Result of FASTA (ccds) for
pF1KB9986
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9986, 712 aa
1>>>pF1KB9986 712 - 712 aa - 712 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3818+/-0.00107; mu= 14.5917+/- 0.064
mean_var=80.3737+/-16.226, 0's: 0 Z-trim(103.5): 22 B-trim: 0 in 0/50
Lambda= 0.143060
statistics sampled from 7445 (7450) to 7445 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.229), width: 16
Scan time: 2.540
The best scores are: opt bits E(32554)
CCDS5012.1 ORC3 gene_id:23595|Hs108|chr6 ( 712) 4673 974.7 0
CCDS43486.1 ORC3 gene_id:23595|Hs108|chr6 ( 711) 4656 971.2 0
CCDS56440.1 ORC3 gene_id:23595|Hs108|chr6 ( 568) 3716 777.2 0
>>CCDS5012.1 ORC3 gene_id:23595|Hs108|chr6 (712 aa)
initn: 4673 init1: 4673 opt: 4673 Z-score: 5210.9 bits: 974.7 E(32554): 0
Smith-Waterman score: 4673; 100.0% identity (100.0% similar) in 712 aa overlap (1-712:1-712)
10 20 30 40 50 60
pF1KB9 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 SYCENHLGSTAKRIEEFLAQFQSLDAETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 SYCENHLGSTAKRIEEFLAQFQSLDAETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKEL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB9 RRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 RRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIAL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB9 HTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 HTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAA
610 620 630 640 650 660
670 680 690 700 710
pF1KB9 EKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS50 EKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
670 680 690 700 710
>>CCDS43486.1 ORC3 gene_id:23595|Hs108|chr6 (711 aa)
initn: 3331 init1: 3331 opt: 4656 Z-score: 5191.9 bits: 971.2 E(32554): 0
Smith-Waterman score: 4656; 99.9% identity (99.9% similar) in 712 aa overlap (1-712:1-711)
10 20 30 40 50 60
pF1KB9 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MATSSMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQEELNKNLFDNLIEFLQKSHSGFQKNSRDLGGQIKLREIPTAALVLGVNVTDHDLTFGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVTQRKTHYS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDFIIISSQH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLLLTTQFPF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKRRINFLSN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYFLVLRCLH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILEKCFKVFK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 SYCENHLGSTAKRIEEFLAQFQSLDAETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKEL
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS43 SYCENHLGSTAKRIEEFLAQFQSLD-ETKEEEDASGSQPKGLQKTDLYHLQKSLLEMKEL
490 500 510 520 530
550 560 570 580 590 600
pF1KB9 RRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIAL
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB9 HTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 HTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAA
600 610 620 630 640 650
670 680 690 700 710
pF1KB9 EKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
660 670 680 690 700 710
>>CCDS56440.1 ORC3 gene_id:23595|Hs108|chr6 (568 aa)
initn: 2391 init1: 2391 opt: 3716 Z-score: 4145.0 bits: 777.2 E(32554): 0
Smith-Waterman score: 3716; 99.8% identity (99.8% similar) in 569 aa overlap (144-712:1-568)
120 130 140 150 160 170
pF1KB9 HDLTFGSLTEALQNNVTPYVVSLQAKDCPDMKHFLQKLISQLMDCCVDIKSKEEESVHVT
::::::::::::::::::::::::::::::
CCDS56 MKHFLQKLISQLMDCCVDIKSKEEESVHVT
10 20 30
180 190 200 210 220 230
pF1KB9 QRKTHYSMDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QRKTHYSMDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILKDMESFATKVLQDF
40 50 60 70 80 90
240 250 260 270 280 290
pF1KB9 IIISSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IIISSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLSCKEHLTTVLDKLL
100 110 120 130 140 150
300 310 320 330 340 350
pF1KB9 LTTQFPFKINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LTTQFPFKINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQPLSVLCCNLPEAKR
160 170 180 190 200 210
360 370 380 390 400 410
pF1KB9 RINFLSNNQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 RINFLSNNQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQLLLENLHVYHMNYF
220 230 240 250 260 270
420 430 440 450 460 470
pF1KB9 LVLRCLHKFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LVLRCLHKFTSSLPKYPLGRQIRELYCTCLEKNIWDSEEYASVLQLLRMLAKDELMTILE
280 290 300 310 320 330
480 490 500 510 520 530
pF1KB9 KCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDAETKEEEDASGSQPKGLQKTDLYHLQKS
:::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS56 KCFKVFKSYCENHLGSTAKRIEEFLAQFQSLD-ETKEEEDASGSQPKGLQKTDLYHLQKS
340 350 360 370 380
540 550 560 570 580 590
pF1KB9 LLEMKELRRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 LLEMKELRRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLN
390 400 410 420 430 440
600 610 620 630 640 650
pF1KB9 AAPRIALHTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AAPRIALHTALNNPYYYLKNEALKSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAF
450 460 470 480 490 500
660 670 680 690 700 710
pF1KB9 ATVVTAAEKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ATVVTAAEKMDANSATSEEMNEIIHARFIRAVSELELLGFIKPTKQKTDHVARLTWGGC
510 520 530 540 550 560
712 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:04:53 2016 done: Sat Nov 5 16:04:53 2016
Total Scan time: 2.540 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]