Result of FASTA (omim) for
pF1KB9975
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9975, 531 aa
1>>>pF1KB9975 531 - 531 aa - 531 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4167+/-0.00043; mu= 20.5956+/- 0.027
mean_var=115.6264+/-24.662, 0's: 0 Z-trim(113.3): 82 B-trim: 1173 in 1/53
Lambda= 0.119274
statistics sampled from 22553 (22639) to 22553 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.621), E-opt: 0.2 (0.265), width: 16
Scan time: 7.920
The best scores are: opt bits E(85289)
NP_114368 (OMIM: 600693) polypyrimidine tract-bind ( 531) 3427 601.2 2.6e-171
XP_005259655 (OMIM: 600693) PREDICTED: polypyrimid ( 533) 3404 597.2 4e-170
NP_001287918 (OMIM: 608449) polypyrimidine tract-b ( 532) 2615 461.4 3e-129
NP_067013 (OMIM: 608449) polypyrimidine tract-bind ( 531) 2600 458.9 1.8e-128
NP_001287915 (OMIM: 608449) polypyrimidine tract-b ( 540) 2592 457.5 4.7e-128
XP_011540177 (OMIM: 608449) PREDICTED: polypyrimid ( 539) 2577 454.9 2.8e-127
NP_001287919 (OMIM: 608449) polypyrimidine tract-b ( 480) 2430 429.6 1.1e-119
NP_002810 (OMIM: 600693) polypyrimidine tract-bind ( 557) 1941 345.5 2.5e-94
NP_114367 (OMIM: 600693) polypyrimidine tract-bind ( 550) 1931 343.8 8.2e-94
XP_005259654 (OMIM: 600693) PREDICTED: polypyrimid ( 559) 1918 341.5 3.9e-93
NP_001287914 (OMIM: 608449) polypyrimidine tract-b ( 537) 1916 341.2 4.9e-93
NP_001287917 (OMIM: 608449) polypyrimidine tract-b ( 536) 1901 338.6 2.9e-92
XP_011540178 (OMIM: 608449) PREDICTED: polypyrimid ( 545) 1893 337.2 7.6e-92
XP_011540176 (OMIM: 608449) PREDICTED: polypyrimid ( 544) 1878 334.6 4.5e-91
XP_016857440 (OMIM: 608449) PREDICTED: polypyrimid ( 548) 1854 330.5 8e-90
NP_001287916 (OMIM: 608449) polypyrimidine tract-b ( 548) 1854 330.5 8e-90
XP_016870854 (OMIM: 607527) PREDICTED: polypyrimid ( 452) 1203 218.4 3.7e-56
NP_001231825 (OMIM: 607527) polypyrimidine tract-b ( 457) 1203 218.4 3.8e-56
XP_006717409 (OMIM: 607527) PREDICTED: polypyrimid ( 521) 1203 218.5 4.1e-56
NP_001157260 (OMIM: 607527) polypyrimidine tract-b ( 524) 1203 218.5 4.1e-56
NP_005147 (OMIM: 607527) polypyrimidine tract-bind ( 552) 1203 218.5 4.2e-56
NP_001157262 (OMIM: 607527) polypyrimidine tract-b ( 555) 1203 218.5 4.3e-56
NP_001231827 (OMIM: 607527) polypyrimidine tract-b ( 558) 1203 218.5 4.3e-56
XP_011517567 (OMIM: 607527) PREDICTED: polypyrimid ( 561) 1203 218.5 4.3e-56
NP_001231826 (OMIM: 607527) polypyrimidine tract-b ( 547) 943 173.7 1.2e-42
XP_011531467 (OMIM: 611208) PREDICTED: heterogeneo ( 571) 358 73.1 2.6e-12
NP_001136122 (OMIM: 611208) heterogeneous nuclear ( 537) 295 62.2 4.5e-09
NP_612403 (OMIM: 611208) heterogeneous nuclear rib ( 542) 295 62.2 4.5e-09
XP_011531468 (OMIM: 611208) PREDICTED: heterogeneo ( 570) 295 62.3 4.7e-09
XP_005264697 (OMIM: 611208) PREDICTED: heterogeneo ( 590) 295 62.3 4.8e-09
XP_005264696 (OMIM: 611208) PREDICTED: heterogeneo ( 595) 295 62.3 4.8e-09
NP_001005335 (OMIM: 603083) heterogeneous nuclear ( 456) 271 58.0 7.1e-08
XP_011525191 (OMIM: 603083) PREDICTED: heterogeneo ( 456) 271 58.0 7.1e-08
XP_011525188 (OMIM: 603083) PREDICTED: heterogeneo ( 518) 271 58.1 7.7e-08
XP_011525189 (OMIM: 603083) PREDICTED: heterogeneo ( 532) 271 58.1 7.8e-08
NP_001524 (OMIM: 603083) heterogeneous nuclear rib ( 589) 271 58.1 8.4e-08
XP_011525190 (OMIM: 603083) PREDICTED: heterogeneo ( 528) 257 55.7 4.1e-07
XP_011537999 (OMIM: 613171,613172) PREDICTED: RNA- (1099) 257 56.1 6.7e-07
XP_016871593 (OMIM: 613171,613172) PREDICTED: RNA- (1099) 257 56.1 6.7e-07
XP_016871592 (OMIM: 613171,613172) PREDICTED: RNA- (1172) 257 56.1 6.9e-07
NP_001127835 (OMIM: 613171,613172) RNA-binding pro (1227) 257 56.1 7.1e-07
NP_001269207 (OMIM: 164015,606070) matrin-3 isofor ( 509) 195 45.0 0.00066
NP_001181885 (OMIM: 164015,606070) matrin-3 isofor ( 559) 195 45.0 0.0007
NP_001181883 (OMIM: 164015,606070) matrin-3 isofor ( 847) 195 45.3 0.00092
NP_001181884 (OMIM: 164015,606070) matrin-3 isofor ( 847) 195 45.3 0.00092
NP_954659 (OMIM: 164015,606070) matrin-3 isoform a ( 847) 195 45.3 0.00092
NP_061322 (OMIM: 164015,606070) matrin-3 isoform a ( 847) 195 45.3 0.00092
XP_011539196 (OMIM: 168360) PREDICTED: ELAV-like p ( 379) 180 42.3 0.0033
XP_011539197 (OMIM: 168360) PREDICTED: ELAV-like p ( 379) 180 42.3 0.0033
NP_068771 (OMIM: 168360) ELAV-like protein 4 isofo ( 380) 180 42.3 0.0033
>>NP_114368 (OMIM: 600693) polypyrimidine tract-binding (531 aa)
initn: 3427 init1: 3427 opt: 3427 Z-score: 3196.6 bits: 601.2 E(85289): 2.6e-171
Smith-Waterman score: 3427; 100.0% identity (100.0% similar) in 531 aa overlap (1-531:1-531)
10 20 30 40 50 60
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILFGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 VPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILFGV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 YGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPREG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 YGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPREG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 QEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 QEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGV
430 440 450 460 470 480
490 500 510 520 530
pF1KB9 VKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 VKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI
490 500 510 520 530
>>XP_005259655 (OMIM: 600693) PREDICTED: polypyrimidine (533 aa)
initn: 3404 init1: 3404 opt: 3404 Z-score: 3175.2 bits: 597.2 E(85289): 4e-170
Smith-Waterman score: 3404; 100.0% identity (100.0% similar) in 528 aa overlap (4-531:6-533)
10 20 30 40 50
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRAGSIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 RVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 PVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 GQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 LSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB9 LSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILF
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB9 GVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB9 EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNG
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB9 GVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI
490 500 510 520 530
>>NP_001287918 (OMIM: 608449) polypyrimidine tract-bindi (532 aa)
initn: 1888 init1: 1190 opt: 2615 Z-score: 2441.5 bits: 461.4 E(85289): 3e-129
Smith-Waterman score: 2615; 75.0% identity (92.3% similar) in 535 aa overlap (1-531:1-532)
10 20 30 40 50 60
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
::::: ..:::.:::::::.: : ..: :. . .:::::::::::... :.::::
NP_001 MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDSKKFKGEDKMDGAPSRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
.:::::: .::: :::.::::::::::.::::::::::.:. ::::: ::::::..:::
NP_001 LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
::.::::::.:::::::::.. :: ::::.::::..::..: : :...:. . . .:
NP_001 LRNQPIYIQYSNHKELKTDNTLNQ-RAQAVLQAVTAVQTANTPL--SGTTVSESAVTPAQ
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
:::::::..:..::::::::::::::::.:::::::::::::::::::.:::.::.:::.
NP_001 SPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLA
180 190 200 210 220 230
250 260 270 280 290
pF1KB9 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG--
::::::::::::::::::::..::::::::::::::::::::::.::.:: ..::::.
NP_001 LDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 LSVPNVHGALAPLAIPSAAAAAAAA--GRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFI
:. : :::.:::::.:::::::: ::...::....::.:::::::: : :::::::
NP_001 TSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFT
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB9 LFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQL
::::::::::::::.:::..::.:::::::.::::.::::.:..:: ::.::::::.:::
NP_001 LFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQL
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB9 PREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSS
:::: .:::::::.:::::::::::::::::::::::::::::::::::.::::..::..
NP_001 PREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFAN
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB9 NGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI
.::.::.:::::.:.::::.::..::::.::::::::..::::::::::::::::
NP_001 TGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
480 490 500 510 520 530
>>NP_067013 (OMIM: 608449) polypyrimidine tract-binding (531 aa)
initn: 2424 init1: 954 opt: 2600 Z-score: 2427.5 bits: 458.9 E(85289): 1.8e-128
Smith-Waterman score: 2600; 75.0% identity (92.1% similar) in 535 aa overlap (1-531:1-531)
10 20 30 40 50 60
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
::::: ..:::.:::::::.: : ..: :. . .:::::::::::... :.::::
NP_067 MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDSKKFKGEDKMDGAPSRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
.:::::: .::: :::.::::::::::.::::::::::.:. ::::: ::::::..:::
NP_067 LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
::.::::::.:::::::::.. :: ::::.::::..::..: : :...:. . . .:
NP_067 LRNQPIYIQYSNHKELKTDNTLNQ-RAQAVLQAVTAVQTANTPL--SGTTVSESAVTPAQ
130 140 150 160 170
190 200 210 220 230 240
pF1KB9 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
:::::::..:..::::::::::::::::.:::::::::::::::::::.:::.::.:::.
NP_067 SPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLA
180 190 200 210 220 230
250 260 270 280 290
pF1KB9 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG--
::::::::::::::::::::..::::::::::::::::::::::.::.:: ..::::.
NP_067 LDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 LSVPNVHGALAPLAIPSAAAAAAAA--GRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFI
:. : :::.:::::.:::::::: ::...::....::.:::::::: : :::::::
NP_067 TSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFT
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB9 LFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQL
::::::::::::::.:::..::.:::::::.::::.::::.:..:: ::.::::::.:::
NP_067 LFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQL
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB9 PREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSS
:::: .:::::::.:::::::::::::::::::::::::::::::::::.::::..::..
NP_067 PREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFAN
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB9 NGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI
.::.::.::::: :.::::.::..::::.::::::::..::::::::::::::::
NP_067 TGGTVKAFKFFQ-DHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
480 490 500 510 520 530
>>NP_001287915 (OMIM: 608449) polypyrimidine tract-bindi (540 aa)
initn: 1865 init1: 1190 opt: 2592 Z-score: 2420.0 bits: 457.5 E(85289): 4.7e-128
Smith-Waterman score: 2592; 74.8% identity (92.3% similar) in 532 aa overlap (4-531:12-540)
10 20 30 40 50
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSR
:: ..:::.:::::::.: : ..: :. . .:::::::::::...
NP_001 MDGYVIGPARRIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDSKKFKGEDK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 SAGVPSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN
:.::::.:::::: .::: :::.::::::::::.::::::::::.:. ::::: ::::
NP_001 MDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 YYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVD
::..::: ::.::::::.:::::::::.. :: ::::.::::..::..: : :...:.
NP_001 YYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQ-RAQAVLQAVTAVQTANTPL--SGTTVS
130 140 150 160 170
180 190 200 210 220 230
pF1KB9 AGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV
. . .::::::::..:..::::::::::::::::.:::::::::::::::::::.:::
NP_001 ESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 SAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQT
.::.:::.::::::::::::::::::::..::::::::::::::::::::::.::.:: .
NP_001 NAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPA
240 250 260 270 280 290
300 310 320 330 340
pF1KB9 MAAAFG--LSVPNVHGALAPLAIPSAAAAAAAA--GRIAIPGLAGAGNSVLLVSNLNPER
.::::. :. : :::.:::::.:::::::: ::...::....::.:::::::: :
NP_001 IAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEM
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 VTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITL
::::::: ::::::::::::::.:::..::.:::::::.::::.::::.:..:: ::.::
NP_001 VTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTL
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB9 SKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEE
::::.::::::: .:::::::.:::::::::::::::::::::::::::::::::::.::
NP_001 SKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEE
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB9 DLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK
::..::...::.::.:::::.:.::::.::..::::.::::::::..:::::::::::::
NP_001 DLRTLFANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSK
480 490 500 510 520 530
530
pF1KB9 STI
:::
NP_001 STI
540
>>XP_011540177 (OMIM: 608449) PREDICTED: polypyrimidine (539 aa)
initn: 2401 init1: 954 opt: 2577 Z-score: 2406.1 bits: 454.9 E(85289): 2.8e-127
Smith-Waterman score: 2577; 74.8% identity (92.1% similar) in 532 aa overlap (4-531:12-539)
10 20 30 40 50
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSR
:: ..:::.:::::::.: : ..: :. . .:::::::::::...
XP_011 MDGYVIGPARRIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDSKKFKGEDK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 SAGVPSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN
:.::::.:::::: .::: :::.::::::::::.::::::::::.:. ::::: ::::
XP_011 MDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 YYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVD
::..::: ::.::::::.:::::::::.. :: ::::.::::..::..: : :...:.
XP_011 YYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQ-RAQAVLQAVTAVQTANTPL--SGTTVS
130 140 150 160 170
180 190 200 210 220 230
pF1KB9 AGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPV
. . .::::::::..:..::::::::::::::::.:::::::::::::::::::.:::
XP_011 ESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 SAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQT
.::.:::.::::::::::::::::::::..::::::::::::::::::::::.::.:: .
XP_011 NAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPA
240 250 260 270 280 290
300 310 320 330 340
pF1KB9 MAAAFG--LSVPNVHGALAPLAIPSAAAAAAAA--GRIAIPGLAGAGNSVLLVSNLNPER
.::::. :. : :::.:::::.:::::::: ::...::....::.:::::::: :
XP_011 IAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEM
300 310 320 330 340 350
350 360 370 380 390 400
pF1KB9 VTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITL
::::::: ::::::::::::::.:::..::.:::::::.::::.::::.:..:: ::.::
XP_011 VTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTL
360 370 380 390 400 410
410 420 430 440 450 460
pF1KB9 SKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEE
::::.::::::: .:::::::.:::::::::::::::::::::::::::::::::::.::
XP_011 SKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEE
420 430 440 450 460 470
470 480 490 500 510 520
pF1KB9 DLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK
::..::...::.::.::::: :.::::.::..::::.::::::::..:::::::::::::
XP_011 DLRTLFANTGGTVKAFKFFQ-DHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSK
480 490 500 510 520 530
530
pF1KB9 STI
:::
XP_011 STI
>>NP_001287919 (OMIM: 608449) polypyrimidine tract-bindi (480 aa)
initn: 1703 init1: 1190 opt: 2430 Z-score: 2269.9 bits: 429.6 E(85289): 1.1e-119
Smith-Waterman score: 2430; 77.1% identity (94.0% similar) in 481 aa overlap (55-531:3-480)
30 40 50 60 70 80
pF1KB9 TNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRVIHIRKLPIDVTEGEVISLGLPFGK
:.::::.:::::: .::: :::.:::::::
NP_001 MDGAPSRVLHIRKLPGEVTETEVIALGLPFGK
10 20 30
90 100 110 120 130 140
pF1KB9 VTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQ
:::.::::::::::.:. ::::: ::::::..::: ::.::::::.:::::::::.. ::
NP_001 VTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQ
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB9 ARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIF
::::.::::..::..: : :...:. . . .::::::::..:..::::::::::::
NP_001 -RAQAVLQAVTAVQTANTPL--SGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIF
100 110 120 130 140
210 220 230 240 250 260
pF1KB9 SKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLN
::::.:::::::::::::::::::.:::.::.:::.::::::::::::::::::::..::
NP_001 SKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLN
150 160 170 180 190 200
270 280 290 300 310 320
pF1KB9 VKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG--LSVPNVHGALAPLAIPSAAAAAAA
::::::::::::::::::::.::.:: ..::::. :. : :::.:::::.:::::::
NP_001 VKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAA
210 220 230 240 250 260
330 340 350 360 370 380
pF1KB9 A--GRIAIPGLAGAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQ
: ::...::....::.:::::::: : ::::::: ::::::::::::::.:::..::.:
NP_001 AAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQ
270 280 290 300 310 320
390 400 410 420 430 440
pF1KB9 MADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKK
::::::.::::.::::.:..:: ::.::::::.::::::: .:::::::.::::::::::
NP_001 MADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKK
330 340 350 360 370 380
450 460 470 480 490 500
pF1KB9 PGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGS
:::::::::::::::::::::::::.::::..::...::.::.:::::.:.::::.::..
NP_001 PGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMAT
390 400 410 420 430 440
510 520 530
pF1KB9 VEEAVQALIDLHNHDLGENHHLRVSFSKSTI
::::.::::::::..::::::::::::::::
NP_001 VEEAIQALIDLHNYNLGENHHLRVSFSKSTI
450 460 470 480
>>NP_002810 (OMIM: 600693) polypyrimidine tract-binding (557 aa)
initn: 1918 init1: 1918 opt: 1941 Z-score: 1814.4 bits: 345.5 E(85289): 2.5e-94
Smith-Waterman score: 3365; 95.3% identity (95.3% similar) in 557 aa overlap (1-531:1-557)
10 20 30 40 50 60
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
250 260 270 280 290 300
300 310 320 330
pF1KB9 ------------------------LSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA
::::::::::::::::::::::::::::::::::::
NP_002 GIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB9 GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHL
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB9 NGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 NGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB9 TLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNH
490 500 510 520 530 540
520 530
pF1KB9 DLGENHHLRVSFSKSTI
:::::::::::::::::
NP_002 DLGENHHLRVSFSKSTI
550
>>NP_114367 (OMIM: 600693) polypyrimidine tract-binding (550 aa)
initn: 1902 init1: 1902 opt: 1931 Z-score: 1805.2 bits: 343.8 E(85289): 8.2e-94
Smith-Waterman score: 3379; 96.5% identity (96.5% similar) in 550 aa overlap (1-531:1-550)
10 20 30 40 50 60
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
190 200 210 220 230 240
250 260 270 280 290
pF1KB9 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAF---
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFASP
250 260 270 280 290 300
300 310 320 330 340
pF1KB9 ----------------GLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLV
::::::::::::::::::::::::::::::::::::::::::::
NP_114 YAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLV
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB9 SNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHG
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB9 KPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 KPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNI
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB9 PPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 PPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHH
490 500 510 520 530 540
530
pF1KB9 LRVSFSKSTI
::::::::::
NP_114 LRVSFSKSTI
550
>>XP_005259654 (OMIM: 600693) PREDICTED: polypyrimidine (559 aa)
initn: 1895 init1: 1895 opt: 1918 Z-score: 1793.0 bits: 341.5 E(85289): 3.9e-93
Smith-Waterman score: 3342; 95.3% identity (95.3% similar) in 554 aa overlap (4-531:6-559)
10 20 30 40 50
pF1KB9 MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRAGSIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 RVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 PVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 GQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB9 LSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFG
250 260 270 280 290 300
300 310 320 330
pF1KB9 --------------------------LSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLA
::::::::::::::::::::::::::::::::::
XP_005 APGIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLA
310 320 330 340 350 360
340 350 360 370 380 390
pF1KB9 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KB9 HLNGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HLNGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KB9 SATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLH
490 500 510 520 530 540
520 530
pF1KB9 NHDLGENHHLRVSFSKSTI
:::::::::::::::::::
XP_005 NHDLGENHHLRVSFSKSTI
550
531 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:58:55 2016 done: Fri Nov 4 08:58:56 2016
Total Scan time: 7.920 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]