Result of FASTA (omim) for
pF1KE0257
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0257, 399 aa
1>>>pF1KE0257 399 - 399 aa - 399 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8288+/-0.000448; mu= 19.5537+/- 0.028
mean_var=94.3325+/-24.531, 0's: 0 Z-trim(110.6): 717 B-trim: 1823 in 2/46
Lambda= 0.132052
statistics sampled from 18191 (19045) to 18191 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.58), E-opt: 0.2 (0.223), width: 16
Scan time: 8.340
The best scores are: opt bits E(85289)
NP_001718 (OMIM: 300107) bombesin receptor subtype ( 399) 2602 506.7 3.9e-143
NP_005305 (OMIM: 305670) gastrin-releasing peptide ( 384) 1292 257.2 5e-68
NP_002502 (OMIM: 162341) neuromedin-B receptor iso ( 390) 1195 238.7 1.9e-62
XP_011534148 (OMIM: 162341) PREDICTED: neuromedin- ( 283) 764 156.4 7.9e-38
XP_016866390 (OMIM: 162341) PREDICTED: neuromedin- ( 301) 757 155.1 2.1e-37
XP_016866391 (OMIM: 162341) PREDICTED: neuromedin- ( 242) 722 148.3 1.8e-35
NP_001311236 (OMIM: 162341) neuromedin-B receptor ( 242) 722 148.3 1.8e-35
NP_001311237 (OMIM: 162341) neuromedin-B receptor ( 242) 722 148.3 1.8e-35
NP_000106 (OMIM: 131244,277580,600155,600501) endo ( 442) 590 123.5 1e-27
NP_001116131 (OMIM: 131244,277580,600155,600501) e ( 442) 590 123.5 1e-27
NP_001188326 (OMIM: 131244,277580,600155,600501) e ( 532) 590 123.6 1.1e-27
NP_003982 (OMIM: 131244,277580,600155,600501) endo ( 436) 577 121.0 5.5e-27
NP_001948 (OMIM: 131243,157300,616367) endothelin- ( 427) 539 113.8 8.3e-25
XP_005263090 (OMIM: 162642) PREDICTED: neuropeptid ( 381) 525 111.0 4.9e-24
NP_000901 (OMIM: 162642) neuropeptide Y receptor t ( 381) 525 111.0 4.9e-24
XP_005263091 (OMIM: 162642) PREDICTED: neuropeptid ( 381) 525 111.0 4.9e-24
NP_937822 (OMIM: 606925) pyroglutamylated RFamide ( 431) 491 104.6 4.7e-22
XP_011538239 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 490 104.4 4.9e-22
XP_011538238 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 490 104.4 4.9e-22
XP_016871876 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 490 104.4 4.9e-22
NP_001265723 (OMIM: 601790) neuropeptide Y recepto ( 375) 490 104.4 4.9e-22
NP_005963 (OMIM: 601790) neuropeptide Y receptor t ( 375) 490 104.4 4.9e-22
XP_016871875 (OMIM: 601790) PREDICTED: neuropeptid ( 375) 490 104.4 4.9e-22
NP_057624 (OMIM: 605569) probable G-protein couple ( 423) 490 104.4 5.3e-22
NP_444264 (OMIM: 607449) neuropeptide FF receptor ( 420) 486 103.7 8.9e-22
NP_001138228 (OMIM: 607449) neuropeptide FF recept ( 423) 486 103.7 9e-22
NP_004876 (OMIM: 607449) neuropeptide FF receptor ( 522) 486 103.8 1e-21
NP_071429 (OMIM: 607448) neuropeptide FF receptor ( 430) 468 100.2 9.8e-21
NP_000900 (OMIM: 162641) neuropeptide Y receptor t ( 384) 460 98.7 2.6e-20
XP_011530312 (OMIM: 162641) PREDICTED: neuropeptid ( 384) 460 98.7 2.6e-20
XP_005263088 (OMIM: 162641) PREDICTED: neuropeptid ( 384) 460 98.7 2.6e-20
NP_064552 (OMIM: 605108) neuromedin-U receptor 2 [ ( 415) 454 97.6 6.1e-20
NP_004239 (OMIM: 600895) prolactin-releasing pepti ( 370) 446 96.0 1.6e-19
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 444 95.6 2.1e-19
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 444 95.6 2.3e-19
NP_056542 (OMIM: 162323) substance-P receptor isof ( 311) 434 93.6 7.1e-19
NP_001048 (OMIM: 162321) substance-K receptor [Hom ( 398) 434 93.7 8.3e-19
NP_001049 (OMIM: 162323) substance-P receptor isof ( 407) 434 93.7 8.4e-19
XP_011527461 (OMIM: 244200,607123) PREDICTED: prok ( 348) 417 90.4 7.2e-18
XP_016883135 (OMIM: 244200,607123) PREDICTED: prok ( 384) 417 90.5 7.7e-18
NP_658986 (OMIM: 244200,607123) prokineticin recep ( 384) 417 90.5 7.7e-18
NP_115940 (OMIM: 176400,604161,614837) kiSS-1 rece ( 398) 414 89.9 1.2e-17
NP_005152 (OMIM: 600052) apelin receptor [Homo sap ( 380) 413 89.7 1.3e-17
XP_011535972 (OMIM: 605108) PREDICTED: neuromedin- ( 321) 403 87.7 4.3e-17
NP_620414 (OMIM: 607122) prokineticin receptor 1 [ ( 393) 390 85.3 2.7e-16
NP_005293 (OMIM: 602583) prosaposin receptor GPR37 ( 613) 388 85.2 4.7e-16
NP_001269833 (OMIM: 165196) kappa-type opioid rece ( 291) 381 83.5 7.4e-16
NP_000721 (OMIM: 118444) cholecystokinin receptor ( 428) 379 83.3 1.2e-15
XP_016881180 (OMIM: 600377) PREDICTED: galanin rec ( 269) 368 80.9 3.9e-15
NP_001471 (OMIM: 600377) galanin receptor type 1 [ ( 349) 363 80.1 9e-15
>>NP_001718 (OMIM: 300107) bombesin receptor subtype-3 [ (399 aa)
initn: 2602 init1: 2602 opt: 2602 Z-score: 2690.8 bits: 506.7 E(85289): 3.9e-143
Smith-Waterman score: 2602; 100.0% identity (100.0% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KE0 MAQRQPHSPNQTLISITNDTESSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQRQPHSPNQTLISITNDTESSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 KVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PEAIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEAIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 ARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 YVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADT
310 320 330 340 350 360
370 380 390
pF1KE0 SLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
:::::::::::::::::::::::::::::::::::::::
NP_001 SLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
370 380 390
>>NP_005305 (OMIM: 305670) gastrin-releasing peptide rec (384 aa)
initn: 1263 init1: 1047 opt: 1292 Z-score: 1342.2 bits: 257.2 E(85289): 5e-68
Smith-Waterman score: 1292; 58.6% identity (84.4% similar) in 326 aa overlap (24-349:22-341)
10 20 30 40 50 60
pF1KE0 MAQRQPHSPNQTLISITNDTESSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISV
:: .. .: :: ::: : .: .:.::: .
NP_005 MALNDCFLLNLEVDHFMHCNISSHSADLPVNDDWS---HPGI--LYVIPAVYGVIILI
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGC
:..:: :::.: .:::..:::.::.:::.::::::.::.::::..:::. ::::::::
NP_005 GLIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLITCAPVDASRYLADRWLFGRIGC
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 KVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFAL
:.. ::.:::::::::::: ::::::::.:.:.. : :.:..: :.::. .::.::..:.
NP_005 KLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKICLKAAFIWIISMLLAI
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 PEAIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLI
:::.::... :.. . :.:: ::. :: :..: .:::. :::::.:::::::::: .:
NP_005 PEAVFSDLHPFHEESTNQTFISCAPYPHSNELHPKIHSMASFLVFYVIPLSIISVYYYFI
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 ARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQT
:..: .:. :.:.: . :..::::::::.:.::::.:.:::.::::::..:::.:. .
NP_005 AKNLIQSAYNLPVEGNIHVKKQIESRKRLAKTVLVFVGLFAFCWLPNHVIYLYRSY-HYS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE0 YVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADT
:: : .::. .: .:.:::.:::::::::: :::::.:.:..::.::.
NP_005 EVDTSMLHFVTSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPGLIIRSHSTG
300 310 320 330 340 350
370 380 390
pF1KE0 SLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
NP_005 RSTTCMTSLKSTNPSVATFSLINGNICHERYV
360 370 380
>>NP_002502 (OMIM: 162341) neuromedin-B receptor isoform (390 aa)
initn: 1154 init1: 589 opt: 1195 Z-score: 1242.3 bits: 238.7 E(85289): 1.9e-62
Smith-Waterman score: 1195; 47.8% identity (75.9% similar) in 395 aa overlap (9-394:2-386)
10 20 30 40 50
pF1KE0 MAQRQPHSPNQTL--ISITNDTESSSSVVSNDNTNKGWSGDNSPGIEAL-------CAIY
:...: .:.:. .. :.:: .:: : :. .. :.:
NP_002 MPSKSLSNLSVTTGANESGSV------PEGWERDFLPASDGTTTELVIRCVIP
10 20 30 40
60 70 80 90 100 110
pF1KE0 ITYAVIISVGILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAE
: .::.::.::: .:.:.:. ...:..::::::..:: ::::::::::::::..:. .
NP_002 SLYLLIITVGLLGNIMLVKIFITNSAMRSVPNIFISNLAAGDLLLLLTCVPVDASRYFFD
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE0 GWLFGRIGCKVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCV
:.::..:::.. :.:::::::::::: ::::::.:.:.:.. : :.:.:.::::: .
NP_002 EWMFGKVGCKLIPVIQLTSVGVSVFTLTALSADRYRAIVNPMDMQTSGALLRTCVKAMGI
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 WIVSMIFALPEAIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLS
:.::...:.:::.::.: . . . : .: .: :: . .: .:::.: :::...:::.
NP_002 WVVSVLLAVPEAVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE0 IISVYYSLIARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLY
:::.:: ::.:: ::. :.: : . :..::.:.:::.:. :::.:. : .::.:::.::
NP_002 IISIYYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILY
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE0 LYHSFTSQTYVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAE
.:.:: . . .::: :.: :. .:::.:.:::::::::: ::.::..::..:: :: .
NP_002 MYRSF-NYNEIDPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQL-CCGRK
290 300 310 320 330 340
360 370 380 390
pF1KE0 RPEPPVADTSLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
. .. :.. :: : ... .: :: ..: :.::
NP_002 SYQERGTSYLLSSSAVRMTSLKSNAKNMVTNSVL-LNGHSMKQEMAL
350 360 370 380 390
>>XP_011534148 (OMIM: 162341) PREDICTED: neuromedin-B re (283 aa)
initn: 750 init1: 385 opt: 764 Z-score: 800.1 bits: 156.4 E(85289): 7.9e-38
Smith-Waterman score: 764; 47.2% identity (76.4% similar) in 250 aa overlap (145-394:34-279)
120 130 140 150 160 170
pF1KE0 FGRIGCKVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIV
::.:.:.:.. : :.:.:.::::: .:.:
XP_011 VESLACFETTGEIVNFWTPIFRLDCLIWFRRYRAIVNPMDMQTSGALLRTCVKAMGIWVV
10 20 30 40 50 60
180 190 200 210 220 230
pF1KE0 SMIFALPEAIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIIS
:...:.:::.::.: . . . : .: .: :: . .: .:::.: :::...:::.:::
XP_011 SVLLAVPEAVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIIS
70 80 90 100 110 120
240 250 260 270 280 290
pF1KE0 VYYSLIARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYH
.:: ::.:: ::. :.: : . :..::.:.:::.:. :::.:. : .::.:::.::.:.
XP_011 IYYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYR
130 140 150 160 170 180
300 310 320 330 340 350
pF1KE0 SFTSQTYVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPE
:: . . .::: :.: :. .:::.:.:::::::::: ::.::..::..:: :: . .
XP_011 SF-NYNEIDPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQL-CCGRKSYQ
190 200 210 220 230 240
360 370 380 390
pF1KE0 PPVADTSLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
.. :.. :: : ... .: :: ..: :.::
XP_011 ERGTSYLLSSSAVRMTSLKSNAKNMVTNSVL-LNGHSMKQEMAL
250 260 270 280
>>XP_016866390 (OMIM: 162341) PREDICTED: neuromedin-B re (301 aa)
initn: 743 init1: 385 opt: 757 Z-score: 792.6 bits: 155.1 E(85289): 2.1e-37
Smith-Waterman score: 757; 47.0% identity (76.3% similar) in 249 aa overlap (146-394:53-297)
120 130 140 150 160 170
pF1KE0 GRIGCKVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVS
:.:.:.:.. : :.:.:.::::: .:.::
XP_016 QGAWLSAVRTHRRPEHFGAYAAHGASALCWYRAIVNPMDMQTSGALLRTCVKAMGIWVVS
30 40 50 60 70 80
180 190 200 210 220 230
pF1KE0 MIFALPEAIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISV
...:.:::.::.: . . . : .: .: :: . .: .:::.: :::...:::.:::.
XP_016 VLLAVPEAVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISI
90 100 110 120 130 140
240 250 260 270 280 290
pF1KE0 YYSLIARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHS
:: ::.:: ::. :.: : . :..::.:.:::.:. :::.:. : .::.:::.::.:.:
XP_016 YYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRS
150 160 170 180 190 200
300 310 320 330 340 350
pF1KE0 FTSQTYVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEP
: . . .::: :.: :. .:::.:.:::::::::: ::.::..::..:: :: . .
XP_016 F-NYNEIDPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQL-CCGRKSYQE
210 220 230 240 250
360 370 380 390
pF1KE0 PVADTSLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
.. :.. :: : ... .: :: ..: :.::
XP_016 RGTSYLLSSSAVRMTSLKSNAKNMVTNSVL-LNGHSMKQEMAL
260 270 280 290 300
>>XP_016866391 (OMIM: 162341) PREDICTED: neuromedin-B re (242 aa)
initn: 708 init1: 385 opt: 722 Z-score: 757.6 bits: 148.3 E(85289): 1.8e-35
Smith-Waterman score: 722; 46.7% identity (75.6% similar) in 242 aa overlap (153-394:1-238)
130 140 150 160 170 180
pF1KE0 LSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFALPE
.. : :.:.:.::::: .:.::...:.::
XP_016 MDMQTSGALLRTCVKAMGIWVVSVLLAVPE
10 20 30
190 200 210 220 230 240
pF1KE0 AIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLIAR
:.::.: . . . : .: .: :: . .: .:::.: :::...:::.:::.:: ::.
XP_016 AVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAK
40 50 60 70 80
250 260 270 280 290 300
pF1KE0 TLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQTYV
:: ::. :.: : . :..::.:.:::.:. :::.:. : .::.:::.::.:.:: . . .
XP_016 TLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSF-NYNEI
90 100 110 120 130 140
310 320 330 340 350 360
pF1KE0 DPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADTSL
::: :.: :. .:::.:.:::::::::: ::.::..::..:: :: . . .. :
XP_016 DPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQL-CCGRKSYQERGTSYLL
150 160 170 180 190 200
370 380 390
pF1KE0 TTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
.. :: : ... .: :: ..: :.::
XP_016 SSSAVRMTSLKSNAKNMVTNSVL-LNGHSMKQEMAL
210 220 230 240
>>NP_001311236 (OMIM: 162341) neuromedin-B receptor isof (242 aa)
initn: 708 init1: 385 opt: 722 Z-score: 757.6 bits: 148.3 E(85289): 1.8e-35
Smith-Waterman score: 722; 46.7% identity (75.6% similar) in 242 aa overlap (153-394:1-238)
130 140 150 160 170 180
pF1KE0 LSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFALPE
.. : :.:.:.::::: .:.::...:.::
NP_001 MDMQTSGALLRTCVKAMGIWVVSVLLAVPE
10 20 30
190 200 210 220 230 240
pF1KE0 AIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLIAR
:.::.: . . . : .: .: :: . .: .:::.: :::...:::.:::.:: ::.
NP_001 AVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAK
40 50 60 70 80
250 260 270 280 290 300
pF1KE0 TLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQTYV
:: ::. :.: : . :..::.:.:::.:. :::.:. : .::.:::.::.:.:: . . .
NP_001 TLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSF-NYNEI
90 100 110 120 130 140
310 320 330 340 350 360
pF1KE0 DPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADTSL
::: :.: :. .:::.:.:::::::::: ::.::..::..:: :: . . .. :
NP_001 DPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQL-CCGRKSYQERGTSYLL
150 160 170 180 190 200
370 380 390
pF1KE0 TTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
.. :: : ... .: :: ..: :.::
NP_001 SSSAVRMTSLKSNAKNMVTNSVL-LNGHSMKQEMAL
210 220 230 240
>>NP_001311237 (OMIM: 162341) neuromedin-B receptor isof (242 aa)
initn: 708 init1: 385 opt: 722 Z-score: 757.6 bits: 148.3 E(85289): 1.8e-35
Smith-Waterman score: 722; 46.7% identity (75.6% similar) in 242 aa overlap (153-394:1-238)
130 140 150 160 170 180
pF1KE0 LSFIRLTSVGVSVFTLTILSADRYKAVVKPLERQPSNAILKTCVKAGCVWIVSMIFALPE
.. : :.:.:.::::: .:.::...:.::
NP_001 MDMQTSGALLRTCVKAMGIWVVSVLLAVPE
10 20 30
190 200 210 220 230 240
pF1KE0 AIFSNVYTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLIAR
:.::.: . . . : .: .: :: . .: .:::.: :::...:::.:::.:: ::.
NP_001 AVFSEVARISSLD-NSSFTACIPYPQTDELHPKIHSVLIFLVYFLIPLAIISIYYYHIAK
40 50 60 70 80
250 260 270 280 290 300
pF1KE0 TLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQTYV
:: ::. :.: : . :..::.:.:::.:. :::.:. : .::.:::.::.:.:: . . .
NP_001 TLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFIFCWFPNHILYMYRSF-NYNEI
90 100 110 120 130 140
310 320 330 340 350 360
pF1KE0 DPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADTSL
::: :.: :. .:::.:.:::::::::: ::.::..::..:: :: . . .. :
NP_001 DPSLGHMIVTLVARVLSFGNSCVNPFALYLLSESFRRHFNSQL-CCGRKSYQERGTSYLL
150 160 170 180 190 200
370 380 390
pF1KE0 TTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
.. :: : ... .: :: ..: :.::
NP_001 SSSAVRMTSLKSNAKNMVTNSVL-LNGHSMKQEMAL
210 220 230 240
>>NP_000106 (OMIM: 131244,277580,600155,600501) endothel (442 aa)
initn: 545 init1: 348 opt: 590 Z-score: 618.7 bits: 123.5 E(85289): 1e-27
Smith-Waterman score: 590; 32.9% identity (67.4% similar) in 310 aa overlap (52-350:106-407)
30 40 50 60 70 80
pF1KE0 SSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISVGILGNAILIKVFFKTKSMQTV
.. ... .::.::. :.....:.: :..
NP_000 RTAGSPPRTISPPPCQGPIEIKETFKYINTVVSCLVFVLGIIGNSTLLRIIYKNKCMRNG
80 90 100 110 120 130
90 100 110 120 130 140
pF1KE0 PNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGCKVLSFIRLTSVGVSVFTLTIL
:::.:.:::.:::: .. .:... . ::: : :: ::.. ::. .:::..:..: :
NP_000 PNILIASLALGDLLHIVIDIPINVYKLLAEDWPFGAEMCKLVPFIQKASVGITVLSLCAL
140 150 160 170 180 190
150 160 170 180 190 200
pF1KE0 SADRYKAVVKPLERQPSNAILK-TCVKAGCVWIVSMIFALPEAIFSNVYTFRDPNKNMTF
: :::.::.. : . .. : : :. .:.::...:.:::: .. :. :. .
NP_000 SIDRYRAVAS-WSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDIITM--DYKGSYL
200 210 220 230 240 250
210 220 230 240 250
pF1KE0 ESCTSYPVSKKLLQEIHSLL----CFLVFYIIPLSIISVYYSLIARTLYKSTLNIPTEEQ
. : .::.: ...... : .. .::.: . .:.:.. . .. .. .
NP_000 RICLLHPVQKTAFMQFYKTAKDWWLFSFYFCLPLAITAFFYTLMTCEMLRKKSGMQIALN
260 270 280 290 300 310
260 270 280 290 300 310
pF1KE0 SHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQTYVDPSAMHFI--FTIF
.: .. :...:.::. :: .::::::: :: . . .: . ::. ... . ..
NP_000 DHLKQ----RREVAKTVFCLVLVFALCWLPLHLSRILK-LTLYNQNDPNRCELLSFLLVL
320 330 340 350 360
320 330 340 350 360 370
pF1KE0 SRV---LAFSNSCVNPFALYWLSKSFQKHFKAQLFC-CKAERPEPPVADTSLTTLAVMGT
. . .: :::.::.::: .:: :.. ::. : : :..
NP_000 DYIGINMASLNSCINPIALYLVSKRFKNCFKSCLCCWCQSFEEKQSLEEKQSCLKFKAND
370 380 390 400 410 420
380 390
pF1KE0 VPGTGSIQMSEISVTSFTGCSVKQAEDRF
NP_000 HGYDNFRSSNKYSSS
430 440
>>NP_001116131 (OMIM: 131244,277580,600155,600501) endot (442 aa)
initn: 545 init1: 348 opt: 590 Z-score: 618.7 bits: 123.5 E(85289): 1e-27
Smith-Waterman score: 590; 32.9% identity (67.4% similar) in 310 aa overlap (52-350:106-407)
30 40 50 60 70 80
pF1KE0 SSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISVGILGNAILIKVFFKTKSMQTV
.. ... .::.::. :.....:.: :..
NP_001 RTAGSPPRTISPPPCQGPIEIKETFKYINTVVSCLVFVLGIIGNSTLLRIIYKNKCMRNG
80 90 100 110 120 130
90 100 110 120 130 140
pF1KE0 PNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGCKVLSFIRLTSVGVSVFTLTIL
:::.:.:::.:::: .. .:... . ::: : :: ::.. ::. .:::..:..: :
NP_001 PNILIASLALGDLLHIVIDIPINVYKLLAEDWPFGAEMCKLVPFIQKASVGITVLSLCAL
140 150 160 170 180 190
150 160 170 180 190 200
pF1KE0 SADRYKAVVKPLERQPSNAILK-TCVKAGCVWIVSMIFALPEAIFSNVYTFRDPNKNMTF
: :::.::.. : . .. : : :. .:.::...:.:::: .. :. :. .
NP_001 SIDRYRAVAS-WSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDIITM--DYKGSYL
200 210 220 230 240 250
210 220 230 240 250
pF1KE0 ESCTSYPVSKKLLQEIHSLL----CFLVFYIIPLSIISVYYSLIARTLYKSTLNIPTEEQ
. : .::.: ...... : .. .::.: . .:.:.. . .. .. .
NP_001 RICLLHPVQKTAFMQFYKTAKDWWLFSFYFCLPLAITAFFYTLMTCEMLRKKSGMQIALN
260 270 280 290 300 310
260 270 280 290 300 310
pF1KE0 SHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTSQTYVDPSAMHFI--FTIF
.: .. :...:.::. :: .::::::: :: . . .: . ::. ... . ..
NP_001 DHLKQ----RREVAKTVFCLVLVFALCWLPLHLSRILK-LTLYNQNDPNRCELLSFLLVL
320 330 340 350 360
320 330 340 350 360 370
pF1KE0 SRV---LAFSNSCVNPFALYWLSKSFQKHFKAQLFC-CKAERPEPPVADTSLTTLAVMGT
. . .: :::.::.::: .:: :.. ::. : : :..
NP_001 DYIGINMASLNSCINPIALYLVSKRFKNCFKSCLCCWCQSFEEKQSLEEKQSCLKFKAND
370 380 390 400 410 420
380 390
pF1KE0 VPGTGSIQMSEISVTSFTGCSVKQAEDRF
NP_001 HGYDNFRSSNKYSSS
430 440
399 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:47:39 2016 done: Thu Nov 3 18:47:41 2016
Total Scan time: 8.340 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]