP_001 SPPQSPEGASSSLTVTDSTLWSQSDEGSSSNEEEGPSTSPDPAHLESLFREALDEKVAEL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 AHFLLRKYRAKELVTKAEMLERVIKNYKRCFPVIFGKASESLKMIFGIDVKEVDPTSNTY
..::::::. :: :::::::: :::::: :: ::.:::: ...:::::::::::....:
NP_001 VRFLLRKYQIKEPVTKAEMLESVIKNYKNHFPDIFSKASECMQVIFGIDVKEVDPAGHSY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 TLVTCLGLSYDGLLGNNQIFPKTGLLIIVLGTIAMEGDSASEEEIWEELGVMGVYDGREH
::::::::::::::..: ::::::::::: : :::. : :: ::: :.:::.::::::
NP_001 ILVTCLGLSYDGLLGDDQSTPKTGLLIIVLGMILMEGSRAPEEAIWEALSVMGLYDGREH
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 TVYGEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALAETSYVKVLEHVVRVNAR
.:: . ::::::.:::::::::::.:::.:.:::::::::::::::::::::::::::::
NP_001 SVYWKLRKLLTQEWVQENYLEYRQAPGSDPVRYEFLWGPRALAETSYVKVLEHVVRVNAR
240 250 260 270 280 290
300 310
pF1KB9 VRIAYPSLREAALLEEEEGV
:::.::::.: :: ::.::
NP_001 VRISYPSLHEEAL-GEEKGV
300 310
317 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:29:50 2016 done: Fri Nov 4 19:29:51 2016
Total Scan time: 8.900 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]