Result of FASTA (ccds) for
pF1KE0321
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0321, 886 aa
1>>>pF1KE0321 886 - 886 aa - 886 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3747+/-0.000896; mu= 8.3789+/- 0.054
mean_var=207.2345+/-41.885, 0's: 0 Z-trim(113.7): 25 B-trim: 0 in 0/52
Lambda= 0.089093
statistics sampled from 14285 (14309) to 14285 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.44), width: 16
Scan time: 4.590
The best scores are: opt bits E(32554)
CCDS1732.3 AGBL5 gene_id:60509|Hs108|chr2 ( 886) 6102 797.5 0
CCDS42665.1 AGBL5 gene_id:60509|Hs108|chr2 ( 717) 4767 625.9 8.2e-179
>>CCDS1732.3 AGBL5 gene_id:60509|Hs108|chr2 (886 aa)
initn: 6102 init1: 6102 opt: 6102 Z-score: 4249.9 bits: 797.5 E(32554): 0
Smith-Waterman score: 6102; 99.9% identity (99.9% similar) in 886 aa overlap (1-886:1-886)
10 20 30 40 50 60
pF1KE0 MELRCGGLLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYESNVWTRP
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS17 MELRCGGLLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 DCAETEFENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DCAETEFENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 RIRDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQLDQRFPENHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 RIRDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQLDQRFPENHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 THSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFPDTSTPRPFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 THSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFPDTSTPRPFRFA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 GKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLIPMLNPDGVVRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 GKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLIPMLNPDGVVRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 HYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYHHVHSRLNSQSSSEHQPSSCLPPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 HYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYHHVHSRLNSQSSSEHQPSSCLPPDA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 PVSDLEKANNLQNEAQCGHSADRHNAEAWKQTEPAEQKLNSVWIMPQQSAGLEESAPDTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 PVSDLEKANNLQNEAQCGHSADRHNAEAWKQTEPAEQKLNSVWIMPQQSAGLEESAPDTI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 PPKESGVAYYVDLHGHASKRGCFMYGNSFSDESTQVENMLYPKLISLNSAHFDFQGCNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 PPKESGVAYYVDLHGHASKRGCFMYGNSFSDESTQVENMLYPKLISLNSAHFDFQGCNFS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 EKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNYNTGRSVNSIPAACHDNGRASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNYNTGRSVNSIPAACHDNGRASP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 PPPPAFPSRYTVELFEQVGRAMAIAALDMAECNPWPRIVLSEHSSLTNLRAWMLKHVRNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 PPPPAFPSRYTVELFEQVGRAMAIAALDMAECNPWPRIVLSEHSSLTNLRAWMLKHVRNS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 RGLSSTLNVGVNKKRGLRTPPKSHNGLPVSCSENTLSRARSFSTGTSAGGSSSSQQNSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 RGLSSTLNVGVNKKRGLRTPPKSHNGLPVSCSENTLSRARSFSTGTSAGGSSSSQQNSPQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 MKNSPSFPFHGSRPAGLPGLGSSTQKVTHRVLGPVREPRSQDRRRQQQPLNHRPAGSLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MKNSPSFPFHGSRPAGLPGLGSSTQKVTHRVLGPVREPRSQDRRRQQQPLNHRPAGSLAP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 SPAPTSSGPASSHKLGSCLLPDSFNIPGSSCSLLSSGDKPEAVMVIGKGLLGTGARMPCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SPAPTSSGPASSHKLGSCLLPDSFNIPGSSCSLLSSGDKPEAVMVIGKGLLGTGARMPCI
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 KTRLQARPRLGRGSPPTRRGMKGSSGPTSPTPRTRESSELELGSCSATPGLPQARPPRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 KTRLQARPRLGRGSPPTRRGMKGSSGPTSPTPRTRESSELELGSCSATPGLPQARPPRPR
790 800 810 820 830 840
850 860 870 880
pF1KE0 SAPAFSPISCSLSDSPSWNCYSRGPLGQPEVCFVPKSPPLTVSPRV
::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SAPAFSPISCSLSDSPSWNCYSRGPLGQPEVCFVPKSPPLTVSPRV
850 860 870 880
>>CCDS42665.1 AGBL5 gene_id:60509|Hs108|chr2 (717 aa)
initn: 4767 init1: 4767 opt: 4767 Z-score: 3323.8 bits: 625.9 E(32554): 8.2e-179
Smith-Waterman score: 4767; 99.9% identity (99.9% similar) in 696 aa overlap (1-696:1-696)
10 20 30 40 50 60
pF1KE0 MELRCGGLLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYESNVWTRP
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS42 MELRCGGLLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 DCAETEFENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DCAETEFENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 RIRDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQLDQRFPENHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RIRDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQLDQRFPENHP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 THSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFPDTSTPRPFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 THSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFPDTSTPRPFRFA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 GKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLIPMLNPDGVVRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKLIPMLNPDGVVRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 HYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYHHVHSRLNSQSSSEHQPSSCLPPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYHHVHSRLNSQSSSEHQPSSCLPPDA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 PVSDLEKANNLQNEAQCGHSADRHNAEAWKQTEPAEQKLNSVWIMPQQSAGLEESAPDTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PVSDLEKANNLQNEAQCGHSADRHNAEAWKQTEPAEQKLNSVWIMPQQSAGLEESAPDTI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 PPKESGVAYYVDLHGHASKRGCFMYGNSFSDESTQVENMLYPKLISLNSAHFDFQGCNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PPKESGVAYYVDLHGHASKRGCFMYGNSFSDESTQVENMLYPKLISLNSAHFDFQGCNFS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 EKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNYNTGRSVNSIPAACHDNGRASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLECNYNTGRSVNSIPAACHDNGRASP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 PPPPAFPSRYTVELFEQVGRAMAIAALDMAECNPWPRIVLSEHSSLTNLRAWMLKHVRNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PPPPAFPSRYTVELFEQVGRAMAIAALDMAECNPWPRIVLSEHSSLTNLRAWMLKHVRNS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 RGLSSTLNVGVNKKRGLRTPPKSHNGLPVSCSENTLSRARSFSTGTSAGGSSSSQQNSPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RGLSSTLNVGVNKKRGLRTPPKSHNGLPVSCSENTLSRARSFSTGTSAGGSSSSQQNSPQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 MKNSPSFPFHGSRPAGLPGLGSSTQKVTHRVLGPVREPRSQDRRRQQQPLNHRPAGSLAP
::::::::::::::::::::::::::::::::::::
CCDS42 MKNSPSFPFHGSRPAGLPGLGSSTQKVTHRVLGPVRGKPVWEPLQHVFGCLGHCWGK
670 680 690 700 710
730 740 750 760 770 780
pF1KE0 SPAPTSSGPASSHKLGSCLLPDSFNIPGSSCSLLSSGDKPEAVMVIGKGLLGTGARMPCI
886 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 16:04:51 2016 done: Thu Nov 3 16:04:52 2016
Total Scan time: 4.590 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]