Result of FASTA (ccds) for
pF1KE0117
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0117, 213 aa
1>>>pF1KE0117 213 - 213 aa - 213 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4267+/-0.00111; mu= 12.6968+/- 0.067
mean_var=76.3448+/-15.410, 0's: 0 Z-trim(103.7): 213 B-trim: 210 in 1/47
Lambda= 0.146786
statistics sampled from 7313 (7557) to 7313 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.232), width: 16
Scan time: 1.890
The best scores are: opt bits E(32554)
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 1410 308.2 2.6e-84
CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 1144 251.8 2.3e-67
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 601 136.8 9.6e-33
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 599 136.4 1.3e-32
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 586 133.6 8.4e-32
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 584 133.2 1.1e-31
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 567 129.6 1.3e-30
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 550 126.0 1.7e-29
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 537 123.3 1.1e-28
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 529 121.6 3.5e-28
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 524 120.5 7.8e-28
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 521 119.9 1.2e-27
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 521 119.9 1.2e-27
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 517 119.0 2.1e-27
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 511 117.8 5.2e-27
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 510 117.6 7e-27
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 507 116.9 9.1e-27
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 498 115.0 3.2e-26
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 492 113.7 8.1e-26
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 488 112.9 1.5e-25
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 487 112.7 1.8e-25
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 485 112.3 2.4e-25
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 484 112.0 2.6e-25
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 484 112.1 2.8e-25
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 484 112.1 2.9e-25
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 481 111.4 4.3e-25
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 481 111.4 4.5e-25
CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX ( 237) 473 109.8 1.5e-24
CCDS56537.1 RAB2A gene_id:5862|Hs108|chr8 ( 188) 469 108.8 2.2e-24
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 470 109.1 2.2e-24
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 464 107.9 5.7e-24
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 ( 213) 461 107.2 8e-24
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 460 107.0 9.5e-24
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 457 106.3 1.4e-23
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 453 105.5 2.7e-23
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3 ( 208) 430 100.6 7.4e-22
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 426 99.7 1.1e-21
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 427 100.0 1.2e-21
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 425 99.6 1.7e-21
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 423 99.1 2e-21
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 422 98.9 2.4e-21
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 416 97.6 5.5e-21
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 415 97.4 6.7e-21
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 410 96.4 1.4e-20
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 410 96.4 1.6e-20
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 409 96.2 1.7e-20
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 408 96.0 1.9e-20
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 407 95.7 2.1e-20
CCDS6662.1 RASEF gene_id:158158|Hs108|chr9 ( 740) 411 97.0 3.3e-20
CCDS10153.1 RAB27A gene_id:5873|Hs108|chr15 ( 221) 403 94.9 4.1e-20
>>CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX (213 aa)
initn: 1410 init1: 1410 opt: 1410 Z-score: 1627.3 bits: 308.2 E(32554): 2.6e-84
Smith-Waterman score: 1410; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
130 140 150 160 170 180
190 200 210
pF1KE0 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
:::::::::::::::::::::::::::::::::
CCDS14 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
190 200 210
>>CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 (217 aa)
initn: 1156 init1: 963 opt: 1144 Z-score: 1322.7 bits: 251.8 E(32554): 2.3e-67
Smith-Waterman score: 1144; 77.0% identity (94.0% similar) in 217 aa overlap (1-213:1-217)
10 20 30 40 50
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRF----AQVSDPTVGVDFFSRLVEIEPGK
::.::.::::::::::::::::::..:::.::: . . ::::::::::::.::::::
CCDS83 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 RIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQI
:::::.::::::::::::::.::::::::.:.:::::::::..:..::::.:..:::..:
CCDS83 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 VFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVK
::.:::::::: .::::::.:::::.: :::::::::.:: :::..:: ::::::::.:
CCDS83 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK
130 140 150 160 170 180
180 190 200 210
pF1KE0 RGEITIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
.::: ::.::::::::::::.::::::.:: ...:.:
CCDS83 KGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
190 200 210
>>CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 (216 aa)
initn: 583 init1: 252 opt: 601 Z-score: 701.3 bits: 136.8 E(32554): 9.6e-33
Smith-Waterman score: 601; 47.8% identity (81.2% similar) in 186 aa overlap (7-192:5-188)
10 20 30 40 50 60
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
: :. :.:::. ::::::. .::. :: : : :.::.: .:.:.:. ::.:::
CCDS95 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNID-GKQIKL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
::::::::: ::::::.:::...:.::..::: :..:... :::... : . ..:..:
CCDS95 QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSS-NMVIML
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
.:.: ::...:.: :.:.: .: .:. ..::::. : :::.:: . ...::. ...: .
CCDS95 IGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLF
120 130 140 150 160 170
190 200 210
pF1KE0 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
... .:.: :
CCDS95 DVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
180 190 200 210
>>CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 (212 aa)
initn: 581 init1: 250 opt: 599 Z-score: 699.1 bits: 136.4 E(32554): 1.3e-32
Smith-Waterman score: 599; 47.8% identity (80.1% similar) in 186 aa overlap (7-192:5-188)
10 20 30 40 50 60
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
: :. :.:::. ::::::. .::. :: : : :.::.: .:.. :. ::.:::
CCDS61 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-GKQIKL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
::::::::: ::::::.:::...:.::..::: : .:... :::... : . ..:..:
CCDS61 QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNS-NMVIML
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
.:.: ::...:.: ..:.: .: .:. ..::::. : :::.:: . ...::: ...: .
CCDS61 IGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVF
120 130 140 150 160 170
190 200 210
pF1KE0 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
:.. .:.: :
CCDS61 DINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
180 190 200 210
>>CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 (207 aa)
initn: 429 init1: 255 opt: 586 Z-score: 684.4 bits: 133.6 E(32554): 8.4e-32
Smith-Waterman score: 586; 48.0% identity (80.8% similar) in 177 aa overlap (1-177:1-175)
10 20 30 40 50 60
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
: . : :.:..:::: :::.::. ::.: : . :.:.:: : .:.. ::.:::
CCDS10 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELD-GKKIKL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
::::::::::::.:: ::::...: .:..::::..::.:...:... . :.. .. ..
CCDS10 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASS-DVERMI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
.:.:::.. .:::.....:::: ::.:..::::... :::.:: :.:::. ..:
CCDS10 LGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMN
120 130 140 150 160 170
190 200 210
pF1KE0 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
CCDS10 DSNSAGAGGPVKITENRSKKTSFFRCSLL
180 190 200
>>CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 (207 aa)
initn: 565 init1: 259 opt: 584 Z-score: 682.1 bits: 133.2 E(32554): 1.1e-31
Smith-Waterman score: 584; 47.4% identity (78.6% similar) in 192 aa overlap (1-190:1-190)
10 20 30 40 50 60
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
: . : :.:..:::: :::.:.. ::.: : .. :.:.:: : .:.. ::::::
CCDS12 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD-GKRIKL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
::::::::::::.:: ::::...: .:..::::..::.:...:... . :.. .. ..
CCDS12 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEKMI
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIY-ELVKRGE
.:.:::.. .:::.....:::: ::.:..::::. ::::.:: :.::: .. :. :
CCDS12 LGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLE
120 130 140 150 160 170
180 190 200 210
pF1KE0 ITIQEGW-EGVKSGFVPNVVHSSEEVVKSERRCLC
. .: .:::
CCDS12 GNSPQGSNQGVKITPDQQKRSSFFRCVLL
180 190 200
>>CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 (203 aa)
initn: 546 init1: 246 opt: 567 Z-score: 662.8 bits: 129.6 E(32554): 1.3e-30
Smith-Waterman score: 567; 46.6% identity (81.5% similar) in 178 aa overlap (1-178:1-174)
10 20 30 40 50 60
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
: . . :.:..:::: :::.::: ::.: : .. :.:.:: : :.:: ::.:::
CCDS10 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE-GKKIKL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
:.:::::::::..:: ::::...: .:..:::...::.:...:.. : ... . .:
CCDS10 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA-GVERLL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
.:.:::....:.: ...:.::: .:....::::....::..::..:.::: :.: :
CCDS10 LGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSGGR
120 130 140 150 160 170
190 200 210
pF1KE0 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
CCDS10 RSGNGNKPPSTDLKTCDKKNTNKCSLG
180 190 200
>>CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 (215 aa)
initn: 530 init1: 220 opt: 550 Z-score: 643.0 bits: 126.0 E(32554): 1.7e-29
Smith-Waterman score: 550; 39.4% identity (73.6% similar) in 208 aa overlap (7-213:10-215)
10 20 30 40 50
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKR
: :. :.::: ::::::...::: .: :.::.: .:..:. :..
CCDS68 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVS-GQK
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 IKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIV
:::::::::::::::..::.:::...:.:...::: : ..... :: ... ..: ..
CCDS68 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 FVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKR
.:.:.: ::..::.:: .::...: :. ..:.::. . ::: :: . .. ::. ..
CCDS68 -ILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQD
120 130 140 150 160 170
180 190 200 210
pF1KE0 GEITIQEGWEGVK-SGFVPNVVHSSEEVVKSERRCLC
: . .. . ::. . .:. . . : ... : :
CCDS68 GSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
180 190 200 210
>>CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 (213 aa)
initn: 506 init1: 247 opt: 537 Z-score: 628.1 bits: 123.3 E(32554): 1.1e-28
Smith-Waterman score: 537; 43.2% identity (75.0% similar) in 192 aa overlap (1-192:1-190)
10 20 30 40 50 60
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
: . . :...:::.. .:::::...: :..: : :. :.::.: ::.:.. :: .::
CCDS33 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNV-GGKTVKL
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
:::::::::::::.::.:::...:.::..:::.:...... :: .... ..: .:: .:
CCDS33 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP-NIVVIL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
:.: ::: .:.:: :: ..: . ..:::: . :::.:: .: : . . ::.
CCDS33 CGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGEL
120 130 140 150 160 170
190 200 210
pF1KE0 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
.. :.. :
CCDS33 DPERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC
180 190 200 210
>>CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 (200 aa)
initn: 399 init1: 239 opt: 529 Z-score: 619.4 bits: 121.6 E(32554): 3.5e-28
Smith-Waterman score: 529; 46.6% identity (79.1% similar) in 163 aa overlap (9-171:10-170)
10 20 30 40 50
pF1KE0 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIK
:.:..:::: :::.:.. ::.. : . :.:.:: . ::.. ::.::
CCDS17 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ-GKKIK
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 LQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFV
::::::::::::..:: .:::...: .:..:::: .::.:. .::.. :.. .. .
CCDS17 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE-DVERM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 LVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGE
:.:.:::.: .: : . ..:..: .:....::::. ::.:::: :..::
CCDS17 LLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE
120 130 140 150 160 170
180 190 200 210
pF1KE0 ITIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
CCDS17 PNSENVDISSGGGVTGWKSKCC
180 190 200
213 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:19:44 2016 done: Fri Nov 4 02:19:45 2016
Total Scan time: 1.890 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]