FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9886, 725 aa
  1>>>pF1KB9886 725 - 725 aa - 725 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2819+/-0.000844; mu= 12.0258+/- 0.051
 mean_var=135.7055+/-27.521, 0's: 0 Z-trim(110.6): 10  B-trim: 0 in 0/53
 Lambda= 0.110097
 statistics sampled from 11727 (11730) to 11727 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.703), E-opt: 0.2 (0.36), width:  16
 Scan time:  4.500

The best scores are:                                      opt bits E(32554)
CCDS1593.1 EXOC8 gene_id:149371|Hs108|chr1         ( 725) 4750 766.3       0


>>CCDS1593.1 EXOC8 gene_id:149371|Hs108|chr1              (725 aa)
 initn: 4750 init1: 4750 opt: 4750  Z-score: 4084.0  bits: 766.3 E(32554):    0
Smith-Waterman score: 4750; 100.0% identity (100.0% similar) in 725 aa overlap (1-725:1-725)

               10        20        30        40        50        60
pF1KB9 MAMAMSDSGASRLRRQLESGGFEARLYVKQLSQQSDGDRDLQEHRQRIQALAEETAQNLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MAMAMSDSGASRLRRQLESGGFEARLYVKQLSQQSDGDRDLQEHRQRIQALAEETAQNLK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 RNVYQNYRQFIETAREISYLESEMYQLSHLLTEQKSSLESIPLTLLPAAAAAGAAAASGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 RNVYQNYRQFIETAREISYLESEMYQLSHLLTEQKSSLESIPLTLLPAAAAAGAAAASGG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 EEGVGGAGGRDHLRGQAGFFSTPGGASRDGSGPGEEGKQRTLTTLLEKVEGCRHLLETPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 EEGVGGAGGRDHLRGQAGFFSTPGGASRDGSGPGEEGKQRTLTTLLEKVEGCRHLLETPG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QYLVYNGDLVEYDADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYSLDGLAVVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 QYLVYNGDLVEYDADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYSLDGLAVVN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 VKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEDTKRALSEKRRREQEEAAAPRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 VKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEDTKRALSEKRRREQEEAAAPRG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 PPQVTSKATNPFEDDEEEEPAVPEVEEEKVDLSMEWIQELPEDLDVCIAQRDFEGAVDLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PPQVTSKATNPFEDDEEEEPAVPEVEEEKVDLSMEWIQELPEDLDVCIAQRDFEGAVDLL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 DKLNHYLEDKPSPPPVKELRAKVEERVRQLTEVLVFELSPDRSLRGGPKATRRAVSQLIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 DKLNHYLEDKPSPPPVKELRAKVEERVRQLTEVLVFELSPDRSLRGGPKATRRAVSQLIR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 LGQCTKACELFLRNRAAAVHTAIRQLRIEGATLLYIHKLCHVFFTSLLETAREFEIDFAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LGQCTKACELFLRNRAAAVHTAIRQLRIEGATLLYIHKLCHVFFTSLLETAREFEIDFAG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 TDSGCYSAFVVWARSAMGMFVDAFSKQVFDSKESLSTAAECVKVAKEHCQQLGDIGLDLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 TDSGCYSAFVVWARSAMGMFVDAFSKQVFDSKESLSTAAECVKVAKEHCQQLGDIGLDLT
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB9 FIIHALLVKDIQGALHSYKEIIIEATKHRNSEEMWRRMNLMTPEALGKLKEEMKSCGVSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 FIIHALLVKDIQGALHSYKEIIIEATKHRNSEEMWRRMNLMTPEALGKLKEEMKSCGVSN
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB9 FEQYTGDDCWVNLSYTVVAFTKQTMGFLEEALKLYFPELHMVLLESLVEIILVAVQHVDY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 FEQYTGDDCWVNLSYTVVAFTKQTMGFLEEALKLYFPELHMVLLESLVEIILVAVQHVDY
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB9 SLRCEQDPEKKAFIRQNASFLYETVLPVVEKRFEEGVGKPAKQLQDLRNASRLIRVNPES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SLRCEQDPEKKAFIRQNASFLYETVLPVVEKRFEEGVGKPAKQLQDLRNASRLIRVNPES
              670       680       690       700       710       720

            
pF1KB9 TTSVV
       :::::
CCDS15 TTSVV
            




725 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 20:29:01 2016 done: Sat Nov  5 20:29:02 2016
 Total Scan time:  4.500 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]