FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0174, 306 aa
  1>>>pF1KE0174 306 - 306 aa - 306 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0913+/-0.000829; mu= 16.7599+/- 0.050
 mean_var=64.4810+/-13.279, 0's: 0 Z-trim(106.9): 40  B-trim: 322 in 1/49
 Lambda= 0.159720
 statistics sampled from 9237 (9267) to 9237 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.673), E-opt: 0.2 (0.285), width:  16
 Scan time:  2.550

The best scores are:                                      opt bits E(32554)
CCDS2963.1 ABHD10 gene_id:55347|Hs108|chr3         ( 306) 2068 485.1 2.8e-137
CCDS63718.1 ABHD10 gene_id:55347|Hs108|chr3        ( 205) 1300 308.0 3.8e-84


>>CCDS2963.1 ABHD10 gene_id:55347|Hs108|chr3              (306 aa)
 initn: 2068 init1: 2068 opt: 2068  Z-score: 2578.0  bits: 485.1 E(32554): 2.8e-137
Smith-Waterman score: 2068; 100.0% identity (100.0% similar) in 306 aa overlap (1-306:1-306)

               10        20        30        40        50        60
pF1KE0 MAVARLAAVAAWVPCRSWGWAAVPFGPHRGLSVLLARIPQRAPRWLPACRQKTSLSFLNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MAVARLAAVAAWVPCRSWGWAAVPFGPHRGLSVLLARIPQRAPRWLPACRQKTSLSFLNR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 PDLPNLAYKKLKGKSPGIIFIPGYLSYMNGTKALAIEEFCKSLGHACIRFDYSGVGSSDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 PDLPNLAYKKLKGKSPGIIFIPGYLSYMNGTKALAIEEFCKSLGHACIRFDYSGVGSSDG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 NSEESTLGKWRKDVLSIIDDLADGPQILVGSSLGGWLMLHAAIARPEKVVALIGVATAAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 NSEESTLGKWRKDVLSIIDDLADGPQILVGSSLGGWLMLHAAIARPEKVVALIGVATAAD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 TLVTKFNQLPVELKKEVEMKGVWSMPSKYSEEGVYNVQYSFIKEAEHHCLLHSPIPVNCP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 TLVTKFNQLPVELKKEVEMKGVWSMPSKYSEEGVYNVQYSFIKEAEHHCLLHSPIPVNCP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 IRLLHGMKDDIVPWHTSMQVADRVLSTDVDVILRKHSDHRMREKADIQLLVYTIDDLIDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 IRLLHGMKDDIVPWHTSMQVADRVLSTDVDVILRKHSDHRMREKADIQLLVYTIDDLIDK
              250       260       270       280       290       300

             
pF1KE0 LSTIVN
       ::::::
CCDS29 LSTIVN
             

>>CCDS63718.1 ABHD10 gene_id:55347|Hs108|chr3             (205 aa)
 initn: 1300 init1: 1300 opt: 1300  Z-score: 1624.1  bits: 308.0 E(32554): 3.8e-84
Smith-Waterman score: 1300; 100.0% identity (100.0% similar) in 192 aa overlap (1-192:1-192)

               10        20        30        40        50        60
pF1KE0 MAVARLAAVAAWVPCRSWGWAAVPFGPHRGLSVLLARIPQRAPRWLPACRQKTSLSFLNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MAVARLAAVAAWVPCRSWGWAAVPFGPHRGLSVLLARIPQRAPRWLPACRQKTSLSFLNR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 PDLPNLAYKKLKGKSPGIIFIPGYLSYMNGTKALAIEEFCKSLGHACIRFDYSGVGSSDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 PDLPNLAYKKLKGKSPGIIFIPGYLSYMNGTKALAIEEFCKSLGHACIRFDYSGVGSSDG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 NSEESTLGKWRKDVLSIIDDLADGPQILVGSSLGGWLMLHAAIARPEKVVALIGVATAAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 NSEESTLGKWRKDVLSIIDDLADGPQILVGSSLGGWLMLHAAIARPEKVVALIGVATAAD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 TLVTKFNQLPVELKKEVEMKGVWSMPSKYSEEGVYNVQYSFIKEAEHHCLLHSPIPVNCP
       ::::::::::::                                                
CCDS63 TLVTKFNQLPVEDSGRKNYISLHSA                                   
              190       200                                        




306 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 22:46:16 2016 done: Thu Nov  3 22:46:16 2016
 Total Scan time:  2.550 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]