FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0291, 407 aa 1>>>pF1KE0291 407 - 407 aa - 407 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3398+/-0.000808; mu= 14.9857+/- 0.050 mean_var=142.3930+/-27.613, 0's: 0 Z-trim(112.9): 34 B-trim: 36 in 1/52 Lambda= 0.107481 statistics sampled from 13613 (13638) to 13613 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.419), width: 16 Scan time: 3.060 The best scores are: opt bits E(32554) CCDS33562.1 IGSF5 gene_id:150084|Hs108|chr21 ( 407) 2833 450.5 1.3e-126 >>CCDS33562.1 IGSF5 gene_id:150084|Hs108|chr21 (407 aa) initn: 2833 init1: 2833 opt: 2833 Z-score: 2386.4 bits: 450.5 E(32554): 1.3e-126 Smith-Waterman score: 2833; 100.0% identity (100.0% similar) in 407 aa overlap (1-407:1-407) 10 20 30 40 50 60 pF1KE0 MGQKERSTADTLPDLEEWKSAAGLRWWQTAVVDGSGSGNEVIEGPQNARVLKGSQARFNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MGQKERSTADTLPDLEEWKSAAGLRWWQTAVVDGSGSGNEVIEGPQNARVLKGSQARFNC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TVSQGWKLIMWALSDMVVLSVRPMEPIITNDRFTSQRYDQGGNFTSEMIIHNVEPSDSGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 TVSQGWKLIMWALSDMVVLSVRPMEPIITNDRFTSQRYDQGGNFTSEMIIHNVEPSDSGN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 IRCSLQNSRLHGSAYLTVQVMGELFIPSVNLVVAENEPCEVTCLPSHWTRLPDISWELGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 IRCSLQNSRLHGSAYLTVQVMGELFIPSVNLVVAENEPCEVTCLPSHWTRLPDISWELGL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 LVSHSSYYFVPEPSDLQSAVSILALTPQSNGTLTCVATWKSLKARKSATVNLTVIRCPQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LVSHSSYYFVPEPSDLQSAVSILALTPQSNGTLTCVATWKSLKARKSATVNLTVIRCPQD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 TGGGINIPGVLSSLPSLGFSLPTWGKVGLGLAGTMLLTPTCTLTIRCCCCRRRCCGCNCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 TGGGINIPGVLSSLPSLGFSLPTWGKVGLGLAGTMLLTPTCTLTIRCCCCRRRCCGCNCC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 CRCCFCCRRKRGFRIQFQKKSEKEKTNKETETESGNENSGYNSDEQKTTDTASLPPKSCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 CRCCFCCRRKRGFRIQFQKKSEKEKTNKETETESGNENSGYNSDEQKTTDTASLPPKSCE 310 320 330 340 350 360 370 380 390 400 pF1KE0 SSDPEQRNSSCGPPHQRADQRPPRPASHPQASFNLASPEKVSNTTVV ::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SSDPEQRNSSCGPPHQRADQRPPRPASHPQASFNLASPEKVSNTTVV 370 380 390 400 407 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 17:31:27 2016 done: Thu Nov 3 17:31:27 2016 Total Scan time: 3.060 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]