FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0028, 747 aa
  1>>>pF1KE0028 747 - 747 aa - 747 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.3459+/-0.000946; mu= 7.1386+/- 0.057
 mean_var=167.0946+/-34.430, 0's: 0 Z-trim(111.1): 46  B-trim: 0 in 0/54
 Lambda= 0.099219
 statistics sampled from 12090 (12129) to 12090 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.373), width:  16
 Scan time:  4.310

The best scores are:                                      opt bits E(32554)
CCDS34758.1 WDR91 gene_id:29062|Hs108|chr7         ( 747) 5014 730.1 2.9e-210


>>CCDS34758.1 WDR91 gene_id:29062|Hs108|chr7              (747 aa)
 initn: 5014 init1: 5014 opt: 5014  Z-score: 3888.3  bits: 730.1 E(32554): 2.9e-210
Smith-Waterman score: 5014; 99.9% identity (100.0% similar) in 747 aa overlap (1-747:1-747)

               10        20        30        40        50        60
pF1KE0 MAEAVERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQLMQVYDLAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MAEAVERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQLMQVYDLAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 LRDYWSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTNRNDKAQEFFAKQATELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LRDYWSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTNRNDKAQEFFAKQATELQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 NQAEWKDWFVLPFLPSPDTNPTFATYFSRQWADTFIVSLHNFLSVLFQCMPVPVILNFDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 NQAEWKDWFVLPFLPSPDTNPTFATYFSRQWADTFIVSLHNFLSVLFQCMPVPVILNFDA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 ECQRTNQVQEENEVLRQKLFALQAEIHRLKKEEQQPEEEEALVQHKLPPYVSNMDRLGDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ECQRTNQVQEENEVLRQKLFALQAEIHRLKKEEQQPEEEEALVQHKLPPYVSNMDRLGDS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 ELAMVCSQRNASLSQSPRVGFLSSLLPQSKKSPSRLSPAQGPPQPQSSAKKESFGGQGTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ELAMVCSQRNASLSQSPRVGFLSSLLPQSKKSPSRLSPAQGPPQPQSSAKKESFGGQGTK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 GKDPTSGAKDGKSLLSGLATGESGWSQHRQRRLQDHGKERKELFSTTTSQCAEKKPEASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GKDPTSGAKDGKSLLSGLATGESGWSQHRQRRLQDHGKERKELFSTTTSQCAEKKPEASG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 PEAEPCPELHTEPVEPLTRASSAGPEGGGVRPEQPFIVLGQEEYGEHHSSIMHCRVDCSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PEAEPCPELHTEPVEPLTRASSAGPEGGGVRPEQPFIVLGQEEYGEHHSSIMHCRVDCSG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 RRVASLDVDGVIKVWSFNPIMQTKASSISKSPLLSLEWATKRDRLLLLGSGVGTVRLYDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RRVASLDVDGVIKVWSFNPIMQTKASSISKSPLLSLEWATKRDRLLLLGSGVGTVRLYDT
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 EAKKNLCEININDNMPRILSLACSPNGASFVCSAAAPSLTSQVDFSAPDIGSKGMNRVPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
CCDS34 EAKKNLCEININDNMPRILSLACSPNGASFVCSAAAPSLTSQVDFSAPDIGSKGMNQVPG
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 RLLLWDTKTMKQQLQFSLDPEPIAINCTAFNHNGNLLVTGAADGVIRLFDMQQHECAMSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RLLLWDTKTMKQQLQFSLDPEPIAINCTAFNHNGNLLVTGAADGVIRLFDMQQHECAMSW
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE0 RAHYGEVYSVEFSYDENTVYSIGEDGKFIQWNIHKSGLKVSEYSLPSDATGPFVLSGYSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RAHYGEVYSVEFSYDENTVYSIGEDGKFIQWNIHKSGLKVSEYSLPSDATGPFVLSGYSG
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE0 YKQVQVPRGRLFAFDSEGNYMLTCSATGGVIYKLGGDEKVLESCLSLGGHRAPVVTVDWS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 YKQVQVPRGRLFAFDSEGNYMLTCSATGGVIYKLGGDEKVLESCLSLGGHRAPVVTVDWS
              670       680       690       700       710       720

              730       740       
pF1KE0 TAMDCGTCLTASMDGKIKLTTLLAHKA
       :::::::::::::::::::::::::::
CCDS34 TAMDCGTCLTASMDGKIKLTTLLAHKA
              730       740       




747 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 07:47:01 2016 done: Fri Nov  4 07:47:02 2016
 Total Scan time:  4.310 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]