Result of FASTA (omim) for
pF1KE0147
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0147, 204 aa
1>>>pF1KE0147 204 - 204 aa - 204 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8381+/-0.000252; mu= 17.2314+/- 0.016
mean_var=71.7320+/-14.052, 0's: 0 Z-trim(121.4): 17 B-trim: 0 in 0/57
Lambda= 0.151432
statistics sampled from 37888 (37905) to 37888 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.801), E-opt: 0.2 (0.444), width: 16
Scan time: 6.490
The best scores are: opt bits E(85289)
XP_016883562 (OMIM: 610666) PREDICTED: neurensin-2 ( 204) 1434 321.2 7e-88
XP_006723693 (OMIM: 610666) PREDICTED: neurensin-2 ( 204) 1434 321.2 7e-88
XP_016883563 (OMIM: 610666) PREDICTED: neurensin-2 ( 204) 1434 321.2 7e-88
XP_016883564 (OMIM: 610666) PREDICTED: neurensin-2 ( 204) 1434 321.2 7e-88
NP_001310611 (OMIM: 610666) neurensin-2 isoform 1 ( 204) 1434 321.2 7e-88
XP_011527664 (OMIM: 610666) PREDICTED: neurensin-2 ( 204) 1434 321.2 7e-88
XP_011527665 (OMIM: 610666) PREDICTED: neurensin-2 ( 204) 1434 321.2 7e-88
NP_001310612 (OMIM: 610666) neurensin-2 isoform 1 ( 204) 1434 321.2 7e-88
NP_079234 (OMIM: 610666) neurensin-2 isoform 1 [Ho ( 204) 1434 321.2 7e-88
NP_001310610 (OMIM: 610666) neurensin-2 isoform 1 ( 204) 1434 321.2 7e-88
NP_001310609 (OMIM: 610666) neurensin-2 isoform 1 ( 204) 1434 321.2 7e-88
NP_001310614 (OMIM: 610666) neurensin-2 isoform 1 ( 204) 1434 321.2 7e-88
NP_001310613 (OMIM: 610666) neurensin-2 isoform 1 ( 204) 1434 321.2 7e-88
XP_011527662 (OMIM: 610666) PREDICTED: neurensin-2 ( 204) 1434 321.2 7e-88
NP_001310608 (OMIM: 610666) neurensin-2 isoform 2 ( 160) 697 160.1 1.7e-39
XP_016883565 (OMIM: 610666) PREDICTED: neurensin-2 ( 157) 500 117.1 1.5e-26
NP_542454 (OMIM: 616630) neurensin-1 [Homo sapiens ( 195) 354 85.3 7.2e-17
>>XP_016883562 (OMIM: 610666) PREDICTED: neurensin-2 iso (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
XP_016 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
XP_016 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>XP_006723693 (OMIM: 610666) PREDICTED: neurensin-2 iso (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
XP_006 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
XP_006 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>XP_016883563 (OMIM: 610666) PREDICTED: neurensin-2 iso (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
XP_016 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
XP_016 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>XP_016883564 (OMIM: 610666) PREDICTED: neurensin-2 iso (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
XP_016 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
XP_016 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>NP_001310611 (OMIM: 610666) neurensin-2 isoform 1 [Hom (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_001 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
NP_001 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>XP_011527664 (OMIM: 610666) PREDICTED: neurensin-2 iso (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
XP_011 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
XP_011 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>XP_011527665 (OMIM: 610666) PREDICTED: neurensin-2 iso (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
XP_011 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
XP_011 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>NP_001310612 (OMIM: 610666) neurensin-2 isoform 1 [Hom (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_001 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
NP_001 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>NP_079234 (OMIM: 610666) neurensin-2 isoform 1 [Homo s (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_079 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_079 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
NP_079 SWFSPPASPFGQSSVQTIQPKRDS
190 200
>>NP_001310610 (OMIM: 610666) neurensin-2 isoform 1 [Hom (204 aa)
initn: 1434 init1: 1434 opt: 1434 Z-score: 1698.7 bits: 321.2 E(85289): 7e-88
Smith-Waterman score: 1434; 99.5% identity (100.0% similar) in 204 aa overlap (1-204:1-204)
10 20 30 40 50 60
pF1KE0 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMPSCNRSCSCSRGPSVEDGKWYGVRSYLHLFYEDCAGTALSDDPEGPPVLCPRRPWPSL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRTADYNQALGTCRLAGT
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
NP_001 CWKISLSSGTLLLLLGVAALTTGYAVPPKLEGIGEGEFLVLDQRAADYNQALGTCRLAGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALCVAAGVLLAICLFWAMIGWLSQDTKAEPLDPEADSHVEVFGDEPEQQLSPIFRNASGQ
130 140 150 160 170 180
190 200
pF1KE0 SWFSPPASPFGQSSVQTIQPKRDS
::::::::::::::::::::::::
NP_001 SWFSPPASPFGQSSVQTIQPKRDS
190 200
204 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:23:32 2016 done: Fri Nov 4 00:23:33 2016
Total Scan time: 6.490 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]