Result of FASTA (ccds) for
pF1KE0471
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0471, 439 aa
1>>>pF1KE0471 439 - 439 aa - 439 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1848+/-0.000858; mu= 5.5623+/- 0.051
mean_var=174.0194+/-35.212, 0's: 0 Z-trim(112.8): 20 B-trim: 8 in 1/50
Lambda= 0.097224
statistics sampled from 13496 (13512) to 13496 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.415), width: 16
Scan time: 3.450
The best scores are: opt bits E(32554)
CCDS33059.1 PNMAL1 gene_id:55228|Hs108|chr19 ( 439) 2946 425.1 6.7e-119
CCDS46124.1 PNMAL1 gene_id:55228|Hs108|chr19 ( 378) 2464 357.5 1.3e-98
CCDS9818.1 PNMA1 gene_id:9240|Hs108|chr14 ( 353) 508 83.1 4.9e-16
CCDS9908.1 MOAP1 gene_id:64112|Hs108|chr14 ( 351) 478 78.9 9.1e-15
CCDS34868.1 PNMA2 gene_id:10687|Hs108|chr8 ( 364) 460 76.4 5.4e-14
CCDS65344.1 PNMA3 gene_id:29944|Hs108|chrX ( 455) 441 73.8 4.1e-13
CCDS35435.2 PNMA3 gene_id:29944|Hs108|chrX ( 463) 441 73.8 4.1e-13
CCDS14718.1 PNMA5 gene_id:114824|Hs108|chrX ( 448) 432 72.5 9.6e-13
>>CCDS33059.1 PNMAL1 gene_id:55228|Hs108|chr19 (439 aa)
initn: 2946 init1: 2946 opt: 2946 Z-score: 2248.1 bits: 425.1 E(32554): 6.7e-119
Smith-Waterman score: 2946; 99.8% identity (100.0% similar) in 439 aa overlap (1-439:1-439)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS33 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
370 380 390 400 410 420
430
pF1KE0 PKAKPEGSPRRATNESRKV
:::::::::::::::::::
CCDS33 PKAKPEGSPRRATNESRKV
430
>>CCDS46124.1 PNMAL1 gene_id:55228|Hs108|chr19 (378 aa)
initn: 2464 init1: 2464 opt: 2464 Z-score: 1883.7 bits: 357.5 E(32554): 1.3e-98
Smith-Waterman score: 2464; 99.7% identity (100.0% similar) in 366 aa overlap (1-366:1-366)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS46 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSRKPCVNKEE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAVAWVSAKNPAP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 MRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQQPAEATASTSRG
::::::
CCDS46 MRKKKKNPERFDLGDHPY
370
>>CCDS9818.1 PNMA1 gene_id:9240|Hs108|chr14 (353 aa)
initn: 490 init1: 307 opt: 508 Z-score: 401.3 bits: 83.1 E(32554): 4.9e-16
Smith-Waterman score: 508; 52.3% identity (78.1% similar) in 155 aa overlap (5-159:1-150)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
:::.:::::::::.:. .:.::: ::: .: .:::::::.... : :: :...:
CCDS98 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
::::.::::.:. .:. ..::::.::.::::.:. . ::.:::::. :. :: :: :
CCDS98 WREENAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
.::.:.: ...:: . . :: :: :. .: :.:
CCDS98 VQDVARVLGFQNPTPTPG----PEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
CCDS98 PGEETFDPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLK
180 190 200 210 220 230
>>CCDS9908.1 MOAP1 gene_id:64112|Hs108|chr14 (351 aa)
initn: 475 init1: 475 opt: 478 Z-score: 378.6 bits: 78.9 E(32554): 9.1e-15
Smith-Waterman score: 478; 38.7% identity (69.1% similar) in 194 aa overlap (5-197:1-193)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
:.. :::::::::... ...::..:: ..:. :::::.:.. :.::: :: :...:
CCDS99 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
:.:: :.::. . .. . .:.:.::.::.:::. . : : ::. ::::: .:: :
CCDS99 RRDENRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMT
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMD-AEIRSREEARAQEA
.. : : .. .:. .: . :: :: :. : :. . :. ..: .. :
CCDS99 VGELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 AEFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKS
.: ::.. : . . . .:
CCDS99 GE-EEFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQ
180 190 200 210 220 230
>>CCDS34868.1 PNMA2 gene_id:10687|Hs108|chr8 (364 aa)
initn: 460 init1: 460 opt: 460 Z-score: 364.8 bits: 76.4 E(32554): 5.4e-14
Smith-Waterman score: 460; 41.3% identity (64.7% similar) in 201 aa overlap (5-205:1-201)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
::. ::::::: : :: ..::.::::: : .:::.:.:. .:. :: :: :.:::
CCDS34 MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
..::..:.:.:. : ...:.:: : :.::::.:. . :.::.:::. :: ::. ::.:
CCDS34 RKQENANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLERLNLFLEKEGQT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAA
. : : . . . :: :. :: .. . : .. : . . : :
CCDS34 VSGMFRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLPMRYRKLRVFSGSAVPAP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 EFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRRAGAKSR
: : . .: : . ::. : ::
CCDS34 EEESFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEA
180 190 200 210 220 230
>>CCDS65344.1 PNMA3 gene_id:29944|Hs108|chrX (455 aa)
initn: 450 init1: 419 opt: 441 Z-score: 349.0 bits: 73.8 E(32554): 4.1e-13
Smith-Waterman score: 448; 34.2% identity (63.5% similar) in 222 aa overlap (5-212:1-222)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
: ..::.::::: ... .: .:. :::::::. :.::::. . :: ::.....:
CCDS65 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
::::..: :.:... .. . .:::.::.:: :.:. . ..:.:::. ::.::. : ::
CCDS65 RREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRT
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPE--NWAEALGVLLGAVVQIIFCMDAEIRSREEARAQE
:. :.: . . :: .::..::. . ... .. . .. : .
CCDS65 VSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPG
120 130 140 150 160 170
180 190 200 210 220
pF1KE0 AAEF--------EEMAAWALAAGRKVKKEP----GLAAEVGSALKAETPNNWNATEDQHE
: : : . : . :.: .. : : .: :.:.:
CCDS65 ALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAAL
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 PTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISE
CCDS65 QQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKR
240 250 260 270 280 290
>>CCDS35435.2 PNMA3 gene_id:29944|Hs108|chrX (463 aa)
initn: 450 init1: 419 opt: 441 Z-score: 348.9 bits: 73.8 E(32554): 4.1e-13
Smith-Waterman score: 448; 34.2% identity (63.5% similar) in 222 aa overlap (5-212:1-222)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
: ..::.::::: ... .: .:. :::::::. :.::::. . :: ::.....:
CCDS35 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
::::..: :.:... .. . .:::.::.:: :.:. . ..:.:::. ::.::. : ::
CCDS35 RREENAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRT
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 WEDVVRLLQLNHPTLSQNQHQPPE--NWAEALGVLLGAVVQIIFCMDAEIRSREEARAQE
:. :.: . . :: .::..::. . ... .. . .. : .
CCDS35 VSDMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPG
120 130 140 150 160 170
180 190 200 210 220
pF1KE0 AAEF--------EEMAAWALAAGRKVKKEP----GLAAEVGSALKAETPNNWNATEDQHE
: : : . : . :.: .. : : .: :.:.:
CCDS35 ALAFDAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAAL
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 PTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISE
CCDS35 QQVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKR
240 250 260 270 280 290
>>CCDS14718.1 PNMA5 gene_id:114824|Hs108|chrX (448 aa)
initn: 459 init1: 432 opt: 432 Z-score: 342.2 bits: 72.5 E(32554): 9.6e-13
Smith-Waterman score: 435; 41.5% identity (73.2% similar) in 164 aa overlap (5-155:1-164)
10 20 30 40 50 60
pF1KE0 MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRALNKIF
::..::::::.::..: ...::..::: .:...::..:... :.:: ::.:...:
CCDS14 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 VREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRT
::.:.::..::... :: .:.: ..::.:: :.:: . . : :::. :: :: :::.
CCDS14 RREDNAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRS
60 70 80 90 100 110
130 140 150 160
pF1KE0 WEDVVRLL--------QLNHPTLSQNQH---QPPEN--WAEALGVLLGAVVQIIFCMDAE
::.: : .:. .. : . .::.. : . : :. :
CCDS14 MTDVARALGCCSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFE
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 IRSREEARAQEAAEFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEP
CCDS14 DWLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFG
180 190 200 210 220 230
439 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:09:15 2016 done: Thu Nov 3 06:09:16 2016
Total Scan time: 3.450 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]