FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0417, 254 aa 1>>>pF1KE0417 254 - 254 aa - 254 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1830+/-0.000822; mu= 3.6986+/- 0.049 mean_var=198.6121+/-40.033, 0's: 0 Z-trim(114.4): 19 B-trim: 0 in 0/53 Lambda= 0.091006 statistics sampled from 14985 (14996) to 14985 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.461), width: 16 Scan time: 2.770 The best scores are: opt bits E(32554) CCDS42168.1 FAM192A gene_id:80011|Hs108|chr16 ( 254) 1662 229.7 1.5e-60 >>CCDS42168.1 FAM192A gene_id:80011|Hs108|chr16 (254 aa) initn: 1662 init1: 1662 opt: 1662 Z-score: 1200.6 bits: 229.7 E(32554): 1.5e-60 Smith-Waterman score: 1662; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254) 10 20 30 40 50 60 pF1KE0 MDGGDDGNLIIKKRFVSEAELDERRKRRQEEWEKVRKPEDPEECPEEVYDPRSLYERLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MDGGDDGNLIIKKRFVSEAELDERRKRRQEEWEKVRKPEDPEECPEEVYDPRSLYERLQE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 QKDRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELKELKEYRNNLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 QKDRKQQEYEEQFKFKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELKELKEYRNNLK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 KVGISQENKKEVEKKLTVKPIETKNKFSQAKLLAGAVKHKSSESGNSVKRLKPDPEPDDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KVGISQENKKEVEKKLTVKPIETKNKFSQAKLLAGAVKHKSSESGNSVKRLKPDPEPDDK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 NQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGAYSGSSDSESSSDSEGTINATGKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 NQEPSSCKSLGNTSLSGPSIHCPSAAVCIGILPGLGAYSGSSDSESSSDSEGTINATGKI 190 200 210 220 230 240 250 pF1KE0 VSSIFRTNTFLEAP :::::::::::::: CCDS42 VSSIFRTNTFLEAP 250 254 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 11:24:54 2016 done: Thu Nov 3 11:24:54 2016 Total Scan time: 2.770 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]