Result of FASTA (ccds) for
pF1KE0361
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0361, 511 aa
1>>>pF1KE0361 511 - 511 aa - 511 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1484+/-0.000947; mu= 18.7054+/- 0.057
mean_var=63.2592+/-12.665, 0's: 0 Z-trim(105.0): 16 B-trim: 24 in 1/47
Lambda= 0.161255
statistics sampled from 8209 (8215) to 8209 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.252), width: 16
Scan time: 2.940
The best scores are: opt bits E(32554)
CCDS30784.1 AMY1C gene_id:278|Hs108|chr1 ( 511) 3650 858.1 0
CCDS30783.1 AMY1B gene_id:277|Hs108|chr1 ( 511) 3650 858.1 0
CCDS30782.1 AMY1A gene_id:276|Hs108|chr1 ( 511) 3650 858.1 0
CCDS782.1 AMY2B gene_id:280|Hs108|chr1 ( 511) 3550 834.9 0
CCDS783.1 AMY2A gene_id:279|Hs108|chr1 ( 511) 3541 832.8 0
>>CCDS30784.1 AMY1C gene_id:278|Hs108|chr1 (511 aa)
initn: 3650 init1: 3650 opt: 3650 Z-score: 4586.0 bits: 858.1 E(32554): 0
Smith-Waterman score: 3650; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KE0 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
430 440 450 460 470 480
490 500 510
pF1KE0 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
:::::::::::::::::::::::::::::::
CCDS30 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
490 500 510
>>CCDS30783.1 AMY1B gene_id:277|Hs108|chr1 (511 aa)
initn: 3650 init1: 3650 opt: 3650 Z-score: 4586.0 bits: 858.1 E(32554): 0
Smith-Waterman score: 3650; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KE0 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
430 440 450 460 470 480
490 500 510
pF1KE0 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
:::::::::::::::::::::::::::::::
CCDS30 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
490 500 510
>>CCDS30782.1 AMY1A gene_id:276|Hs108|chr1 (511 aa)
initn: 3650 init1: 3650 opt: 3650 Z-score: 4586.0 bits: 858.1 E(32554): 0
Smith-Waterman score: 3650; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KE0 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
430 440 450 460 470 480
490 500 510
pF1KE0 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
:::::::::::::::::::::::::::::::
CCDS30 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
490 500 510
>>CCDS782.1 AMY2B gene_id:280|Hs108|chr1 (511 aa)
initn: 3550 init1: 3550 opt: 3550 Z-score: 4460.3 bits: 834.9 E(32554): 0
Smith-Waterman score: 3550; 97.5% identity (98.4% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KE0 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
::.: ::::::::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS78 MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS78 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMSGN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS78 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLVGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
::::: ::::::::::::::::::::::::.::::::::::::::::::::::::::: :
CCDS78 LDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
: :.::.::::::::::.::: ::::::::::::::::::::::::::::::::::::::
CCDS78 RQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
430 440 450 460 470 480
490 500 510
pF1KE0 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
:::::::::::::::::::::::::::::::
CCDS78 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
490 500 510
>>CCDS783.1 AMY2A gene_id:279|Hs108|chr1 (511 aa)
initn: 3541 init1: 3541 opt: 3541 Z-score: 4448.9 bits: 832.8 E(32554): 0
Smith-Waterman score: 3541; 96.9% identity (98.6% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KE0 MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
::.: ::::::::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS78 MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 NENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLSGL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS78 AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLTGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMWPGDIKAILDKLHNLNSNWFPEG
::::: ::::::::::::::::::::::::.::::::::::::::::::::::::::: :
CCDS78 LDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 FMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 FVPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 RYFENGKDVNDWVGPPNDNGVTKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
: :.::.::::::::::.::: :::::::::::::::::::::::::::: :::::::::
CCDS78 RQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVIFRNVVDGQP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGI
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
CCDS78 FTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCDVISGDKINGNCTGI
430 440 450 460 470 480
490 500 510
pF1KE0 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
:::::::::::::::::::::::::::::::
CCDS78 KIYVSDDGKAHFSISNSAEDPFIAIHAESKL
490 500 510
511 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 14:09:23 2016 done: Thu Nov 3 14:09:23 2016
Total Scan time: 2.940 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]