Result of FASTA (omim) for
pF1KE0004
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0004, 486 aa
1>>>pF1KE0004 486 - 486 aa - 486 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2484+/-0.000351; mu= 18.4465+/- 0.022
mean_var=71.4285+/-14.930, 0's: 0 Z-trim(115.0): 20 B-trim: 831 in 1/49
Lambda= 0.151753
statistics sampled from 25139 (25159) to 25139 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.295), width: 16
Scan time: 8.870
The best scores are: opt bits E(85289)
NP_060017 (OMIM: 252010,256000,613622) FAD-depende ( 486) 3290 729.6 4.7e-210
XP_016873489 (OMIM: 252010,256000,613622) PREDICTE ( 485) 3271 725.4 8.5e-209
XP_016873490 (OMIM: 252010,256000,613622) PREDICTE ( 316) 2169 484.0 2.6e-136
XP_011541197 (OMIM: 252010,256000,613622) PREDICTE ( 316) 2169 484.0 2.6e-136
XP_011541198 (OMIM: 252010,256000,613622) PREDICTE ( 316) 2169 484.0 2.6e-136
XP_016873491 (OMIM: 252010,256000,613622) PREDICTE ( 316) 2169 484.0 2.6e-136
XP_006718942 (OMIM: 252010,256000,613622) PREDICTE ( 316) 2169 484.0 2.6e-136
XP_016873492 (OMIM: 252010,256000,613622) PREDICTE ( 275) 1900 425.1 1.2e-118
XP_016873494 (OMIM: 252010,256000,613622) PREDICTE ( 275) 1900 425.1 1.2e-118
XP_006718944 (OMIM: 252010,256000,613622) PREDICTE ( 275) 1900 425.1 1.2e-118
XP_016873493 (OMIM: 252010,256000,613622) PREDICTE ( 275) 1900 425.1 1.2e-118
XP_016873495 (OMIM: 252010,256000,613622) PREDICTE ( 274) 1881 420.9 2.2e-117
XP_016880211 (OMIM: 616713) PREDICTED: peroxisomal ( 294) 157 43.5 0.00096
NP_057602 (OMIM: 616713) peroxisomal sarcosine oxi ( 390) 157 43.6 0.0012
>>NP_060017 (OMIM: 252010,256000,613622) FAD-dependent o (486 aa)
initn: 3290 init1: 3290 opt: 3290 Z-score: 3892.1 bits: 729.6 E(85289): 4.7e-210
Smith-Waterman score: 3290; 100.0% identity (100.0% similar) in 486 aa overlap (1-486:1-486)
10 20 30 40 50 60
pF1KE0 MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 GGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 GGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 VVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKI
430 440 450 460 470 480
pF1KE0 QENNII
::::::
NP_060 QENNII
>>XP_016873489 (OMIM: 252010,256000,613622) PREDICTED: F (485 aa)
initn: 2499 init1: 2476 opt: 3271 Z-score: 3869.6 bits: 725.4 E(85289): 8.5e-209
Smith-Waterman score: 3271; 99.8% identity (99.8% similar) in 486 aa overlap (1-486:1-485)
10 20 30 40 50 60
pF1KE0 MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 GGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNG
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGRSPTE-EEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNG
370 380 390 400 410
430 440 450 460 470 480
pF1KE0 VVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKI
420 430 440 450 460 470
pF1KE0 QENNII
::::::
XP_016 QENNII
480
>>XP_016873490 (OMIM: 252010,256000,613622) PREDICTED: F (316 aa)
initn: 2169 init1: 2169 opt: 2169 Z-score: 2568.3 bits: 484.0 E(85289): 2.6e-136
Smith-Waterman score: 2169; 100.0% identity (100.0% similar) in 316 aa overlap (171-486:1-316)
150 160 170 180 190 200
pF1KE0 YLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWI
::::::::::::::::::::::::::::::
XP_016 MESNVKVQRQEGAKVSLMSPDQLRNKFPWI
10 20 30
210 220 230 240 250 260
pF1KE0 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
220 230 240 250 260 270
450 460 470 480
pF1KE0 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
280 290 300 310
>>XP_011541197 (OMIM: 252010,256000,613622) PREDICTED: F (316 aa)
initn: 2169 init1: 2169 opt: 2169 Z-score: 2568.3 bits: 484.0 E(85289): 2.6e-136
Smith-Waterman score: 2169; 100.0% identity (100.0% similar) in 316 aa overlap (171-486:1-316)
150 160 170 180 190 200
pF1KE0 YLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWI
::::::::::::::::::::::::::::::
XP_011 MESNVKVQRQEGAKVSLMSPDQLRNKFPWI
10 20 30
210 220 230 240 250 260
pF1KE0 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
220 230 240 250 260 270
450 460 470 480
pF1KE0 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
280 290 300 310
>>XP_011541198 (OMIM: 252010,256000,613622) PREDICTED: F (316 aa)
initn: 2169 init1: 2169 opt: 2169 Z-score: 2568.3 bits: 484.0 E(85289): 2.6e-136
Smith-Waterman score: 2169; 100.0% identity (100.0% similar) in 316 aa overlap (171-486:1-316)
150 160 170 180 190 200
pF1KE0 YLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWI
::::::::::::::::::::::::::::::
XP_011 MESNVKVQRQEGAKVSLMSPDQLRNKFPWI
10 20 30
210 220 230 240 250 260
pF1KE0 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
220 230 240 250 260 270
450 460 470 480
pF1KE0 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
280 290 300 310
>>XP_016873491 (OMIM: 252010,256000,613622) PREDICTED: F (316 aa)
initn: 2169 init1: 2169 opt: 2169 Z-score: 2568.3 bits: 484.0 E(85289): 2.6e-136
Smith-Waterman score: 2169; 100.0% identity (100.0% similar) in 316 aa overlap (171-486:1-316)
150 160 170 180 190 200
pF1KE0 YLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWI
::::::::::::::::::::::::::::::
XP_016 MESNVKVQRQEGAKVSLMSPDQLRNKFPWI
10 20 30
210 220 230 240 250 260
pF1KE0 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
220 230 240 250 260 270
450 460 470 480
pF1KE0 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
280 290 300 310
>>XP_006718942 (OMIM: 252010,256000,613622) PREDICTED: F (316 aa)
initn: 2169 init1: 2169 opt: 2169 Z-score: 2568.3 bits: 484.0 E(85289): 2.6e-136
Smith-Waterman score: 2169; 100.0% identity (100.0% similar) in 316 aa overlap (171-486:1-316)
150 160 170 180 190 200
pF1KE0 YLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWI
::::::::::::::::::::::::::::::
XP_006 MESNVKVQRQEGAKVSLMSPDQLRNKFPWI
10 20 30
210 220 230 240 250 260
pF1KE0 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKA
40 50 60 70 80 90
270 280 290 300 310 320
pF1KE0 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVE
100 110 120 130 140 150
330 340 350 360 370 380
pF1KE0 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDH
160 170 180 190 200 210
390 400 410 420 430 440
pF1KE0 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGH
220 230 240 250 260 270
450 460 470 480
pF1KE0 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII
280 290 300 310
>>XP_016873492 (OMIM: 252010,256000,613622) PREDICTED: F (275 aa)
initn: 1900 init1: 1900 opt: 1900 Z-score: 2250.9 bits: 425.1 E(85289): 1.2e-118
Smith-Waterman score: 1900; 100.0% identity (100.0% similar) in 275 aa overlap (212-486:1-275)
190 200 210 220 230 240
pF1KE0 GAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQG
::::::::::::::::::::::::::::::
XP_016 MEDEGWFDPWCLLQGLRRKVQSLGVLFCQG
10 20 30
250 260 270 280 290 300
pF1KE0 EVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAAL
40 50 60 70 80 90
310 320 330 340 350 360
pF1KE0 AGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLG
100 110 120 130 140 150
370 380 390 400 410 420
pF1KE0 GRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGV
160 170 180 190 200 210
430 440 450 460 470 480
pF1KE0 VGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQ
220 230 240 250 260 270
pF1KE0 ENNII
:::::
XP_016 ENNII
>>XP_016873494 (OMIM: 252010,256000,613622) PREDICTED: F (275 aa)
initn: 1900 init1: 1900 opt: 1900 Z-score: 2250.9 bits: 425.1 E(85289): 1.2e-118
Smith-Waterman score: 1900; 100.0% identity (100.0% similar) in 275 aa overlap (212-486:1-275)
190 200 210 220 230 240
pF1KE0 GAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQG
::::::::::::::::::::::::::::::
XP_016 MEDEGWFDPWCLLQGLRRKVQSLGVLFCQG
10 20 30
250 260 270 280 290 300
pF1KE0 EVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAAL
40 50 60 70 80 90
310 320 330 340 350 360
pF1KE0 AGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLG
100 110 120 130 140 150
370 380 390 400 410 420
pF1KE0 GRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGV
160 170 180 190 200 210
430 440 450 460 470 480
pF1KE0 VGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQ
220 230 240 250 260 270
pF1KE0 ENNII
:::::
XP_016 ENNII
>>XP_006718944 (OMIM: 252010,256000,613622) PREDICTED: F (275 aa)
initn: 1900 init1: 1900 opt: 1900 Z-score: 2250.9 bits: 425.1 E(85289): 1.2e-118
Smith-Waterman score: 1900; 100.0% identity (100.0% similar) in 275 aa overlap (212-486:1-275)
190 200 210 220 230 240
pF1KE0 GAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQG
::::::::::::::::::::::::::::::
XP_006 MEDEGWFDPWCLLQGLRRKVQSLGVLFCQG
10 20 30
250 260 270 280 290 300
pF1KE0 EVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAAL
40 50 60 70 80 90
310 320 330 340 350 360
pF1KE0 AGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLG
100 110 120 130 140 150
370 380 390 400 410 420
pF1KE0 GRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGV
160 170 180 190 200 210
430 440 450 460 470 480
pF1KE0 VGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQ
220 230 240 250 260 270
pF1KE0 ENNII
:::::
XP_006 ENNII
486 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:45:18 2016 done: Fri Nov 4 08:45:19 2016
Total Scan time: 8.870 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]