Result of FASTA (ccds) for
pF1KE0183
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0183, 322 aa
1>>>pF1KE0183 322 - 322 aa - 322 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2106+/-0.000873; mu= 16.0329+/- 0.052
mean_var=59.0014+/-11.819, 0's: 0 Z-trim(104.9): 17 B-trim: 2 in 1/51
Lambda= 0.166972
statistics sampled from 8102 (8114) to 8102 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.63), E-opt: 0.2 (0.249), width: 16
Scan time: 2.270
The best scores are: opt bits E(32554)
CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 ( 322) 2137 523.2 1.1e-148
CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 ( 325) 1729 424.9 4.2e-119
CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 ( 322) 1192 295.5 3.7e-80
CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 ( 340) 783 197.0 1.8e-50
CCDS82469.1 SFXN5 gene_id:94097|Hs108|chr2 ( 253) 501 129.0 3.8e-30
CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 ( 337) 312 83.6 2.5e-16
>>CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 (322 aa)
initn: 2137 init1: 2137 opt: 2137 Z-score: 2782.9 bits: 523.2 E(32554): 1.1e-148
Smith-Waterman score: 2137; 100.0% identity (100.0% similar) in 322 aa overlap (1-322:1-322)
10 20 30 40 50 60
pF1KE0 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 PGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 QWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 MAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEA
250 260 270 280 290 300
310 320
pF1KE0 ELQAKIQESHPELRRVYFNKGL
::::::::::::::::::::::
CCDS43 ELQAKIQESHPELRRVYFNKGL
310 320
>>CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 (325 aa)
initn: 1729 init1: 1729 opt: 1729 Z-score: 2251.7 bits: 424.9 E(32554): 4.2e-119
Smith-Waterman score: 1729; 76.6% identity (94.1% similar) in 320 aa overlap (3-322:6-325)
10 20 30 40 50
pF1KE0 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQG
:::: .:::.:::::::::.::: ::::::::::.::.. :::..:.::..:: :
CCDS75 MESKMGELPLDINIQEPRWDQSTFLGRARHFFTVTDPRNLLLSGAQLEASRNIVQNYRAG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 IVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAV
.: ::.::..::::::.::::::::::::..:::::::::::::::::::.:::: ::.:
CCDS75 VVTPGITEDQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTITGCMLTFYRKTPTV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 LFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIG
.::::.::::::.:::.:::::.:.:: .:::::::::::::::::::..::::. ::.:
CCDS75 VFWQWVNQSFNAIVNYSNRSGDTPITVRQLGTAYVSATTGAVATALGLKSLTKHLPPLVG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 RFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMA
::::::::::::::::::::::::.:::::.:: :.::: :..::::.: :::.::: ::
CCDS75 RFVPFAAVAAANCINIPLMRQRELQVGIPVADEAGQRLGYSVTAAKQGIFQVVISRICMA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 APGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTS
:.:::::.::.::::: :::: ::..::.:::::::::::::::::::::::::. ...
CCDS75 IPAMAIPPLIMDTLEKKDFLKRRPWLGAPLQVGLVGFCLVFATPLCCALFPQKSSIHISN
250 260 270 280 290 300
300 310 320
pF1KE0 LEAELQAKIQESHPELRRVYFNKGL
:: ::.:.:.:..: .. ::.::::
CCDS75 LEPELRAQIHEQNPSVEVVYYNKGL
310 320
>>CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 (322 aa)
initn: 1191 init1: 1158 opt: 1192 Z-score: 1552.6 bits: 295.5 E(32554): 3.7e-80
Smith-Waterman score: 1192; 56.1% identity (79.3% similar) in 314 aa overlap (10-322:9-322)
10 20 30 40 50 60
pF1KE0 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESARKIVHDYRQGIVP
:: ::::: ::.::..::...::::........:. :. .:. :.:.::
CCDS75 MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSERELDWAKVMVEKSRMGVVP
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 PGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMMTFYRTTPAVLFW
:: ..: :: .::::::::::::: .::::: :.: .: ::: :. :::: :::.::
CCDS75 PGTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMIITGFMLQFYRTMPAVIFW
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 QWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNALTKHVSPLIGRFV
::.::::::.::::::.. .: .: ... .: .::: :::::.:.: :::.. ::.::.:
CCDS75 QWVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAVGMNMLTKKAPPLVGRWV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 PFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQVVVSRILMAAPG
::::::::::.:::.:::.:: :: : :.: :..:.: :: .:::::.::: :.:::
CCDS75 PFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGHSRRAAAIGITQVVISRITMSAPG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 MAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCLVFATPLCCALFPQKSSMSVTSLEA
: . : ::. ::: :... . ::.:: : : :.: .:. :.::::: . :. ::
CCDS75 MILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLIFMVPVACGLFPQKCELPVSYLEP
240 250 260 270 280 290
310 320
pF1KE0 ELQAKIQESHPELR-RVYFNKGL
.:: :. .. ::. :::::::
CCDS75 KLQDTIKAKYGELEPYVYFNKGL
300 310 320
>>CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 (340 aa)
initn: 818 init1: 439 opt: 783 Z-score: 1019.8 bits: 197.0 E(32554): 1.8e-50
Smith-Waterman score: 785; 39.1% identity (71.5% similar) in 330 aa overlap (2-322:19-340)
10 20 30 40
pF1KE0 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQ
:.. :: ... .::..:..: :: ::. . :::....:...
CCDS19 MADTATTASAAAASAASASSDAPP-FQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERR
10 20 30 40 50
50 60 70 80 90 100
pF1KE0 LESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTI
:. : ....::..: . ::.:...:: :. : .. .::::.::... :::. .:.. :
CCDS19 LREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPI
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 TGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATAL
. .. .: ...::::.::: :: :::.::.. : .... .:..:. .::. :.
CCDS19 VVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAV
120 130 140 150 160 170
170 180 190 200 210
pF1KE0 GLNALTKHV---SP----LIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLG
:::.:.... .: :: ::::: :::.:: :. ::: ::. :: : : .:: .:
CCDS19 GLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVG
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 ESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQ--VGLVGF
: ::..:. .....:... : ...::..:. ::: :.:. : . :.: : :..:
CCDS19 SSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAF
240 250 260 270 280 290
280 290 300 310 320
pF1KE0 CLVFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL
: : :: .:::: : . ...:: :. :. : : : .::::
CCDS19 GL--ALPLAISLFPQMSEIETSQLEPEI-AQATSS----RTVVYNKGL
300 310 320 330 340
>>CCDS82469.1 SFXN5 gene_id:94097|Hs108|chr2 (253 aa)
initn: 532 init1: 439 opt: 501 Z-score: 654.7 bits: 129.0 E(32554): 3.8e-30
Smith-Waterman score: 501; 37.5% identity (74.5% similar) in 200 aa overlap (2-194:19-217)
10 20 30 40
pF1KE0 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQ
:.. :: ... .::..:..: :: ::. . :::....:...
CCDS82 MADTATTASAAAASAASASSDAPP-FQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERR
10 20 30 40 50
50 60 70 80 90 100
pF1KE0 LESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTI
:. : ....::..: . ::.:...:: :. : .. .::::.::... :::. .:.. :
CCDS82 LREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPI
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 TGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATAL
. .. .: ...::::.::: :: :::.::.. : .... .:..:. .::. :.
CCDS82 VVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAV
120 130 140 150 160 170
170 180 190 200 210
pF1KE0 GLNALTKHV---SP----LIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLG
:::.:.... .: :: ::::: ::. .: . :
CCDS82 GLNVLVQKANKFTPATRLLIQRFVPFPAVGRLSCRHAPGCSSLCKASCAWQPSAWPCRWP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 ESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGLVGFCL
CCDS82 SASSRKCQRLKHPN
240 250
>>CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 (337 aa)
initn: 237 init1: 160 opt: 312 Z-score: 406.7 bits: 83.6 E(32554): 2.5e-16
Smith-Waterman score: 312; 22.0% identity (58.4% similar) in 327 aa overlap (5-322:25-337)
10 20 30
pF1KE0 MSGELPPNINIKEPRW--DQSTFIGRANHFFTVTDPRNIL
. ::. . : ....:: : .. . :: :..
CCDS76 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRF----WITERQSFIRRFLQWTELLDPTNVF
10 20 30 40 50
40 50 60 70 80 90
pF1KE0 LTNEQLESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVP
.. :..:..:... . . :. ..... .: .. :::... . . : .: .:
CCDS76 ISVESIENSRQLLCT-NEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLP
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE0 MNMTITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGA
. . :: . .:.. : . .. :. : : :. : . : . . : ::
CCDS76 FMAPTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSIN--GNRSYTCKPLERSLLMA--GA
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE0 VATALGLNALTKHVS-------PLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDEN
::.. :... . :. : : :..: .. :. .:. . :. : :: : :..
CCDS76 VASSTFLGVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKE
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 GNRLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGL
:: ::.: :. .:. ....:::.. . . :: . ... .... : ....
CCDS76 GNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWILKLSC
240 250 260 270 280 290
280 290 300 310 320
pF1KE0 VGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL
. . . . .:. ..::: .... ::: ..:. .:.. .....:.
CCDS76 TVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETE-----IFYHRGV
300 310 320 330
322 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:20:15 2016 done: Thu Nov 3 22:20:15 2016
Total Scan time: 2.270 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]