(Circular) (Six-base) MAPSORT of: pF1KE0093.seq Check: 4010 from: 1 to: 6398 pF1KE0093 6398 bp With 182 enzymes: SgfI * April 24, 2009 13:10 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 263 368 576 1453 263 Size: 105 208 877 5208 Fragments arranged by size: 5208 877 208 105 AccI GT'mk_AC Cuts at: 899 3052 3064 3436 899 Size: 2153 12 372 3861 Fragments arranged by size: 3861 2153 372 12 Acc65I G'GTAC_C Cuts at: 3323 3414 3323 Size: 91 6307 AclI AA'CG_TT Cuts at: 6238 6238 Size: 6398 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 373 1785 2208 4223 4655 5402 5670 373 Size: 1412 423 2015 432 747 268 1101 Fragments arranged by size: 2015 1412 1101 747 432 423 268 AfeI AGC'GCT Cuts at: 3331 3331 Size: 6398 AflIII A'CryG_T Cuts at: 1780 2796 3750 4854 5831 1780 Size: 1016 954 1104 977 2347 Fragments arranged by size: 2347 1104 1016 977 954 AgeI A'CCGG_T Cuts at: 4786 4786 Size: 6398 AhdI GACnn_n'nnGTC Cuts at: 2871 2871 Size: 6398 AleI CACnn'nnGTG Cuts at: 1004 1517 1004 Size: 513 5885 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1465 1535 1465 Size: 70 6328 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2494 2526 2494 Size: 32 6366 AlwNI CAG_nnn'CTG Cuts at: 536 924 1445 1542 2282 2531 2633 3703 5270 Size: 388 521 97 740 249 102 1070 1567 Cuts at: 5270 536 Size: 1664 Fragments arranged by size: 1664 1567 1070 740 521 388 249 102 97 ApaI G_GGCC'C Cuts at: 284 622 2087 2830 284 Size: 338 1465 743 3852 Fragments arranged by size: 3852 1465 743 338 ApaLI G'TGCA_C Cuts at: 250 2107 2949 5168 250 Size: 1857 842 2219 1480 Fragments arranged by size: 2219 1857 1480 842 ApoI r'AATT_y Cuts at: 2432 3402 5751 6007 2432 Size: 970 2349 256 2823 Fragments arranged by size: 2823 2349 970 256 AseI AT'TA_AT Cuts at: 20 20 Size: 6398 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 6398 AvaI C'yCGr_G Cuts at: 177 277 419 489 1854 2026 2234 2256 2823 Size: 100 142 70 1365 172 208 22 567 Cuts at: 2823 3089 3418 177 Size: 266 329 3157 Fragments arranged by size: 3157 1365 567 329 266 208 172 142 100 70 22 BamHI G'GATC_C Cuts at: 3423 3423 Size: 6398 BanI G'GyrC_C Cuts at: 118 455 541 998 1604 1660 1685 1756 1858 Size: 337 86 457 606 56 25 71 102 Cuts at: 1858 3122 3323 3414 3828 4076 4111 118 Size: 1264 201 91 414 248 35 2405 Fragments arranged by size: 2405 1264 606 457 414 337 248 201 102 91 86 71 56 35 25 BanII G_rGCy'C Cuts at: 284 622 1750 1797 1957 2087 2297 2660 2722 Size: 338 1128 47 160 130 210 363 62 Cuts at: 2722 2830 3412 4442 284 Size: 108 582 1030 2240 Fragments arranged by size: 2240 1128 1030 582 363 338 210 160 130 108 62 47 BbeI G_GCGC'C Cuts at: 122 459 545 1760 3126 3832 4080 122 Size: 337 86 1215 1366 706 248 2440 Fragments arranged by size: 2440 1366 1215 706 337 248 86 BbsI GAAGACnn'nnnn_ Cuts at: 1244 1244 Size: 6398 BbvCI CC'TCA_GC Cuts at: 683 683 Size: 6398 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 171 205 2559 2593 2781 2815 171 Size: 34 2354 34 188 34 3754 Fragments arranged by size: 3754 2354 188 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 4296 5057 6398 4296 Size: 761 1341 4296 Fragments arranged by size: 4296 1341 761 BclI T'GATC_A Cuts at: 644 3918 644 Size: 3274 3124 BglI GCCn_nnn'nGGC Cuts at: 288 512 560 1754 3001 288 Size: 224 48 1194 1247 3685 Fragments arranged by size: 3685 1247 1194 224 48 BglII A'GATC_T Cuts at: 2360 3913 5950 2360 Size: 1553 2037 2808 Fragments arranged by size: 2808 2037 1553 BlpI GC'TnA_GC Cuts at: 529 1951 3510 529 Size: 1422 1559 3417 Fragments arranged by size: 3417 1559 1422 Bme1580I G_kGCm'C Cuts at: 184 254 284 622 1001 2087 2111 2830 2953 Size: 70 30 338 379 1086 24 719 123 Cuts at: 2953 3142 4023 4116 5172 184 Size: 189 881 93 1056 1410 Fragments arranged by size: 1410 1086 1056 881 719 379 338 189 123 93 70 30 24 BmgBI CAC'GTC Cuts at: 210 249 740 2799 210 Size: 39 491 2059 3809 Fragments arranged by size: 3809 2059 491 39 BmrI ACTGGGnnnn_n' Cuts at: 3050 3610 3691 4026 6170 3050 Size: 560 81 335 2144 3278 Fragments arranged by size: 3278 2144 560 335 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2379 3033 4765 2379 Size: 654 1732 4012 Fragments arranged by size: 4012 1732 654 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1039 1764 1782 1859 1039 Size: 725 18 77 5578 Fragments arranged by size: 5578 725 77 18 Bpu10I CC'TnA_GC Cuts at: 683 698 683 Size: 15 6383 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 1411 2624 3574 4453 4945 5243 1411 Size: 1213 950 879 492 298 2566 Fragments arranged by size: 2566 1213 950 879 492 298 BsaI GGTCTCn'nnnn_ Cuts at: 687 805 1252 3254 6102 687 Size: 118 447 2002 2848 983 Fragments arranged by size: 2848 2002 983 447 118 BsaAI yAC'GTr Cuts at: 3056 3751 3056 Size: 695 5703 BsaBI GATnn'nnATC Cuts at: 6 3912 5949 6 Size: 3906 2037 455 Fragments arranged by size: 3906 2037 455 BsaHI Gr'CG_yC Cuts at: 119 297 456 542 830 1714 1757 2887 3123 Size: 178 159 86 288 884 43 1130 236 Cuts at: 3123 3829 4077 4779 6275 119 Size: 706 248 702 1496 242 Fragments arranged by size: 1496 1130 884 706 702 288 248 242 236 178 159 86 43 BsaWI w'CCGG_w Cuts at: 3587 4108 4786 5060 5207 5618 3587 Size: 521 678 274 147 411 4367 Fragments arranged by size: 4367 678 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 499 529 1343 1373 499 Size: 30 814 30 5524 Fragments arranged by size: 5524 814 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 451 1060 1070 3013 451 Size: 609 10 1943 3836 Fragments arranged by size: 3836 1943 609 10 BseYI C'CCAG_C Cuts at: 312 670 1278 1912 2531 3823 4581 5158 5654 Size: 358 608 634 619 1292 758 577 496 Cuts at: 5654 312 Size: 1056 Fragments arranged by size: 1292 1056 758 634 619 608 577 496 358 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 340 862 1227 1791 2377 2562 2569 2866 3118 Size: 522 365 564 586 185 7 297 252 Cuts at: 3118 340 Size: 3620 Fragments arranged by size: 3620 586 564 522 365 297 252 185 7 BsiEI CG_ry'CG Cuts at: 104 206 465 1947 2836 3940 3986 5194 104 Size: 102 259 1482 889 1104 46 1208 1308 Fragments arranged by size: 1482 1308 1208 1104 889 259 102 46 BsiHKAI G_wGCw'C Cuts at: 224 254 503 803 2111 2297 2908 2953 3061 Size: 30 249 300 1308 186 611 45 108 Cuts at: 3061 3412 4190 4380 5172 224 Size: 351 778 190 792 1450 Fragments arranged by size: 1450 1308 792 778 611 351 300 249 190 186 108 45 30 BsmI GAATG_Cn' Cuts at: 1560 1560 Size: 6398 BsmBI CGTCTCn'nnnn_ Cuts at: 528 2586 528 Size: 2058 4340 Bsp1286I G_dGCh'C Cuts at: 184 224 254 284 503 622 803 1001 1750 Size: 40 30 30 219 119 181 198 749 Cuts at: 1750 1797 1957 2087 2111 2297 2660 2722 2830 Size: 47 160 130 24 186 363 62 108 Cuts at: 2830 2908 2953 3061 3142 3412 4023 4116 4190 Size: 78 45 108 81 270 611 93 74 Cuts at: 4190 4380 4442 5172 184 Size: 190 62 730 1410 Fragments arranged by size: 1410 749 730 611 363 270 219 198 190 186 181 160 130 119 108 108 93 81 78 74 62 62 47 45 40 30 30 24 BspEI T'CCGG_A Cuts at: 5618 5618 Size: 6398 BspHI T'CATG_A Cuts at: 887 5574 887 Size: 4687 1711 BspMI ACCTGCnnnn'nnnn_ Cuts at: 263 368 413 576 1322 1453 1898 2209 2776 Size: 105 45 163 746 131 445 311 567 Cuts at: 2776 3076 3352 3448 3662 3964 4345 263 Size: 300 276 96 214 302 381 2316 Fragments arranged by size: 2316 746 567 445 381 311 302 300 276 214 163 131 105 96 45 BsrBI CCG'CTC Cuts at: 50 135 771 1011 4690 4744 6228 6393 50 Size: 85 636 240 3679 54 1484 165 55 Fragments arranged by size: 3679 1484 636 240 165 85 55 54 BsrDI GCAATG_nn' Cuts at: 4310 4310 Size: 6398 BsrFI r'CCGG_y Cuts at: 363 547 1946 2835 4396 4577 4786 363 Size: 184 1399 889 1561 181 209 1975 Fragments arranged by size: 1975 1561 1399 889 209 184 181 BsrGI T'GTAC_A Cuts at: 1152 2587 1152 Size: 1435 4963 BssHII G'CGCG_C Cuts at: 324 342 324 Size: 18 6380 BssSI C'ACGA_G Cuts at: 2583 2982 3257 4669 5027 2583 Size: 399 275 1412 358 3954 Fragments arranged by size: 3954 1412 399 358 275 BstAPI GCAn_nnn'nTGC Cuts at: 1500 1850 2201 3105 3137 3775 1500 Size: 350 351 904 32 638 4123 Fragments arranged by size: 4123 904 638 351 350 32 BstBI TT'CG_AA Cuts at: 4759 4759 Size: 6398 BstEII G'GTnAC_C Cuts at: 2763 2763 Size: 6398 BstXI CCAn_nnnn'nTGG Cuts at: 2428 2616 2428 Size: 188 6210 BstYI r'GATC_y Cuts at: 1 1538 2360 3423 3890 3913 4248 4494 5506 Size: 1537 822 1063 467 23 335 246 1012 Cuts at: 5506 5592 5604 5950 1 Size: 86 12 346 449 Fragments arranged by size: 1537 1063 1012 822 467 449 346 335 246 86 23 12 BstZ17I GTA'TAC Cuts at: 900 900 Size: 6398 BtgI C'CryG_G Cuts at: 226 459 849 1002 1750 1982 2713 2942 3126 Size: 233 390 153 748 232 731 229 184 Cuts at: 3126 226 Size: 3498 Fragments arranged by size: 3498 748 731 390 233 232 229 184 153 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 1251 4348 4529 4692 1251 Size: 3097 181 163 2957 Fragments arranged by size: 3097 2957 181 163 BtsI GCAGTG_nn' Cuts at: 1215 1537 1848 1936 2041 2465 2550 2557 2849 Size: 322 311 88 105 424 85 7 292 Cuts at: 2849 3106 3641 1215 Size: 257 535 3972 Fragments arranged by size: 3972 535 424 322 311 292 257 105 88 85 7 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 1303 1338 1303 Size: 35 6363 DraI TTT'AAA Cuts at: 3397 3397 Size: 6398 DraIII CAC_nnn'GTG Cuts at: 807 1667 2211 807 Size: 860 544 4994 Fragments arranged by size: 4994 860 544 DrdI GACnn_nn'nnGTC Cuts at: 4104 4962 4104 Size: 858 5540 EaeI y'GGCC_r Cuts at: 203 462 504 824 2051 2833 3983 4157 4548 Size: 259 42 320 1227 782 1150 174 391 Cuts at: 4548 4575 5920 203 Size: 27 1345 681 Fragments arranged by size: 1345 1227 1150 782 681 391 320 259 174 42 27 EagI C'GGCC_G Cuts at: 203 462 2833 3983 203 Size: 259 2371 1150 2618 Fragments arranged by size: 2618 2371 1150 259 EarI CTCTTCn'nnn_ Cuts at: 4421 4631 4421 Size: 210 6188 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 2573 4606 4916 5062 6208 2573 Size: 2033 310 146 1146 2763 Fragments arranged by size: 2763 2033 1146 310 146 EcoICRI GAG'CTC Cuts at: 2295 3410 2295 Size: 1115 5283 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 373 1039 1764 1782 1785 1859 2208 4223 4655 Size: 666 725 18 3 74 349 2015 432 Cuts at: 4655 5402 5670 373 Size: 747 268 1101 Fragments arranged by size: 2015 1101 747 725 666 432 349 268 74 18 3 EcoNI CCTnn'n_nnAGG Cuts at: 2029 3307 2029 Size: 1278 5120 EcoO109I rG'GnC_Cy Cuts at: 281 618 1334 2061 2084 2827 3078 3537 281 Size: 337 716 727 23 743 251 459 3142 Fragments arranged by size: 3142 743 727 716 459 337 251 23 EcoRI G'AATT_C Cuts at: 2432 3402 2432 Size: 970 5428 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 2238 4417 2238 Size: 2179 4219 FspI TGC'GCA Cuts at: 4179 4179 Size: 6398 HaeII r_GCGC'y Cuts at: 122 459 536 545 1760 3126 3333 3832 4080 Size: 337 77 9 1215 1366 207 499 248 Cuts at: 4080 5102 6081 122 Size: 1022 979 439 Fragments arranged by size: 1366 1215 1022 979 499 439 337 248 207 77 9 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1014 1046 1300 1303 1332 1335 2162 2194 2598 Size: 32 254 3 29 3 827 32 404 Cuts at: 2598 2630 2857 2889 4240 4270 4272 4302 1014 Size: 32 227 32 1351 30 2 30 3110 Fragments arranged by size: 3110 1351 827 404 254 227 32 32 32 32 30 30 29 3 3 2 HincII GTy'rAC Cuts at: 1992 2601 3065 3437 1992 Size: 609 464 372 4953 Fragments arranged by size: 4953 609 464 372 HindIII A'AGCT_T Cuts at: 955 955 Size: 6398 KasI G'GCGC_C Cuts at: 118 455 541 1756 3122 3828 4076 118 Size: 337 86 1215 1366 706 248 2440 Fragments arranged by size: 2440 1366 1215 706 337 248 86 KpnI G_GTAC'C Cuts at: 3327 3418 3327 Size: 91 6307 MluI A'CGCG_T Cuts at: 5831 5831 Size: 6398 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1161 5069 5253 1161 Size: 3908 184 2306 Fragments arranged by size: 3908 2306 184 MscI TGG'CCA Cuts at: 4159 4159 Size: 6398 MslI CAynn'nnrTG Cuts at: 892 946 1004 1160 1307 1517 4387 4514 892 Size: 54 58 156 147 210 2870 127 2776 Fragments arranged by size: 2870 2776 210 156 147 127 58 54 MspA1I CmG'CkG Cuts at: 187 264 393 461 2186 2391 2528 2781 2915 Size: 77 129 68 1725 205 137 253 134 Cuts at: 2915 3509 3823 4183 5196 5441 187 Size: 594 314 360 1013 245 1144 Fragments arranged by size: 1725 1144 1013 594 360 314 253 245 205 137 134 129 77 68 NaeI GCC'GGC Cuts at: 365 549 2837 4579 365 Size: 184 2288 1742 2184 Fragments arranged by size: 2288 2184 1742 184 NarI GG'CG_CC Cuts at: 119 456 542 1757 3123 3829 4077 119 Size: 337 86 1215 1366 706 248 2440 Fragments arranged by size: 2440 1366 1215 706 337 248 86 NcoI C'CATG_G Cuts at: 1002 1002 Size: 6398 NgoMIV G'CCGG_C Cuts at: 363 547 2835 4577 363 Size: 184 2288 1742 2184 Fragments arranged by size: 2288 2184 1742 184 NotI GC'GGCC_GC Cuts at: 462 462 Size: 6398 NspI r_CATG'y Cuts at: 1512 1732 1770 1784 1876 3108 3318 3451 3951 Size: 220 38 14 92 1232 210 133 500 Cuts at: 3951 4858 1512 Size: 907 3052 Fragments arranged by size: 3052 1232 907 500 220 210 133 92 38 14 PasI CC'CwG_GG Cuts at: 615 1831 615 Size: 1216 5182 PciI A'CATG_T Cuts at: 1780 4854 1780 Size: 3074 3324 PflMI CCAn_nnn'nTGG Cuts at: 628 924 1278 1290 628 Size: 296 354 12 5736 Fragments arranged by size: 5736 354 296 12 PfoI T'CCnGG_A Cuts at: 1721 1919 2063 1721 Size: 198 144 6056 Fragments arranged by size: 6056 198 144 PmeI GTTT'AAAC Cuts at: 3397 3397 Size: 6398 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 5537 5569 5537 Size: 32 6366 PpuMI rG'GwC_Cy Cuts at: 1334 2061 1334 Size: 727 5671 PshAI GACnn'nnGTC Cuts at: 1244 1244 Size: 6398 PspOMI G'GGCC_C Cuts at: 280 618 2083 2826 280 Size: 338 1465 743 3852 Fragments arranged by size: 3852 1465 743 338 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 883 915 883 Size: 32 6366 PstI C_TGCA'G Cuts at: 1402 1570 2157 2185 2786 3086 3349 3445 4130 Size: 168 587 28 601 300 263 96 685 Cuts at: 4130 1402 Size: 3670 Fragments arranged by size: 3670 685 601 587 300 263 168 96 28 PvuI CG_AT'CG Cuts at: 104 104 Size: 6398 PvuII CAG'CTG Cuts at: 187 393 2781 2915 3823 4183 187 Size: 206 2388 134 908 360 2402 Fragments arranged by size: 2402 2388 908 360 206 134 RsrII CG'GwC_CG Cuts at: 2939 4593 2939 Size: 1654 4744 SacI G_AGCT'C Cuts at: 2297 3412 2297 Size: 1115 5283 SacII CC_GC'GG Cuts at: 462 462 Size: 6398 SalI G'TCGA_C Cuts at: 3063 3435 3063 Size: 372 6026 SapI GCTCTTCn'nnn_ Cuts at: 4421 4631 4421 Size: 210 6188 SbfI CC_TGCA'GG Cuts at: 3349 3445 3349 Size: 96 6302 ScaI AGT'ACT Cuts at: 5915 5915 Size: 6398 SexAI A'CCwGG_T Cuts at: 1079 1079 Size: 6398 SfcI C'TryA_G Cuts at: 33 1398 1515 1566 2153 2181 2782 3082 3165 Size: 1365 117 51 587 28 601 300 83 Cuts at: 3165 3345 3441 4126 5119 5310 33 Size: 180 96 685 993 191 1121 Fragments arranged by size: 1365 1121 993 685 601 587 300 191 180 117 96 83 51 28 SfiI GGCCn_nnn'nGGCC Cuts at: 560 560 Size: 6398 SfoI GGC'GCC Cuts at: 120 457 543 1758 3124 3830 4078 120 Size: 337 86 1215 1366 706 248 2440 Fragments arranged by size: 2440 1366 1215 706 337 248 86 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 6398 SgrAI Cr'CCGG_yG Cuts at: 547 547 Size: 6398 SmaI CCC'GGG Cuts at: 179 279 1856 2236 2825 3091 3420 179 Size: 100 1577 380 589 266 329 3157 Fragments arranged by size: 3157 1577 589 380 329 266 100 SmlI C'TyrA_G Cuts at: 1426 2639 3553 4468 4960 5222 1426 Size: 1213 914 915 492 262 2602 Fragments arranged by size: 2602 1213 915 914 492 262 SpeI A'CTAG_T Cuts at: 67 67 Size: 6398 SphI G_CATG'C Cuts at: 1512 3108 3451 3951 1512 Size: 1596 343 500 3959 Fragments arranged by size: 3959 1596 500 343 SrfI GCCC'GGGC Cuts at: 2825 2825 Size: 6398 StuI AGG'CCT Cuts at: 750 1970 3004 750 Size: 1220 1034 4144 Fragments arranged by size: 4144 1220 1034 StyI C'CwwG_G Cuts at: 1002 1901 2369 3532 3886 1002 Size: 899 468 1163 354 3514 Fragments arranged by size: 3514 1163 899 468 354 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1347 2691 3981 4114 4573 4782 1347 Size: 1344 1290 133 459 209 2963 Fragments arranged by size: 2963 1344 1290 459 209 133 TatI w'GTAC_w Cuts at: 1152 2587 5913 1152 Size: 1435 3326 1637 Fragments arranged by size: 3326 1637 1435 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 499 531 1153 1185 1343 1362 1375 1394 1915 Size: 32 622 32 158 19 13 19 521 Cuts at: 1915 1947 3304 3336 5915 5947 499 Size: 32 1357 32 2579 32 950 Fragments arranged by size: 2579 1357 950 622 521 158 32 32 32 32 32 19 19 13 Tth111I GACn'n_nGTC Cuts at: 974 2059 4195 974 Size: 1085 2136 3177 Fragments arranged by size: 3177 2136 1085 XbaI T'CTAG_A Cuts at: 3429 3429 Size: 6398 XcmI CCAnnnn_n'nnnnTGG Cuts at: 1543 3893 1543 Size: 2350 4048 XmaI C'CCGG_G Cuts at: 177 277 1854 2234 2823 3089 3418 177 Size: 100 1577 380 589 266 329 3157 Fragments arranged by size: 3157 1577 589 380 329 266 100 XmnI GAAnn'nnTTC Cuts at: 2746 2746 Size: 6398 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AfeI AflIII AgeI AhdI AleI AlfI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BstZ17I BtgI BtgZI BtsI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HindIII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NotI NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PshAI PspOMI PsrI PstI PvuI PvuII RsrII SacI SacII SalI SapI SbfI ScaI SexAI SfcI SfiI SfoI SgfI SgrAI SmaI SmlI SpeI SphI SrfI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XmaI XmnI Enzymes that do not cut: AatII AflII AscI AvrII BaeI BfrBI BmtI BsiWI Bsu36I ClaI EcoRV FseI FspAI HpaI MfeI NdeI NheI NruI NsiI PacI PmlI PsiI PspXI SanDI SnaBI SspI SwaI XhoI ZraI