Result of FASTA (omim) for pF1KE0281
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0281, 234 aa
  1>>>pF1KE0281 234 - 234 aa - 234 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0167+/-0.00033; mu= 12.8917+/- 0.020
 mean_var=144.4727+/-28.881, 0's: 0 Z-trim(121.3): 92  B-trim: 622 in 1/50
 Lambda= 0.106704
 statistics sampled from 37595 (37728) to 37595 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.794), E-opt: 0.2 (0.442), width:  16
 Scan time:  6.300

The best scores are:                                      opt bits E(85289)
NP_001025042 (OMIM: 206800,610573) R-spondin-4 iso ( 234) 1748 279.8 2.8e-75
XP_016883328 (OMIM: 206800,610573) PREDICTED: R-sp ( 266) 1495 240.9 1.6e-63
NP_001035096 (OMIM: 206800,610573) R-spondin-4 iso ( 172) 1012 166.3 2.9e-41
XP_016868884 (OMIM: 610575) PREDICTED: R-spondin-2 ( 242)  749 126.0 5.6e-29
NP_848660 (OMIM: 610575) R-spondin-2 isoform 1 pre ( 243)  747 125.7 6.9e-29
XP_011515321 (OMIM: 610575) PREDICTED: R-spondin-2 ( 249)  742 125.0 1.2e-28
XP_011515320 (OMIM: 610575) PREDICTED: R-spondin-2 ( 250)  740 124.7 1.5e-28
NP_116173 (OMIM: 610574) R-spondin-3 precursor [Ho ( 272)  667 113.5 3.8e-25
XP_006710646 (OMIM: 609595,610644) PREDICTED: R-sp ( 263)  652 111.1 1.8e-24
NP_001033722 (OMIM: 609595,610644) R-spondin-1 iso ( 263)  652 111.1 1.8e-24
NP_001229837 (OMIM: 609595,610644) R-spondin-1 iso ( 263)  652 111.1 1.8e-24
XP_016866867 (OMIM: 610574) PREDICTED: R-spondin-3 ( 224)  647 110.3 2.8e-24
NP_001229838 (OMIM: 609595,610644) R-spondin-1 iso ( 236)  628 107.4 2.2e-23
NP_001304871 (OMIM: 610575) R-spondin-2 isoform 3  ( 176)  573 98.8 6.5e-21
XP_016866868 (OMIM: 610574) PREDICTED: R-spondin-3 ( 203)  541 93.9 2.2e-19
NP_001229839 (OMIM: 609595,610644) R-spondin-1 iso ( 200)  456 80.8 1.9e-15
NP_001269792 (OMIM: 610575) R-spondin-2 isoform 2  ( 179)  439 78.2 1.1e-14
NP_001159605 (OMIM: 219000,607830) extracellular m (1976)  226 46.6 0.00037
NP_006191 (OMIM: 600488) proprotein convertase sub ( 913)  218 45.0 0.00053
XP_006714379 (OMIM: 219000,607830) PREDICTED: extr (3936)  226 47.0 0.00057
NP_079350 (OMIM: 219000,607830) extracellular matr (4012)  226 47.0 0.00058
NP_001278238 (OMIM: 167405) proprotein convertase  ( 895)  200 42.2  0.0036
NP_612192 (OMIM: 167405) proprotein convertase sub ( 956)  200 42.2  0.0037
NP_002561 (OMIM: 167405) proprotein convertase sub ( 969)  200 42.2  0.0037


>>NP_001025042 (OMIM: 206800,610573) R-spondin-4 isoform  (234 aa)
 initn: 1748 init1: 1748 opt: 1748  Z-score: 1472.6  bits: 279.8 E(85289): 2.8e-75
Smith-Waterman score: 1748; 100.0% identity (100.0% similar) in 234 aa overlap (1-234:1-234)

               10        20        30        40        50        60
pF1KE0 MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 EGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYLYKGKCLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYLYKGKCLP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 TCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHEEAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHEEAAT
              130       140       150       160       170       180

              190       200       210       220       230    
pF1KE0 CQVLSESRKCPIQRPCPGERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGLQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CQVLSESRKCPIQRPCPGERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGLQP
              190       200       210       220       230    

>>XP_016883328 (OMIM: 206800,610573) PREDICTED: R-spondi  (266 aa)
 initn: 1493 init1: 1493 opt: 1495  Z-score: 1261.5  bits: 240.9 E(85289): 1.6e-63
Smith-Waterman score: 1495; 95.3% identity (96.7% similar) in 211 aa overlap (1-211:1-207)

               10        20        30        40        50        60
pF1KE0 MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 EGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYLYKGKCLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYLYKGKCLP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 TCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHEEAAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHEEAAT
              130       140       150       160       170       180

              190       200       210       220       230          
pF1KE0 CQVLSESRKCPIQRPCPGERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGLQP      
       ::::::::::::::::::    :. . :. :                             
XP_016 CQVLSESRKCPIQRPCPG----GEPQDRHTRLRWERPTGTGRTQITAPQIVSMRLPERPP
              190           200       210       220       230      

XP_016 LAILSCGVHITFPGVLSKEGLPCWVQSQIH
        240       250       260      

>>NP_001035096 (OMIM: 206800,610573) R-spondin-4 isoform  (172 aa)
 initn: 1256 init1: 1012 opt: 1012  Z-score: 861.8  bits: 166.3 E(85289): 2.9e-41
Smith-Waterman score: 1136; 73.5% identity (73.5% similar) in 234 aa overlap (1-234:1-172)

               10        20        30        40        50        60
pF1KE0 MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 EGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYLYKGKCLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYLYKGKCLP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 TCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHEEAAT
       ::::::::::::::::                                            
NP_001 TCPPGTLAHQNTRECQ--------------------------------------------
              130                                                  

              190       200       210       220       230    
pF1KE0 CQVLSESRKCPIQRPCPGERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGLQP
                         ::::::::::::::::::::::::::::::::::::
NP_001 ------------------ERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGLQP
                          140       150       160       170  

>>XP_016868884 (OMIM: 610575) PREDICTED: R-spondin-2 iso  (242 aa)
 initn: 659 init1: 459 opt: 749  Z-score: 641.3  bits: 126.0 E(85289): 5.6e-29
Smith-Waterman score: 749; 46.6% identity (74.0% similar) in 204 aa overlap (22-222:27-226)

                    10        20        30        40        50     
pF1KE0      MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLF
                                 ::.:...   .  : ::. ::..:::: :::.::
XP_016 MQFRLFSFALIILNCMDYSHCQGNRWRRSKRASYVSNPICKGCLSCSKDNGCSRCQQKLF
               10        20        30        40        50        60

          60        70        80        90        100       110    
pF1KE0 LFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGA-TCESCFSQDFCIRCKRQFYLY
       .:.::::.::::.:::.:: ::.: :. ..::: .:   .:.::::.::: .::  :::.
XP_016 FFLRREGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKVGFYLH
               70        80        90       100       110       120

          120       130       140       150       160       170    
pF1KE0 KGKCLPTCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAG
       .:.:.  :: :    ..: :: : ::.: :. :. :..:..:::  ::::.:.:.  .  
XP_016 RGRCFDECPDGFAPLEETMECVG-CEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKP
              130       140        150       160       170         

          180       190         200       210       220       230  
pF1KE0 HEEAATCQVLSESRKCPI-QRPCPG-ERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGL
        ...  : ...:::.: . .: ::: .:.:   :... :  .: ::: .:          
XP_016 VKDTILCPTIAESRRCKMTMRHCPGGKRTP---KAKEKRNKKKKRKLIERAQEQHSVFLA
     180       190       200          210       220       230      

             
pF1KE0 QP    
             
XP_016 TDRANQ
        240  

>>NP_848660 (OMIM: 610575) R-spondin-2 isoform 1 precurs  (243 aa)
 initn: 732 init1: 357 opt: 747  Z-score: 639.6  bits: 125.7 E(85289): 6.9e-29
Smith-Waterman score: 747; 46.1% identity (73.5% similar) in 204 aa overlap (22-222:27-227)

                    10        20        30        40        50     
pF1KE0      MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLF
                                 ::.:...   .  : ::. ::..:::: :::.::
NP_848 MQFRLFSFALIILNCMDYSHCQGNRWRRSKRASYVSNPICKGCLSCSKDNGCSRCQQKLF
               10        20        30        40        50        60

          60        70        80        90        100       110    
pF1KE0 LFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGA-TCESCFSQDFCIRCKRQFYLY
       .:.::::.::::.:::.:: ::.: :. ..::: .:   .:.::::.::: .::  :::.
NP_848 FFLRREGMRQYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKVGFYLH
               70        80        90       100       110       120

          120       130       140       150       160       170    
pF1KE0 KGKCLPTCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAG
       .:.:.  :: :    ..: ::   ::.: :. :. :..:..:::  ::::.:.:.  .  
NP_848 RGRCFDECPDGFAPLEETMECVEGCEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKP
              130       140       150       160       170       180

          180       190         200       210       220       230  
pF1KE0 HEEAATCQVLSESRKCPI-QRPCPG-ERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGL
        ...  : ...:::.: . .: ::: .:.:   :... :  .: ::: .:          
NP_848 VKDTILCPTIAESRRCKMTMRHCPGGKRTP---KAKEKRNKKKKRKLIERAQEQHSVFLA
              190       200       210          220       230       

             
pF1KE0 QP    
             
NP_848 TDRANQ
       240   

>>XP_011515321 (OMIM: 610575) PREDICTED: R-spondin-2 iso  (249 aa)
 initn: 640 init1: 440 opt: 742  Z-score: 635.3  bits: 125.0 E(85289): 1.2e-28
Smith-Waterman score: 742; 48.2% identity (74.9% similar) in 191 aa overlap (35-222:47-233)

           10        20        30        40        50        60    
pF1KE0 LCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRREGIR
                                     : ::. ::..:::: :::.::.:.::::.:
XP_011 DYSHCQGNRWRRSKRGGSLSAKASYVSNPICKGCLSCSKDNGCSRCQQKLFFFLRREGMR
         20        30        40        50        60        70      

           70        80        90        100       110       120   
pF1KE0 QYGKCLHDCPPGYFGIRGQEVNRCKKCGA-TCESCFSQDFCIRCKRQFYLYKGKCLPTCP
       :::.:::.:: ::.: :. ..::: .:   .:.::::.::: .::  :::..:.:.  ::
XP_011 QYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKVGFYLHRGRCFDECP
         80        90       100       110       120       130      

           130       140       150       160       170       180   
pF1KE0 PGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHEEAATCQV
        :    ..: :: : ::.: :. :. :..:..:::  ::::.:.:.  .   ...  : .
XP_011 DGFAPLEETMECVG-CEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKPVKDTILCPT
        140       150        160       170       180       190     

           190         200       210       220       230        
pF1KE0 LSESRKCPI-QRPCPG-ERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGLQP    
       ..:::.: . .: ::: .:.:   :... :  .: ::: .:                
XP_011 IAESRRCKMTMRHCPGGKRTP---KAKEKRNKKKKRKLIERAQEQHSVFLATDRANQ
         200       210          220       230       240         

>>XP_011515320 (OMIM: 610575) PREDICTED: R-spondin-2 iso  (250 aa)
 initn: 725 init1: 357 opt: 740  Z-score: 633.7  bits: 124.7 E(85289): 1.5e-28
Smith-Waterman score: 740; 47.6% identity (74.3% similar) in 191 aa overlap (35-222:47-234)

           10        20        30        40        50        60    
pF1KE0 LCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTGCIICSEENGCSTCQQRLFLFIRREGIR
                                     : ::. ::..:::: :::.::.:.::::.:
XP_011 DYSHCQGNRWRRSKRGGSLSAKASYVSNPICKGCLSCSKDNGCSRCQQKLFFFLRREGMR
         20        30        40        50        60        70      

           70        80        90        100       110       120   
pF1KE0 QYGKCLHDCPPGYFGIRGQEVNRCKKCGA-TCESCFSQDFCIRCKRQFYLYKGKCLPTCP
       :::.:::.:: ::.: :. ..::: .:   .:.::::.::: .::  :::..:.:.  ::
XP_011 QYGECLHSCPSGYYGHRAPDMNRCARCRIENCDSCFSKDFCTKCKVGFYLHRGRCFDECP
         80        90       100       110       120       130      

           130       140       150       160       170       180   
pF1KE0 PGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHEEAATCQV
        :    ..: ::   ::.: :. :. :..:..:::  ::::.:.:.  .   ...  : .
XP_011 DGFAPLEETMECVEGCEVGHWSEWGTCSRNNRTCGFKWGLETRTRQIVKKPVKDTILCPT
        140       150       160       170       180       190      

           190         200       210       220       230        
pF1KE0 LSESRKCPI-QRPCPG-ERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQPGLQP    
       ..:::.: . .: ::: .:.:   :... :  .: ::: .:                
XP_011 IAESRRCKMTMRHCPGGKRTP---KAKEKRNKKKKRKLIERAQEQHSVFLATDRANQ
        200       210          220       230       240       250

>>NP_116173 (OMIM: 610574) R-spondin-3 precursor [Homo s  (272 aa)
 initn: 619 init1: 431 opt: 667  Z-score: 572.5  bits: 113.5 E(85289): 3.8e-25
Smith-Waterman score: 667; 43.3% identity (69.2% similar) in 201 aa overlap (22-217:28-225)

                     10        20        30         40        50   
pF1KE0       MRAPLCLLLLVAHAVDMLALNRRKKQVGTGLGGNCTG-CIICSEENGCSTCQQR
                                  ::....  ... .: : :  ::. ::: .:. :
NP_116 MHLRLISWLFIILNFMEYIGSQNASRGRRQRRMHPNVSQGCQGGCATCSDYNGCLSCKPR
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KE0 LFLFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYL
       ::. ..: :..: : :: .:: ::.: :  ..:.: :: : :..::...:: .::  :::
NP_116 LFFALERIGMKQIGVCLSSCPSGYYGTRYPDINKCTKCKADCDTCFNKNFCTKCKSGFYL
               70        80        90       100       110       120

           120       130         140       150       160       170 
pF1KE0 YKGKCLPTCPPGTLAHQNTRECQG--ECELGPWGGWSPCTHNGKTCGSAWGLESRVREAG
       . :::: .:: :  :...: :: .  .::.. :. :::::..:::::   : :.::::  
NP_116 HLGKCLDNCPEGLEANNHTMECVSIVHCEVSEWNPWSPCTKKGKTCGFKRGTETRVREII
              130       140       150       160       170       180

             180       190         200       210       220         
pF1KE0 RAGHEEAATCQVLSESRKCPIQRP-CP-GERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQ
       .    ..  :   .:.::: .::  :  :::.   ::::. .: . ..            
NP_116 QHPSAKGNLCPPTNETRKCTVQRKKCQKGERG---KKGRERKRKKPNKGESKEAIPDSKS
              190       200       210          220       230       

     230                                  
pF1KE0 PGLQP                              
                                          
NP_116 LESSKEIPEQRENKQQQKKRKVQDKQKSVSVSTVH
       240       250       260       270  

>>XP_006710646 (OMIM: 609595,610644) PREDICTED: R-spondi  (263 aa)
 initn: 554 init1: 245 opt: 652  Z-score: 560.2  bits: 111.1 E(85289): 1.8e-24
Smith-Waterman score: 652; 38.6% identity (68.2% similar) in 233 aa overlap (1-222:1-230)

               10        20             30         40        50    
pF1KE0 MRAPLCLLLLVAHAVDMLALNR-----RKKQVGTGLGGNCT-GCIICSEENGCSTCQQRL
       ::  ::.. ::   . .   .:     :......  .  :. :: .::: :::  :. .:
XP_006 MRLGLCVVALVLSWTHLTISSRGIKGKRQRRISAEGSQACAKGCELCSEVNGCLKCSPKL
               10        20        30        40        50        60

           60        70        80        90        100       110   
pF1KE0 FLFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGAT-CESCFSQDFCIRCKRQFYL
       :....:. ::: : :: .::::::  :. ..:.: ::    ::.:::..:: .::. .::
XP_006 FILLERNDIRQVGVCLPSCPPGYFDARNPDMNKCIKCKIEHCEACFSHNFCTKCKEGLYL
               70        80        90       100       110       120

           120       130         140       150       160       170 
pF1KE0 YKGKCLPTCPPGTLAHQNTRECQG--ECELGPWGGWSPCTHNGKTCGSAWGLESRVREAG
       .::.: :.:: :. : ..: ::..  .::.. :. :.::... . ::   : : :.:.. 
XP_006 HKGRCYPACPEGSSAANGTMECSSPAQCEMSEWSPWGPCSKKQQLCGFRRGSEERTRRVL
              130       140       150       160       170       180

             180       190         200       210       220         
pF1KE0 RAGHEEAATCQVLSESRKCPIQR-PCP-GERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQ
       .:   . :.:.  .:.:.: ..: ::: :..   ..:: . ::   .:.: :.       
XP_006 HAPVGDHAACSDTKETRRCTVRRVPCPEGQK---RRKGGQGRRENANRNLARKESKEAGA
              190       200       210          220       230       

     230                         
pF1KE0 PGLQP                     
                                 
XP_006 GSRRRKGQQQQQQQGTVGPLTSAGPA
       240       250       260   

>>NP_001033722 (OMIM: 609595,610644) R-spondin-1 isoform  (263 aa)
 initn: 554 init1: 245 opt: 652  Z-score: 560.2  bits: 111.1 E(85289): 1.8e-24
Smith-Waterman score: 652; 38.6% identity (68.2% similar) in 233 aa overlap (1-222:1-230)

               10        20             30         40        50    
pF1KE0 MRAPLCLLLLVAHAVDMLALNR-----RKKQVGTGLGGNCT-GCIICSEENGCSTCQQRL
       ::  ::.. ::   . .   .:     :......  .  :. :: .::: :::  :. .:
NP_001 MRLGLCVVALVLSWTHLTISSRGIKGKRQRRISAEGSQACAKGCELCSEVNGCLKCSPKL
               10        20        30        40        50        60

           60        70        80        90        100       110   
pF1KE0 FLFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGAT-CESCFSQDFCIRCKRQFYL
       :....:. ::: : :: .::::::  :. ..:.: ::    ::.:::..:: .::. .::
NP_001 FILLERNDIRQVGVCLPSCPPGYFDARNPDMNKCIKCKIEHCEACFSHNFCTKCKEGLYL
               70        80        90       100       110       120

           120       130         140       150       160       170 
pF1KE0 YKGKCLPTCPPGTLAHQNTRECQG--ECELGPWGGWSPCTHNGKTCGSAWGLESRVREAG
       .::.: :.:: :. : ..: ::..  .::.. :. :.::... . ::   : : :.:.. 
NP_001 HKGRCYPACPEGSSAANGTMECSSPAQCEMSEWSPWGPCSKKQQLCGFRRGSEERTRRVL
              130       140       150       160       170       180

             180       190         200       210       220         
pF1KE0 RAGHEEAATCQVLSESRKCPIQR-PCP-GERSPGQKKGRKDRRPRKDRKLDRRLDVRPRQ
       .:   . :.:.  .:.:.: ..: ::: :..   ..:: . ::   .:.: :.       
NP_001 HAPVGDHAACSDTKETRRCTVRRVPCPEGQK---RRKGGQGRRENANRNLARKESKEAGA
              190       200       210          220       230       

     230                         
pF1KE0 PGLQP                     
                                 
NP_001 GSRRRKGQQQQQQQGTVGPLTSAGPA
       240       250       260   




234 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 17:48:05 2016 done: Thu Nov  3 17:48:06 2016
 Total Scan time:  6.300 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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