Result of FASTA (omim) for
pF1KE0143
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0143, 310 aa
1>>>pF1KE0143 310 - 310 aa - 310 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8448+/-0.000334; mu= 13.5656+/- 0.021
mean_var=87.0041+/-17.345, 0's: 0 Z-trim(116.3): 36 B-trim: 162 in 1/55
Lambda= 0.137501
statistics sampled from 27321 (27357) to 27321 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.321), width: 16
Scan time: 8.360
The best scores are: opt bits E(85289)
NP_001293119 (OMIM: 250950,600529) methylglutacony ( 310) 2003 407.0 2.4e-113
XP_006717213 (OMIM: 250950,600529) PREDICTED: meth ( 320) 1414 290.2 3.7e-78
XP_016870339 (OMIM: 250950,600529) PREDICTED: meth ( 230) 1084 224.6 1.5e-58
XP_011517104 (OMIM: 250950,600529) PREDICTED: meth ( 230) 1084 224.6 1.5e-58
NP_001689 (OMIM: 250950,600529) methylglutaconyl-C ( 339) 1084 224.7 2e-58
XP_005252123 (OMIM: 250950,600529) PREDICTED: meth ( 349) 1084 224.8 2e-58
XP_011517106 (OMIM: 250950,600529) PREDICTED: meth ( 170) 924 192.8 4.1e-49
XP_005252129 (OMIM: 250950,600529) PREDICTED: meth ( 255) 919 191.9 1.1e-48
XP_016870338 (OMIM: 250950,600529) PREDICTED: meth ( 323) 919 192.0 1.4e-48
XP_016870340 (OMIM: 250950,600529) PREDICTED: meth ( 214) 815 171.3 1.6e-42
XP_005252124 (OMIM: 250950,600529) PREDICTED: meth ( 333) 815 171.4 2.3e-42
XP_005252126 (OMIM: 250950,600529) PREDICTED: meth ( 298) 707 149.9 5.8e-36
XP_011517105 (OMIM: 250950,600529) PREDICTED: meth ( 180) 600 128.6 9.5e-30
XP_011517102 (OMIM: 250950,600529) PREDICTED: meth ( 265) 600 128.7 1.3e-29
NP_004083 (OMIM: 602292,616277) enoyl-CoA hydratas ( 290) 365 82.1 1.5e-15
XP_016881937 (OMIM: 600696) PREDICTED: delta(3,5)- ( 248) 267 62.6 9.5e-10
XP_011534244 (OMIM: 612136) PREDICTED: ethylmalony ( 189) 264 61.9 1.2e-09
NP_000173 (OMIM: 600890,609015,609016) trifunction ( 763) 272 63.9 1.2e-09
NP_001389 (OMIM: 600696) delta(3,5)-Delta(2,4)-die ( 328) 267 62.7 1.2e-09
XP_016866545 (OMIM: 612136) PREDICTED: ethylmalony ( 226) 264 62.0 1.3e-09
NP_001099014 (OMIM: 612136) ethylmalonyl-CoA decar ( 226) 264 62.0 1.3e-09
XP_005267105 (OMIM: 612136) PREDICTED: ethylmalony ( 301) 264 62.0 1.7e-09
XP_005267104 (OMIM: 612136) PREDICTED: ethylmalony ( 301) 264 62.0 1.7e-09
NP_001002030 (OMIM: 612136) ethylmalonyl-CoA decar ( 301) 264 62.0 1.7e-09
NP_001132982 (OMIM: 612136) ethylmalonyl-CoA decar ( 307) 264 62.1 1.7e-09
NP_001957 (OMIM: 607037,615605) peroxisomal bifunc ( 723) 256 60.7 1e-08
XP_011510819 (OMIM: 607037,615605) PREDICTED: pero ( 627) 219 53.3 1.5e-06
NP_001159887 (OMIM: 607037,615605) peroxisomal bif ( 627) 219 53.3 1.5e-06
NP_932164 (OMIM: 250620,610690) 3-hydroxyisobutyry ( 338) 174 44.2 0.00043
NP_055177 (OMIM: 250620,610690) 3-hydroxyisobutyry ( 386) 174 44.3 0.00048
XP_011509255 (OMIM: 250620,610690) PREDICTED: 3-hy ( 386) 174 44.3 0.00048
NP_733841 (OMIM: 400016,415000) testis-specific ch ( 540) 155 40.6 0.0086
>>NP_001293119 (OMIM: 250950,600529) methylglutaconyl-Co (310 aa)
initn: 2003 init1: 2003 opt: 2003 Z-score: 2155.8 bits: 407.0 E(85289): 2.4e-113
Smith-Waterman score: 2003; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KE0 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DKKVRTIIIRSEVPGIFCAANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKKVRTIIIRSEVPGIFCAANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFK
250 260 270 280 290 300
310
pF1KE0 EKRPPRYKGE
::::::::::
NP_001 EKRPPRYKGE
310
>>XP_006717213 (OMIM: 250950,600529) PREDICTED: methylgl (320 aa)
initn: 1981 init1: 1395 opt: 1414 Z-score: 1524.1 bits: 290.2 E(85289): 3.7e-78
Smith-Waterman score: 1964; 96.6% identity (96.6% similar) in 320 aa overlap (1-310:1-320)
10 20 30 40 50 60
pF1KE0 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 PAPKRGYSSEMKTEDELRVRHLEEENRG----------IVVLGINRAYGKNSLSKNLIKM
::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_006 PAPKRGYSSEMKTEDELRVRHLEEENRDSSSMAADHYRIVVLGINRAYGKNSLSKNLIKM
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 LSKAVDALKSDKKVRTIIIRSEVPGIFCAANLPVPTIAAIDGLALGGGLELALACDIRVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LSKAVDALKSDKKVRTIIIRSEVPGIFCAANLPVPTIAAIDGLALGGGLELALACDIRVA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTK
250 260 270 280 290 300
300 310
pF1KE0 DRLEGLLAFKEKRPPRYKGE
::::::::::::::::::::
XP_006 DRLEGLLAFKEKRPPRYKGE
310 320
>>XP_016870339 (OMIM: 250950,600529) PREDICTED: methylgl (230 aa)
initn: 1256 init1: 1084 opt: 1084 Z-score: 1172.4 bits: 224.6 E(85289): 1.5e-58
Smith-Waterman score: 1202; 87.4% identity (87.4% similar) in 230 aa overlap (110-310:1-230)
80 90 100 110 120 130
pF1KE0 RHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCA
::::::::::::::::::::::::::::::
XP_016 MLSKAVDALKSDKKVRTIIIRSEVPGIFCA
10 20 30
140 150 160 170
pF1KE0 -----------------------------ANLPVPTIAAIDGLALGGGLELALACDIRVA
:::::::::::::::::::::::::::::::
XP_016 GADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
100 110 120 130 140 150
240 250 260 270 280 290
pF1KE0 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTK
160 170 180 190 200 210
300 310
pF1KE0 DRLEGLLAFKEKRPPRYKGE
::::::::::::::::::::
XP_016 DRLEGLLAFKEKRPPRYKGE
220 230
>>XP_011517104 (OMIM: 250950,600529) PREDICTED: methylgl (230 aa)
initn: 1256 init1: 1084 opt: 1084 Z-score: 1172.4 bits: 224.6 E(85289): 1.5e-58
Smith-Waterman score: 1202; 87.4% identity (87.4% similar) in 230 aa overlap (110-310:1-230)
80 90 100 110 120 130
pF1KE0 RHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCA
::::::::::::::::::::::::::::::
XP_011 MLSKAVDALKSDKKVRTIIIRSEVPGIFCA
10 20 30
140 150 160 170
pF1KE0 -----------------------------ANLPVPTIAAIDGLALGGGLELALACDIRVA
:::::::::::::::::::::::::::::::
XP_011 GADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
100 110 120 130 140 150
240 250 260 270 280 290
pF1KE0 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTK
160 170 180 190 200 210
300 310
pF1KE0 DRLEGLLAFKEKRPPRYKGE
::::::::::::::::::::
XP_011 DRLEGLLAFKEKRPPRYKGE
220 230
>>NP_001689 (OMIM: 250950,600529) methylglutaconyl-CoA h (339 aa)
initn: 1989 init1: 1084 opt: 1084 Z-score: 1170.0 bits: 224.7 E(85289): 2e-58
Smith-Waterman score: 1935; 91.4% identity (91.4% similar) in 339 aa overlap (1-310:1-339)
10 20 30 40 50 60
pF1KE0 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
70 80 90 100 110 120
130 140 150
pF1KE0 DKKVRTIIIRSEVPGIFCA-----------------------------ANLPVPTIAAID
::::::::::::::::::: ::::::::::::
NP_001 DKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAID
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE0 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE0 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVD
250 260 270 280 290 300
280 290 300 310
pF1KE0 LVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE
:::::::::::::::::::::::::::::::::::::::
NP_001 LVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE
310 320 330
>>XP_005252123 (OMIM: 250950,600529) PREDICTED: methylgl (349 aa)
initn: 1967 init1: 1084 opt: 1084 Z-score: 1169.8 bits: 224.8 E(85289): 2e-58
Smith-Waterman score: 1859; 88.3% identity (88.3% similar) in 342 aa overlap (8-310:8-349)
10 20 30 40 50 60
pF1KE0 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 PAPKRGYSSEMKTEDELRVRHLEEENRG----------IVVLGINRAYGKNSLSKNLIKM
::::::::::::::::::::::::::: ::::::::::::::::::::::
XP_005 PAPKRGYSSEMKTEDELRVRHLEEENRDSSSMAADHYRIVVLGINRAYGKNSLSKNLIKM
70 80 90 100 110 120
120 130 140
pF1KE0 LSKAVDALKSDKKVRTIIIRSEVPGIFCA-----------------------------AN
::::::::::::::::::::::::::::: ::
XP_005 LSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIAN
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE0 LPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGM
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE0 SLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAK
250 260 270 280 290 300
270 280 290 300 310
pF1KE0 LAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE
310 320 330 340
>>XP_011517106 (OMIM: 250950,600529) PREDICTED: methylgl (170 aa)
initn: 924 init1: 924 opt: 924 Z-score: 1002.7 bits: 192.8 E(85289): 4.1e-49
Smith-Waterman score: 924; 100.0% identity (100.0% similar) in 140 aa overlap (1-140:1-140)
10 20 30 40 50 60
pF1KE0 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DKKVRTIIIRSEVPGIFCAANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE
::::::::::::::::::::
XP_011 DKKVRTIIIRSEVPGIFCAAWRAGQGHHSPFIPVACSSASSRSLSRDQEE
130 140 150 160 170
>>XP_005252129 (OMIM: 250950,600529) PREDICTED: methylgl (255 aa)
initn: 1215 init1: 919 opt: 919 Z-score: 994.8 bits: 191.9 E(85289): 1.1e-48
Smith-Waterman score: 1161; 86.7% identity (86.7% similar) in 218 aa overlap (1-189:1-218)
10 20 30 40 50 60
pF1KE0 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
70 80 90 100 110 120
130 140 150
pF1KE0 DKKVRTIIIRSEVPGIFCA-----------------------------ANLPVPTIAAID
::::::::::::::::::: ::::::::::::
XP_005 DKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAID
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE0 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA
::::::::::::::::::::::::::::::::::::::
XP_005 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGVTSSTEVLNPSKSSMKIGIIIF
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE0 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVD
XP_005 QTPVNIDILASSHES
250
>>XP_016870338 (OMIM: 250950,600529) PREDICTED: methylgl (323 aa)
initn: 1720 init1: 919 opt: 919 Z-score: 993.4 bits: 192.0 E(85289): 1.4e-48
Smith-Waterman score: 1792; 86.7% identity (86.7% similar) in 339 aa overlap (1-310:1-323)
10 20 30 40 50 60
pF1KE0 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAAAVAAAPGALGSLHAGGARLVAACSAWLCPGLRLPGSLAGRRAGPAIWAQGWVPAAGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAPKRGYSSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKS
70 80 90 100 110 120
130 140 150
pF1KE0 DKKVRTIIIRSEVPGIFCA-----------------------------ANLPVPTIAAID
::::::::::::::::::: ::::::::::::
XP_016 DKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAID
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE0 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSA
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE0 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGME--
250 260 270 280 290
280 290 300 310
pF1KE0 LVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE
:::::::::::::::::::::::::
XP_016 --------------TIPTKDRLEGLLAFKEKRPPRYKGE
300 310 320
>>XP_016870340 (OMIM: 250950,600529) PREDICTED: methylgl (214 aa)
initn: 987 init1: 815 opt: 815 Z-score: 884.4 bits: 171.3 E(85289): 1.6e-42
Smith-Waterman score: 1059; 80.4% identity (80.4% similar) in 230 aa overlap (110-310:1-214)
80 90 100 110 120 130
pF1KE0 RHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCA
::::::::::::::::::::::::::::::
XP_016 MLSKAVDALKSDKKVRTIIIRSEVPGIFCA
10 20 30
140 150 160 170
pF1KE0 -----------------------------ANLPVPTIAAIDGLALGGGLELALACDIRVA
:::::::::::::::::::::::::::::::
XP_016 GADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE
100 110 120 130 140 150
240 250 260 270 280 290
pF1KE0 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTK
::::::::::::::::::::::::::::::::::::::: :::::
XP_016 QNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGME----------------TIPTK
160 170 180 190
300 310
pF1KE0 DRLEGLLAFKEKRPPRYKGE
::::::::::::::::::::
XP_016 DRLEGLLAFKEKRPPRYKGE
200 210
310 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:29:35 2016 done: Fri Nov 4 00:29:36 2016
Total Scan time: 8.360 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]