FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0275, 174 aa 1>>>pF1KE0275 174 - 174 aa - 174 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5240+/-0.000563; mu= 8.4025+/- 0.034 mean_var=112.7777+/-22.157, 0's: 0 Z-trim(116.8): 5 B-trim: 0 in 0/53 Lambda= 0.120771 statistics sampled from 17478 (17480) to 17478 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.854), E-opt: 0.2 (0.537), width: 16 Scan time: 2.080 The best scores are: opt bits E(32554) CCDS42298.1 C17orf50 gene_id:146853|Hs108|chr17 ( 174) 1227 223.1 6.9e-59 >>CCDS42298.1 C17orf50 gene_id:146853|Hs108|chr17 (174 aa) initn: 1227 init1: 1227 opt: 1227 Z-score: 1170.6 bits: 223.1 E(32554): 6.9e-59 Smith-Waterman score: 1227; 100.0% identity (100.0% similar) in 174 aa overlap (1-174:1-174) 10 20 30 40 50 60 pF1KE0 MDKHGVKTPLWKKETEELRAEDAEQEEGKEGSEDEDEDNQRPLEDSATEGEEPPRVAEEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MDKHGVKTPLWKKETEELRAEDAEQEEGKEGSEDEDEDNQRPLEDSATEGEEPPRVAEEG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 EGRERRSVSYCPLRQESSTQQVALLRRADSGFWGWLGPLALLGGLTAPTDRKRSLPEEPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EGRERRSVSYCPLRQESSTQQVALLRRADSGFWGWLGPLALLGGLTAPTDRKRSLPEEPC 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 VLEIRRRPPRRGGCACCELLFCKKCRSLHSHPAYVAHCVLDHPDLGKAGAAGNS :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VLEIRRRPPRRGGCACCELLFCKKCRSLHSHPAYVAHCVLDHPDLGKAGAAGNS 130 140 150 160 170 174 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 18:00:14 2016 done: Thu Nov 3 18:00:14 2016 Total Scan time: 2.080 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]