Result of FASTA (omim) for
pF1KB9842
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9842, 360 aa
1>>>pF1KB9842 360 - 360 aa - 360 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7663+/-0.000472; mu= 19.7424+/- 0.029
mean_var=117.8381+/-30.751, 0's: 0 Z-trim(110.1): 624 B-trim: 1105 in 1/51
Lambda= 0.118149
statistics sampled from 17666 (18407) to 17666 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.561), E-opt: 0.2 (0.216), width: 16
Scan time: 6.890
The best scores are: opt bits E(85289)
NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 2357 413.6 3.4e-115
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 2357 413.6 3.4e-115
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 2357 413.6 3.4e-115
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 2357 413.6 3.4e-115
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 2357 413.6 3.4e-115
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 2357 413.6 3.4e-115
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 1767 313.1 6.2e-85
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 853 157.3 5.1e-38
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 853 157.3 5.1e-38
NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 827 152.9 1.1e-36
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 827 152.9 1.1e-36
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 827 152.9 1.2e-36
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 827 152.9 1.2e-36
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 811 150.1 7.1e-36
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 811 150.1 7.1e-36
NP_001707 (OMIM: 601613) C-X-C chemokine receptor ( 372) 804 148.9 1.7e-35
NP_116743 (OMIM: 601613) C-X-C chemokine receptor ( 327) 759 141.2 3.1e-33
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 758 141.1 3.8e-33
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 758 141.1 3.8e-33
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 758 141.1 3.8e-33
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 758 141.1 3.8e-33
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 746 139.1 1.6e-32
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 746 139.1 1.6e-32
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 745 138.9 1.7e-32
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 745 138.9 1.7e-32
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 739 137.8 3.3e-32
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 739 137.8 3.5e-32
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 738 137.7 3.9e-32
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 738 137.7 3.9e-32
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 734 137.0 6.6e-32
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 717 134.1 4.7e-31
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 717 134.1 4.7e-31
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 709 132.8 1.2e-30
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 708 132.5 1.4e-30
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 708 132.5 1.4e-30
NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 701 131.4 3.1e-30
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 701 131.4 3.1e-30
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 686 128.8 1.8e-29
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 677 127.3 5.3e-29
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 677 127.3 5.3e-29
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 677 127.3 5.3e-29
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 677 127.3 5.3e-29
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 677 127.3 5.5e-29
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 677 127.3 5.5e-29
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 677 127.4 5.8e-29
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 677 127.4 5.8e-29
NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387) 627 118.8 2.1e-26
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 622 117.9 3.5e-26
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 622 117.9 3.5e-26
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 622 117.9 3.5e-26
>>NP_001548 (OMIM: 146928) C-X-C chemokine receptor type (360 aa)
initn: 2357 init1: 2357 opt: 2357 Z-score: 2189.2 bits: 413.6 E(85289): 3.4e-115
Smith-Waterman score: 2357; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
>>XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemokine (360 aa)
initn: 2357 init1: 2357 opt: 2357 Z-score: 2189.2 bits: 413.6 E(85289): 3.4e-115
Smith-Waterman score: 2357; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
>>NP_001161770 (OMIM: 146928) C-X-C chemokine receptor t (360 aa)
initn: 2357 init1: 2357 opt: 2357 Z-score: 2189.2 bits: 413.6 E(85289): 3.4e-115
Smith-Waterman score: 2357; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
>>XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemokine (360 aa)
initn: 2357 init1: 2357 opt: 2357 Z-score: 2189.2 bits: 413.6 E(85289): 3.4e-115
Smith-Waterman score: 2357; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
>>XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemokine (360 aa)
initn: 2357 init1: 2357 opt: 2357 Z-score: 2189.2 bits: 413.6 E(85289): 3.4e-115
Smith-Waterman score: 2357; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
>>XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemokine (360 aa)
initn: 2357 init1: 2357 opt: 2357 Z-score: 2189.2 bits: 413.6 E(85289): 3.4e-115
Smith-Waterman score: 2357; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
>>NP_000625 (OMIM: 146929,609423) C-X-C chemokine recept (350 aa)
initn: 1757 init1: 1757 opt: 1767 Z-score: 1645.8 bits: 313.1 E(85289): 6.2e-85
Smith-Waterman score: 1767; 78.0% identity (90.5% similar) in 346 aa overlap (15-360:10-350)
10 20 30 40 50 60
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
: .:: :.. .:: : .:: :. .::: :.: ::::::
NP_000 MSNITDPQMWDFDDL-NFT---GMPPADEDYSPCMLETETLNKYVVIIAYALVFL
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
:::::::::::::::::::::::::::::::::::::::.::::.::. ::::. :.::
NP_000 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPF
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
.:::.. . .: ::.::: .::.::.:::.:::::..:::::::..::::::::::::::
NP_000 FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
::::::::::::::::::::::::::::::::::::::::::::.:::::.: :::::::
NP_000 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATE
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
:::.:::::::.:::::::.::::.:::::.:::.::. : . :.. ::: ..:..:
NP_000 ILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYT-SSSVNVSSNL
300 310 320 330 340 350
>>NP_113597 (OMIM: 601835) C-C chemokine receptor type 6 (374 aa)
initn: 602 init1: 236 opt: 853 Z-score: 803.5 bits: 157.3 E(85289): 5.1e-38
Smith-Waterman score: 853; 41.2% identity (73.7% similar) in 335 aa overlap (3-329:7-331)
10 20 30 40 50
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCE-PESLEINKYFVVIIY
.:. :: ::.. . . : :: .: . :: : : .... :: : :
NP_113 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEM---LL----CSLQEVRQFSRLFVPIAY
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 ALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNG-WIF
.:. ...:::: ::.... . . .::.:::::::.:.::.::.::::.::.:...: :.:
NP_113 SLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 GTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLV---KFICLSIWG
.. ::... . .:: :.:::.:::.:::.:::.::... . . :.::: .::
NP_113 SNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWG
120 130 140 150 160 170
180 190 200 210 220
pF1KB9 LSLLLALPVLLFRRTVYSSNVSPAC---YEDMGNNTANWRMLLRILPQSFGFIVPLLIML
::.... ...: . :... : .: :. . .. :..:. : :::..::..:.
NP_113 LSVIISSSTFVFNQK-YNTQGSDVCEPKYQTV-SEPIRWKLLMLGLELLFGFFIPLMFMI
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 FCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCER
::: : ..:: .:. ...:.:.:::.::::.:: : .:.:.:::. : ....:.
NP_113 FCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSCQS
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB9 RNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSF
.. : . .::.:..:: ::::..:::::::::. .::::
NP_113 EKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAG
300 310 320 330 340 350
350 360
pF1KB9 VGSSSGHTSTTL
NP_113 RYSENISRQTSETADNDNASSFTM
360 370
>>NP_004358 (OMIM: 601835) C-C chemokine receptor type 6 (374 aa)
initn: 602 init1: 236 opt: 853 Z-score: 803.5 bits: 157.3 E(85289): 5.1e-38
Smith-Waterman score: 853; 41.2% identity (73.7% similar) in 335 aa overlap (3-329:7-331)
10 20 30 40 50
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCE-PESLEINKYFVVIIY
.:. :: ::.. . . : :: .: . :: : : .... :: : :
NP_004 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEM---LL----CSLQEVRQFSRLFVPIAY
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 ALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNG-WIF
.:. ...:::: ::.... . . .::.:::::::.:.::.::.::::.::.:...: :.:
NP_004 SLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 GTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLV---KFICLSIWG
.. ::... . .:: :.:::.:::.:::.:::.::... . . :.::: .::
NP_004 SNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWG
120 130 140 150 160 170
180 190 200 210 220
pF1KB9 LSLLLALPVLLFRRTVYSSNVSPAC---YEDMGNNTANWRMLLRILPQSFGFIVPLLIML
::.... ...: . :... : .: :. . .. :..:. : :::..::..:.
NP_004 LSVIISSSTFVFNQK-YNTQGSDVCEPKYQTV-SEPIRWKLLMLGLELLFGFFIPLMFMI
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 FCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCER
::: : ..:: .:. ...:.:.:::.::::.:: : .:.:.:::. : ....:.
NP_004 FCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSCQS
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB9 RNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSF
.. : . .::.:..:: ::::..:::::::::. .::::
NP_004 EKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAG
300 310 320 330 340 350
350 360
pF1KB9 VGSSSGHTSTTL
NP_004 RYSENISRQTSETADNDNASSFTM
360 370
>>NP_001495 (OMIM: 300574) C-X-C chemokine receptor type (368 aa)
initn: 829 init1: 388 opt: 827 Z-score: 779.7 bits: 152.9 E(85289): 1.1e-36
Smith-Waterman score: 827; 40.9% identity (67.9% similar) in 340 aa overlap (21-357:25-361)
10 20 30 40 50
pF1KB9 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPE-SLEINKYFVVIIY
:.:.:. . . :: . ::.... :. .:
NP_001 MVLEVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 ALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFG
.:.:::.::::. : :.: :.. : ::..::.::.:: :..::::.::.. . :.::
NP_001 SLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 TFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRYLVKFICLSIWGLSL
. ::::.. : ..:::.: ::::::: :::: :::::. . : . ::..::: :
NP_001 SGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 LLALPVLLFRRTVYSSNVSPA-CYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGF
:.::: ..: . .. .. . : : : ::.: ::..:::.: .::.
NP_001 LFALPDFIFLSAHHDERLNATHCQY---NFPQVGRTALRVLQLVAGFLLPLLVMAYCYAH
190 200 210 220 230
240 250 260 270 280 290
pF1KB9 TLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHID
: .:. .. .. ::::.. .::. : ::: ::.::.:.: :: .. ..: :....:
NP_001 ILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVD
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 RALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSS
: ..: :: .: :::::.:::.: :::. . .: : .. .: .. : ::
NP_001 VAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSW
300 310 320 330 340 350
360
pF1KB9 GHTSTTL
..::
NP_001 SETSEASYSGL
360
360 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:40:15 2016 done: Fri Nov 4 19:40:16 2016
Total Scan time: 6.890 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]