Result of FASTA (omim) for
pF1KE0405
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0405, 298 aa
1>>>pF1KE0405 298 - 298 aa - 298 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5350+/-0.000353; mu= 14.8583+/- 0.022
mean_var=103.3857+/-22.195, 0's: 0 Z-trim(116.3): 182 B-trim: 1266 in 1/53
Lambda= 0.126137
statistics sampled from 27078 (27390) to 27078 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.321), width: 16
Scan time: 7.550
The best scores are: opt bits E(85289)
NP_054776 (OMIM: 602383) mimecan isoform 2 precurs ( 298) 1946 364.6 1.3e-100
NP_148935 (OMIM: 602383) mimecan isoform 2 precurs ( 298) 1946 364.6 1.3e-100
NP_077727 (OMIM: 602383) mimecan isoform 1 [Homo s ( 356) 1933 362.3 7.8e-100
XP_011536310 (OMIM: 601657) PREDICTED: epiphycan i ( 261) 764 149.4 6.8e-36
NP_004941 (OMIM: 601657) epiphycan precursor [Homo ( 322) 764 149.5 7.9e-36
NP_055174 (OMIM: 605127) opticin precursor [Homo s ( 332) 711 139.9 6.5e-33
XP_011507708 (OMIM: 605127) PREDICTED: opticin iso ( 332) 711 139.9 6.5e-33
NP_003053 (OMIM: 603745) slit homolog 3 protein is (1523) 269 60.1 3.1e-08
NP_001258875 (OMIM: 603745) slit homolog 3 protein (1530) 269 60.1 3.1e-08
NP_002336 (OMIM: 600616) lumican precursor [Homo s ( 338) 258 57.5 4.3e-08
XP_016874406 (OMIM: 125255,610048) PREDICTED: deco ( 359) 237 53.7 6.3e-07
NP_598010 (OMIM: 125255,610048) decorin isoform a ( 359) 237 53.7 6.3e-07
XP_006719333 (OMIM: 125255,610048) PREDICTED: deco ( 359) 237 53.7 6.3e-07
XP_005268750 (OMIM: 125255,610048) PREDICTED: deco ( 359) 237 53.7 6.3e-07
NP_001911 (OMIM: 125255,610048) decorin isoform a ( 359) 237 53.7 6.3e-07
NP_849161 (OMIM: 610867) leucine-rich repeat trans ( 522) 237 53.8 8.2e-07
XP_016859475 (OMIM: 610867) PREDICTED: leucine-ric ( 522) 237 53.8 8.2e-07
XP_016859476 (OMIM: 610867) PREDICTED: leucine-ric ( 522) 237 53.8 8.2e-07
NP_002716 (OMIM: 601914) prolargin precursor [Homo ( 382) 229 52.2 1.8e-06
NP_958505 (OMIM: 601914) prolargin precursor [Homo ( 382) 229 52.2 1.8e-06
NP_079269 (OMIM: 610870) leucine-rich repeat trans ( 518) 223 51.3 4.8e-06
NP_001269857 (OMIM: 610870) leucine-rich repeat tr ( 519) 223 51.3 4.8e-06
NP_001128217 (OMIM: 610870) leucine-rich repeat tr ( 590) 223 51.3 5.2e-06
NP_001269853 (OMIM: 610870) leucine-rich repeat tr ( 590) 223 51.3 5.2e-06
NP_001317299 (OMIM: 610870) leucine-rich repeat tr ( 591) 223 51.3 5.2e-06
NP_055632 (OMIM: 613356) TLR4 interactor with leuc ( 811) 224 51.7 5.8e-06
NP_003052 (OMIM: 603742) slit homolog 1 protein pr (1534) 220 51.2 1.5e-05
XP_016865268 (OMIM: 603745) PREDICTED: slit homolo (1460) 213 49.9 3.5e-05
NP_001333074 (OMIM: 604807) leucine-rich repeat tr ( 660) 195 46.3 0.00019
NP_001333073 (OMIM: 604807) leucine-rich repeat tr ( 660) 195 46.3 0.00019
NP_001333072 (OMIM: 604807) leucine-rich repeat tr ( 660) 195 46.3 0.00019
NP_037363 (OMIM: 604807) leucine-rich repeat trans ( 660) 195 46.3 0.00019
XP_016876624 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
XP_011534913 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
XP_016876623 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
XP_016876620 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
XP_016876619 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
XP_016876618 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
XP_005267547 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
XP_016876622 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
NP_001333075 (OMIM: 604807) leucine-rich repeat tr ( 660) 195 46.3 0.00019
XP_016876621 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 195 46.3 0.00019
NP_004479 (OMIM: 173511) platelet glycoprotein V p ( 560) 189 45.1 0.00037
NP_821079 (OMIM: 610869) leucine-rich repeat trans ( 581) 189 45.2 0.00038
NP_006329 (OMIM: 605492) leucine-rich repeat neuro ( 713) 187 44.9 0.00056
XP_005244884 (OMIM: 605492) PREDICTED: leucine-ric ( 713) 187 44.9 0.00056
NP_963924 (OMIM: 605492) leucine-rich repeat neuro ( 713) 187 44.9 0.00056
XP_011507368 (OMIM: 605492) PREDICTED: leucine-ric ( 713) 187 44.9 0.00056
XP_016855539 (OMIM: 605492) PREDICTED: leucine-ric ( 713) 187 44.9 0.00056
NP_001010847 (OMIM: 615212) leucine-rich repeat-co ( 294) 174 42.1 0.0016
>>NP_054776 (OMIM: 602383) mimecan isoform 2 precursor [ (298 aa)
initn: 1946 init1: 1946 opt: 1946 Z-score: 1927.1 bits: 364.6 E(85289): 1.3e-100
Smith-Waterman score: 1946; 100.0% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KE0 MKTLQSTLLLLLLVPLIKPAPPTQQDSRIIYDYGTDNFEESIFSQDYEDKYLDGKNIKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 MKTLQSTLLLLLLVPLIKPAPPTQQDSRIIYDYGTDNFEESIFSQDYEDKYLDGKNIKEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVPPLPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 ETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVPPLPKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLAENQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 SAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLAENQLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 KLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPESLRVIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 KLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPESLRVIH
190 200 210 220 230 240
250 260 270 280 290
pF1KE0 LQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIGSYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_054 LQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIGSYF
250 260 270 280 290
>>NP_148935 (OMIM: 602383) mimecan isoform 2 precursor [ (298 aa)
initn: 1946 init1: 1946 opt: 1946 Z-score: 1927.1 bits: 364.6 E(85289): 1.3e-100
Smith-Waterman score: 1946; 100.0% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KE0 MKTLQSTLLLLLLVPLIKPAPPTQQDSRIIYDYGTDNFEESIFSQDYEDKYLDGKNIKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_148 MKTLQSTLLLLLLVPLIKPAPPTQQDSRIIYDYGTDNFEESIFSQDYEDKYLDGKNIKEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVPPLPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_148 ETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVPPLPKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLAENQLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_148 SAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLAENQLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 KLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPESLRVIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_148 KLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPESLRVIH
190 200 210 220 230 240
250 260 270 280 290
pF1KE0 LQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIGSYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_148 LQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIGSYF
250 260 270 280 290
>>NP_077727 (OMIM: 602383) mimecan isoform 1 [Homo sapie (356 aa)
initn: 1933 init1: 1933 opt: 1933 Z-score: 1913.3 bits: 362.3 E(85289): 7.8e-100
Smith-Waterman score: 1933; 100.0% identity (100.0% similar) in 296 aa overlap (3-298:61-356)
10 20 30
pF1KE0 MKTLQSTLLLLLLVPLIKPAPPTQQDSRIIYD
::::::::::::::::::::::::::::::
NP_077 FSHSPSHLGLMHRHEHLLRKTTKNFKTATTTLQSTLLLLLLVPLIKPAPPTQQDSRIIYD
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE0 YGTDNFEESIFSQDYEDKYLDGKNIKEKETVIIPNEKSLQLQKDEAITPLPPKKENDEMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 YGTDNFEESIFSQDYEDKYLDGKNIKEKETVIIPNEKSLQLQKDEAITPLPPKKENDEMP
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE0 TCLLCVCLSGSVYCEEVDIDAVPPLPKESAYLYARFNKIKKLTAKDFADIPNLRRLDFTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 TCLLCVCLSGSVYCEEVDIDAVPPLPKESAYLYARFNKIKKLTAKDFADIPNLRRLDFTG
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE0 NLIEDIEDGTFSKLSLLEELSLAENQLLKLPVLPPKLTLFNAKYNKIKSRGIKANAFKKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 NLIEDIEDGTFSKLSLLEELSLAENQLLKLPVLPPKLTLFNAKYNKIKSRGIKANAFKKL
220 230 240 250 260 270
220 230 240 250 260 270
pF1KE0 NNLTFLYLDHNALESVPLNLPESLRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 NNLTFLYLDHNALESVPLNLPESLRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIRL
280 290 300 310 320 330
280 290
pF1KE0 EGNPIVLGKHPNSFICLKRLPIGSYF
::::::::::::::::::::::::::
NP_077 EGNPIVLGKHPNSFICLKRLPIGSYF
340 350
>>XP_011536310 (OMIM: 601657) PREDICTED: epiphycan isofo (261 aa)
initn: 760 init1: 760 opt: 764 Z-score: 765.3 bits: 149.4 E(85289): 6.8e-36
Smith-Waterman score: 764; 48.4% identity (78.9% similar) in 223 aa overlap (74-296:38-259)
50 60 70 80 90 100
pF1KE0 SQDYEDKYLDGKNIKEKETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGS
:. : : :. :...::::::.:.: .
XP_011 LLTPPPQPEKAQEEEEEEESTPRLIDGSSPQEPEFTGVLGPHT-NEDFPTCLLCTCISTT
10 20 30 40 50 60
110 120 130 140 150 160
pF1KE0 VYCEEVDIDAVPPLPKESAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTF
:::.. ..::.:::::..::.:.:::.:::.. .:::.. .:.:.:.:.::: .:.. .:
XP_011 VYCDDHELDAIPPLPKNTAYFYSRFNRIKKINKNDFASLSDLKRIDLTSNLISEIDEDAF
70 80 90 100 110 120
170 180 190 200 210 220
pF1KE0 SKLSLLEELSLAENQLLKLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHN
:: :.:: : .:.. .:: :: ::... . :.. .::: .::: . .: ::: :
XP_011 RKLPQLRELVLRDNKIRQLPELPTTLTFIDISNNRLGRKGIKQEAFKDMYDLHHLYLTDN
130 140 150 160 170 180
230 240 250 260 270 280
pF1KE0 ALESVPLNLPESLRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHP
:. .:: :::.::..::: ::: . .::::.... .::: .:.:::.:::: :.: :
XP_011 NLDHIPLPLPENLRALHLQNNNILEMHEDTFCNVKNLTYIRKALEDIRLDGNPINLSKTP
190 200 210 220 230 240
290
pF1KE0 NSFICLKRLPIGSYF
....:: :::.::
XP_011 QAYMCLPRLPVGSLV
250 260
>>NP_004941 (OMIM: 601657) epiphycan precursor [Homo sap (322 aa)
initn: 783 init1: 760 opt: 764 Z-score: 764.2 bits: 149.5 E(85289): 7.9e-36
Smith-Waterman score: 770; 39.7% identity (68.3% similar) in 325 aa overlap (1-296:1-320)
10 20 30 40 50
pF1KE0 MKTLQSTLLLLLLVPLIKPAPPTQQDSRIIYDYGTDNFEESIFSQD----YEDKYLDGKN
:::: . .: :.. :: .. : :: ..... .. . : ::. .: .
NP_004 MKTLAGLVLGLVIFDAAVTAPTLES---INYD--SETYDATLEDLDNLYNYENIPVDKVE
10 20 30 40 50
60 70 80 90
pF1KE0 IK--------EKETVIIPN--EKSLQLQKDEAITPL------PPKKE---------NDEM
:. ..: . : ::. . ...: :: : . : :...
NP_004 IEIATVMPSGNRELLTPPPQPEKAQEEEEEEESTPRLIDGSSPQEPEFTGVLGPHTNEDF
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE0 PTCLLCVCLSGSVYCEEVDIDAVPPLPKESAYLYARFNKIKKLTAKDFADIPNLRRLDFT
::::::.:.: .:::.. ..::.:::::..::.:.:::.:::.. .:::.. .:.:.:.:
NP_004 PTCLLCTCISTTVYCDDHELDAIPPLPKNTAYFYSRFNRIKKINKNDFASLSDLKRIDLT
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE0 GNLIEDIEDGTFSKLSLLEELSLAENQLLKLPVLPPKLTLFNAKYNKIKSRGIKANAFKK
.::: .:.. .: :: :.:: : .:.. .:: :: ::... . :.. .::: .:::
NP_004 SNLISEIDEDAFRKLPQLRELVLRDNKIRQLPELPTTLTFIDISNNRLGRKGIKQEAFKD
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 LNNLTFLYLDHNALESVPLNLPESLRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIR
. .: ::: : :. .:: :::.::..::: ::: . .::::.... .::: .:.::
NP_004 MYDLHHLYLTDNNLDHIPLPLPENLRALHLQNNNILEMHEDTFCNVKNLTYIRKALEDIR
240 250 260 270 280 290
280 290
pF1KE0 LEGNPIVLGKHPNSFICLKRLPIGSYF
:.:::: :.: :....:: :::.::
NP_004 LDGNPINLSKTPQAYMCLPRLPVGSLV
300 310 320
>>NP_055174 (OMIM: 605127) opticin precursor [Homo sapie (332 aa)
initn: 753 init1: 704 opt: 711 Z-score: 711.9 bits: 139.9 E(85289): 6.5e-33
Smith-Waterman score: 711; 45.8% identity (77.4% similar) in 212 aa overlap (86-297:120-331)
60 70 80 90 100 110
pF1KE0 NIKEKETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVP
. : .::::.::::..::::...:.. .:
NP_055 SPAKSTTAPGTPSSNPTMTRPTTAGLLLSSQPNHGLPTCLVCVCLGSSVYCDDIDLEDIP
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE0 PLPKESAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLA
:::...::::::::.:... :.:: . .:.:.:...::: .:.. .: : :..: :
NP_055 PLPRRTAYLYARFNRISRIRAEDFKGLTKLKRIDLSNNLISSIDNDAFRLLHALQDLILP
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE0 ENQLLKLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPES
:::: ::::: . ..... :...: ::. ::. ...: ::::. : :.:.: :: :
NP_055 ENQLEALPVLPSGIEFLDVRLNRLQSSGIQPAAFRAMEKLQFLYLSDNLLDSIPGPLPLS
210 220 230 240 250 260
240 250 260 270 280 290
pF1KE0 LRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIG
:: .::: : : .. :.:: .. .. : ..:.:::.:::: :. :....:: :::::
NP_055 LRSVHLQNNLIETMQRDVFCDPEEHKHTRRQLEDIRLDGNPINLSLFPSAYFCLPRLPIG
270 280 290 300 310 320
pF1KE0 SYF
.
NP_055 RFT
330
>>XP_011507708 (OMIM: 605127) PREDICTED: opticin isoform (332 aa)
initn: 753 init1: 704 opt: 711 Z-score: 711.9 bits: 139.9 E(85289): 6.5e-33
Smith-Waterman score: 711; 45.8% identity (77.4% similar) in 212 aa overlap (86-297:120-331)
60 70 80 90 100 110
pF1KE0 NIKEKETVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVP
. : .::::.::::..::::...:.. .:
XP_011 SPAKSTTAPGTPSSNPTMTRPTTAGLLLSSQPNHGLPTCLVCVCLGSSVYCDDIDLEDIP
90 100 110 120 130 140
120 130 140 150 160 170
pF1KE0 PLPKESAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLA
:::...::::::::.:... :.:: . .:.:.:...::: .:.. .: : :..: :
XP_011 PLPRRTAYLYARFNRISRIRAEDFKGLTKLKRIDLSNNLISSIDNDAFRLLHALQDLILP
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE0 ENQLLKLPVLPPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPES
:::: ::::: . ..... :...: ::. ::. ...: ::::. : :.:.: :: :
XP_011 ENQLEALPVLPSGIEFLDVRLNRLQSSGIQPAAFRAMEKLQFLYLSDNLLDSIPGPLPLS
210 220 230 240 250 260
240 250 260 270 280 290
pF1KE0 LRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIG
:: .::: : : .. :.:: .. .. : ..:.:::.:::: :. :....:: :::::
XP_011 LRSVHLQNNLIETMQRDVFCDPEEHKHTRRQLEDIRLDGNPINLSLFPSAYFCLPRLPIG
270 280 290 300 310 320
pF1KE0 SYF
.
XP_011 RFT
330
>>NP_003053 (OMIM: 603745) slit homolog 3 protein isofor (1523 aa)
initn: 162 init1: 117 opt: 269 Z-score: 268.9 bits: 60.1 E(85289): 3.1e-08
Smith-Waterman score: 269; 33.0% identity (57.7% similar) in 194 aa overlap (97-282:38-222)
70 80 90 100 110 120
pF1KE0 NEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVP-PLPKESAYLY
:.: ..:: :. . . ::: .:... :
NP_003 VGAAVRARLALALALASVLSGPPAVACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD
10 20 30 40 50 60
130 140 150 160 170 180
pF1KE0 ARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLAENQLLKLPVL
:.: ..: ::: . ::: : . : . :: :.:. :. ::.: : .:.: :: :
NP_003 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL
70 80 90 100 110 120
190 200 210 220 230
pF1KE0 ----PPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPESLR---V
:::: .. . :.:. :: .::. .... : ::.: . . . ..:: .
NP_003 LFQSTPKLTRLDLSENQIQ--GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEI
130 140 150 160 170 180
240 250 260 270 280 290
pF1KE0 IHLQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIGSYF
. :. :::. : .: : :: .::..: . :
NP_003 LTLNNNNISRILVTSF---NHMPKIRT----LRLHSNHLYCDCHLAWLSDWLRQRRTVGQ
190 200 210 220 230
NP_003 FTLCMAPVHLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGL
240 250 260 270 280 290
>>NP_001258875 (OMIM: 603745) slit homolog 3 protein iso (1530 aa)
initn: 162 init1: 117 opt: 269 Z-score: 268.9 bits: 60.1 E(85289): 3.1e-08
Smith-Waterman score: 269; 33.0% identity (57.7% similar) in 194 aa overlap (97-282:38-222)
70 80 90 100 110 120
pF1KE0 NEKSLQLQKDEAITPLPPKKENDEMPTCLLCVCLSGSVYCEEVDIDAVP-PLPKESAYLY
:.: ..:: :. . . ::: .:... :
NP_001 VGAAVRARLALALALASVLSGPPAVACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD
10 20 30 40 50 60
130 140 150 160 170 180
pF1KE0 ARFNKIKKLTAKDFADIPNLRRLDFTGNLIEDIEDGTFSKLSLLEELSLAENQLLKLPVL
:.: ..: ::: . ::: : . : . :: :.:. :. ::.: : .:.: :: :
NP_001 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPEL
70 80 90 100 110 120
190 200 210 220 230
pF1KE0 ----PPKLTLFNAKYNKIKSRGIKANAFKKLNNLTFLYLDHNALESVPLNLPESLR---V
:::: .. . :.:. :: .::. .... : ::.: . . . ..:: .
NP_001 LFQSTPKLTRLDLSENQIQ--GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEI
130 140 150 160 170 180
240 250 260 270 280 290
pF1KE0 IHLQFNNIASITDDTFCKANDTSYIRDRIEEIRLEGNPIVLGKHPNSFICLKRLPIGSYF
. :. :::. : .: : :: .::..: . :
NP_001 LTLNNNNISRILVTSF---NHMPKIRT----LRLHSNHLYCDCHLAWLSDWLRQRRTVGQ
190 200 210 220 230
NP_001 FTLCMAPVHLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGL
240 250 260 270 280 290
>>NP_002336 (OMIM: 600616) lumican precursor [Homo sapie (338 aa)
initn: 261 init1: 123 opt: 258 Z-score: 266.3 bits: 57.5 E(85289): 4.3e-08
Smith-Waterman score: 278; 30.4% identity (58.4% similar) in 214 aa overlap (92-276:35-247)
70 80 90 100 110
pF1KE0 TVIIPNEKSLQLQKDEAITPLPPKKENDEMPTCL-LCVC---LSGSVYCEEVDIDAVPPL
:.: : : ...::.:. . .:: .
NP_002 AFTLFLALIGGTSGQYYDYDFPLSIYGQSSPNCAPECNCPESYPSAMYCDELKLKSVPMV
10 20 30 40 50 60
120 130 140 150 160
pF1KE0 PKESAYLYARFNKIKKLTAKDFADIPNLRRLDFTGNLIED--IEDGTFSKLSLL------
: ::: : :.: .. : : .. .:. : . ::.:. :. .::::. :
NP_002 PPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLLENSKIKGRVFSKLKQLKKLHIN
70 80 90 100 110 120
170 180 190 200 210
pF1KE0 ---------------EELSLAENQLLKLPVLPP--KLTLFNAKYNKIKSRGIKANAFKKL
:.:.:..:.. :: . .::... ..:..: ...: ::: :
NP_002 HNNLTESVGPLPKSLEDLQLTHNKITKLGSFEGLVNLTFIHLQHNRLKEDAVSA-AFKGL
130 140 150 160 170 180
220 230 240 250 260 270
pF1KE0 NNLTFLYLDHNALESVPLNLPESLRVIHLQFNNIASITDDTFCKANDTSYIRDRIEEIRL
..: .: :. : . .: .:: :: ...:. :.:..: :. : . : .:.: .:.
NP_002 KSLEYLDLSFNQIARLPSGLPVSLLTLYLDNNKISNIPDEYFKRFNALQYLRLSHNELAD
190 200 210 220 230 240
280 290
pF1KE0 EGNPIVLGKHPNSFICLKRLPIGSYF
: :
NP_002 SGIPGNSFNVSSLVELDLSYNKLKNIPTVNENLENYYLEVNQLEKFDIKSFCKILGPLSY
250 260 270 280 290 300
298 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:11:19 2016 done: Thu Nov 3 12:11:21 2016
Total Scan time: 7.550 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]