Result of FASTA (omim) for
pF1KE0479
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0479, 315 aa
1>>>pF1KE0479 315 - 315 aa - 315 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3635+/-0.000459; mu= 11.0044+/- 0.029
mean_var=109.2447+/-21.890, 0's: 0 Z-trim(112.5): 43 B-trim: 608 in 2/51
Lambda= 0.122708
statistics sampled from 21409 (21448) to 21409 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.251), width: 16
Scan time: 5.540
The best scores are: opt bits E(85289)
NP_001210 (OMIM: 603420) calumenin isoform a precu ( 315) 2155 392.5 6e-109
NP_001186600 (OMIM: 603420) calumenin isoform c pr ( 323) 2155 392.5 6.1e-109
NP_001124146 (OMIM: 603420) calumenin isoform b pr ( 315) 2004 365.8 6.6e-101
NP_001186601 (OMIM: 603420) calumenin isoform d pr ( 323) 2004 365.8 6.8e-101
NP_001186602 (OMIM: 603420) calumenin isoform e pr ( 224) 1470 271.1 1.5e-72
NP_002892 (OMIM: 602735) reticulocalbin-1 precurso ( 331) 1318 244.3 2.5e-64
XP_016868148 (OMIM: 603420) PREDICTED: calumenin i ( 164) 1110 207.3 1.7e-53
NP_002893 (OMIM: 602584) reticulocalbin-2 isoform ( 317) 735 141.1 2.8e-33
NP_001258766 (OMIM: 602584) reticulocalbin-2 isofo ( 335) 510 101.3 2.9e-21
NP_057260 (OMIM: 614282) 45 kDa calcium-binding pr ( 362) 316 67.0 6.7e-11
NP_057631 (OMIM: 614282) 45 kDa calcium-binding pr ( 348) 209 48.0 3.3e-05
>>NP_001210 (OMIM: 603420) calumenin isoform a precursor (315 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 2077.0 bits: 392.5 E(85289): 6e-109
Smith-Waterman score: 2155; 99.7% identity (99.7% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKT
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
250 260 270 280 290 300
310
pF1KE0 QATDFGEALVRHDEF
:::::::::::::::
NP_001 QATDFGEALVRHDEF
310
>>NP_001186600 (OMIM: 603420) calumenin isoform c precur (323 aa)
initn: 2155 init1: 2155 opt: 2155 Z-score: 2076.9 bits: 392.5 E(85289): 6.1e-109
Smith-Waterman score: 2155; 99.7% identity (99.7% similar) in 315 aa overlap (1-315:9-323)
10 20 30 40 50
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAF
::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_001 MKETDLIIMDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 WKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
250 260 270 280 290 300
300 310
pF1KE0 KYDLFVGSQATDFGEALVRHDEF
:::::::::::::::::::::::
NP_001 KYDLFVGSQATDFGEALVRHDEF
310 320
>>NP_001124146 (OMIM: 603420) calumenin isoform b precur (315 aa)
initn: 2004 init1: 2004 opt: 2004 Z-score: 1932.5 bits: 365.8 E(85289): 6.6e-101
Smith-Waterman score: 2004; 92.4% identity (96.8% similar) in 315 aa overlap (1-315:1-315)
10 20 30 40 50 60
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKT
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
:::::::::::::: ::.:::.::::::: :::.::: :::..::..:: ::. :.:.
NP_001 FDQLTPEESKERLGMIVDKIDADKDGFVTEGELKSWIKHAQKKYIYDNVENQWQEFDMNQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
:::.::.::.:.::: :::::::::::::::::::::::::::::::::::::::::::
NP_001 DGLISWDEYRNVTYGTYLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
250 260 270 280 290 300
310
pF1KE0 QATDFGEALVRHDEF
:::::::::::::::
NP_001 QATDFGEALVRHDEF
310
>>NP_001186601 (OMIM: 603420) calumenin isoform d precur (323 aa)
initn: 2004 init1: 2004 opt: 2004 Z-score: 1932.4 bits: 365.8 E(85289): 6.8e-101
Smith-Waterman score: 2004; 92.4% identity (96.8% similar) in 315 aa overlap (1-315:9-323)
10 20 30 40 50
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAF
::::::::::::::::::::::::::::::::::::::::::::::: ::::
NP_001 MKETDLIIMDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQ
:::::::::::::::::::::: ::.:::.::::::: :::.::: :::..::..:: :
NP_001 LGAEEAKTFDQLTPEESKERLGMIVDKIDADKDGFVTEGELKSWIKHAQKKYIYDNVENQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 WKGHDLNEDGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
:. :.:.:::.::.::.:.::: :::::::::::::::::::::::::::::::::::
NP_001 WQEFDMNQDGLISWDEYRNVTYGTYLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIAT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVD
250 260 270 280 290 300
300 310
pF1KE0 KYDLFVGSQATDFGEALVRHDEF
:::::::::::::::::::::::
NP_001 KYDLFVGSQATDFGEALVRHDEF
310 320
>>NP_001186602 (OMIM: 603420) calumenin isoform e precur (224 aa)
initn: 1469 init1: 1469 opt: 1470 Z-score: 1423.7 bits: 271.1 E(85289): 1.5e-72
Smith-Waterman score: 1470; 96.4% identity (97.8% similar) in 223 aa overlap (1-223:1-223)
10 20 30 40 50 60
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKT
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 MDLRQFLMCLSLCTAFALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYDHDAFLGAEEAKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEF
::::::::::::::::::::::::::::::::::: . . :.
NP_001 HPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGWQAYQGGDR
190 200 210 220
250 260 270 280 290 300
pF1KE0 RDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGS
>>NP_002892 (OMIM: 602735) reticulocalbin-1 precursor [H (331 aa)
initn: 1323 init1: 788 opt: 1318 Z-score: 1275.9 bits: 244.3 E(85289): 2.5e-64
Smith-Waterman score: 1318; 60.8% identity (83.5% similar) in 316 aa overlap (6-315:16-331)
10 20 30 40
pF1KE0 MDLRQFLMCLSLCTAFALSKPTEKKDRV-HHEPQLSDKVHNDAQSFDYGH
.:. : : .::: .:.:: . . .:... .: :::.: :
NP_002 MARGGRGRRLGLALGLLLALVLAPRVLRAKPTVRKERVVRPDSELGERPPEDNQSFQYDH
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 DAFLGAEEAKTFDQLTPEESKERLGKIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDV
.:::: :..::::::::.::::::::::..::.: :::::..::: ::: .:::.:...:
NP_002 EAFLGKEDSKTFDQLTPDESKERLGKIVDRIDNDGDGFVTTEELKTWIKRVQKRYIFDNV
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 ERQWKGHDLNEDGLVSWEEYKNATYGYVLDDP----DPDDGFNYKQMMVRDERRFKMADK
. :: .: ..: .::::::.::::: : .: : .: ..:.:. ::::::: ::
NP_002 AKVWKDYDRDKDDKISWEEYKQATYGYYLGNPAEFHDSSDHHTFKKMLPRDERRFKAADL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 DGDLIATKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTD
.::: ::.:::::::::::...::.::: ::.::::::.:::.: .:::.::.::. :
NP_002 NGDLTATREEFTAFLHPEEFEHMKEIVVLETLEDIDKNGDGFVDQDEYIADMFSHEENGP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 EPEWVKTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKL
::.:: .::::: :::: :.:::.::.: . ::::.:::::.:::::::::::.::: ::
NP_002 EPDWVLSEREQFNEFRDLNKDGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEKL
250 260 270 280 290 300
290 300 310
pF1KE0 TKEEIVDKYDLFVGSQATDFGEALVR-HDEF
:::::......:::::::..:: :.. :::.
NP_002 TKEEILENWNMFVGSQATNYGEDLTKNHDEL
310 320 330
>>XP_016868148 (OMIM: 603420) PREDICTED: calumenin isofo (164 aa)
initn: 1110 init1: 1110 opt: 1110 Z-score: 1081.2 bits: 207.3 E(85289): 1.7e-53
Smith-Waterman score: 1110; 100.0% identity (100.0% similar) in 164 aa overlap (152-315:1-164)
130 140 150 160 170 180
pF1KE0 GLVSWEEYKNATYGYVLDDPDPDDGFNYKQMMVRDERRFKMADKDGDLIATKEEFTAFLH
::::::::::::::::::::::::::::::
XP_016 MMVRDERRFKMADKDGDLIATKEEFTAFLH
10 20 30
190 200 210 220 230 240
pF1KE0 PEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDEPEWVKTEREQFVEFR
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE0 DKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQ
100 110 120 130 140 150
310
pF1KE0 ATDFGEALVRHDEF
::::::::::::::
XP_016 ATDFGEALVRHDEF
160
>>NP_002893 (OMIM: 602584) reticulocalbin-2 isoform a pr (317 aa)
initn: 695 init1: 482 opt: 735 Z-score: 718.4 bits: 141.1 E(85289): 2.8e-33
Smith-Waterman score: 735; 40.8% identity (74.0% similar) in 277 aa overlap (46-315:38-311)
20 30 40 50 60 70
pF1KE0 FALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEE-AKTFDQLTPEESKERLG
:: ..:.::..: . . .: ::...::
NP_002 AALGLLLLCAAAAGAGKAEELHYPLGERRSDYDREALLGVQEDVDEYVKLGHEEQQKRLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KE0 KIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNEDGLVSWEEYKNATY
:..::: :.:::.: .::..::... :.. ......:. .: : : :.:.::. :
NP_002 AIIKKIDLDSDGFLTESELSSWIQMSFKHYAMQEAKQQFVEYDKNSDDTVTWDEYNIQMY
70 80 90 100 110 120
140 150 160 170 180
pF1KE0 GYVLD-DPDP--DDGF--NYKQMMVRDERRFKMADKDGDLIATKEEFTAFLHPEEYDYMK
:.: : . ::. ..... ..:..::. :..:. . ::: :: :::: :::
NP_002 DRVIDFDENTALDDAEEESFRKLHLKDKKRFEKANQDSGPGLSLEEFIAFEHPEEVDYMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 DIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDE-PEWVKTEREQFVEFRDKNRDGK
..:.::..:. :::.:::..:::..:: : : ...: :::. .:...::. ::. ::.
NP_002 EFVIQEALEEHDKNGDGFVSLEEFLGD-YRWDPTANEDPEWILVEKDRFVNDYDKDNDGR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 MDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATDFGEA
.: .: :..:.. :. :: ::. : : : : ::..:::... :::. :.:::.:.
NP_002 LDPQELLPWVVPNNQGIAQEEALHLIDEMDLNGDKKLSEEEILENPDLFLTSEATDYGRQ
250 260 270 280 290 300
310
pF1KE0 LVRHDEF
: ::..
NP_002 L--HDDYFYHDEL
310
>>NP_001258766 (OMIM: 602584) reticulocalbin-2 isoform b (335 aa)
initn: 695 init1: 482 opt: 510 Z-score: 502.8 bits: 101.3 E(85289): 2.9e-21
Smith-Waterman score: 694; 38.6% identity (68.8% similar) in 295 aa overlap (46-315:38-329)
20 30 40 50 60 70
pF1KE0 FALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEE-AKTFDQLTPEESKERLG
:: ..:.::..: . . .: ::...::
NP_001 AALGLLLLCAAAAGAGKAEELHYPLGERRSDYDREALLGVQEDVDEYVKLGHEEQQKRLQ
10 20 30 40 50 60
80 90 100 110 120 130
pF1KE0 KIVSKIDGDKDGFVTVDELKDWIKFAQKRWIYEDVERQWKGHDLNEDGLVSWEEYKNATY
:..::: :.:::.: .::..::... :.. ......:. .: : : :.:.::. :
NP_001 AIIKKIDLDSDGFLTESELSSWIQMSFKHYAMQEAKQQFVEYDKNSDDTVTWDEYNIQMY
70 80 90 100 110 120
140 150 160 170
pF1KE0 GYVLD-------DPDPDDGFNY------KQ----------MMVRDERRFKMADKDGDLIA
:.: : ...: :: . ..:..::. :..:.
NP_001 DRVIDFDENTALDDAEEESFRKEFAICKKQSFCFWLLRFNLHLKDKKRFEKANQDSGPGL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 TKEEFTAFLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYIGDMYSHDGNTDE-PEWV
. ::: :: :::: ::: ..:.::..:. :::.:::..:::..:: : : ...: :::.
NP_001 SLEEFIAFEHPEEVDYMTEFVIQEALEEHDKNGDGFVSLEEFLGD-YRWDPTANEDPEWI
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 KTEREQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEI
.:...::. ::. ::..: .: :..:.. :. :: ::. : : : : ::..:::
NP_001 LVEKDRFVNDYDKDNDGRLDPQELLPWVVPNNQGIAQEEALHLIDEMDLNGDKKLSEEEI
250 260 270 280 290 300
300 310
pF1KE0 VDKYDLFVGSQATDFGEALVRHDEF
... :::. :.:::.:. : ::..
NP_001 LENPDLFLTSEATDYGRQL--HDDYFYHDEL
310 320 330
>>NP_057260 (OMIM: 614282) 45 kDa calcium-binding protei (362 aa)
initn: 340 init1: 191 opt: 316 Z-score: 316.7 bits: 67.0 E(85289): 6.7e-11
Smith-Waterman score: 427; 28.9% identity (65.3% similar) in 291 aa overlap (47-315:77-362)
20 30 40 50 60 70
pF1KE0 ALSKPTEKKDRVHHEPQLSDKVHNDAQSFDYGHDAFLGAEEAKTFDQ-LTPEESKERLGK
. ...::: .. ::. :..:...:
NP_057 RVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLG-KDLGGFDEDAEPRRSRRKLMV
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE0 IVSKIDGDKDGFVTVDELKDWI--KFAQK-RWIYEDVERQWKGHDLNEDGLVSWEEYKN-
: ::.: . : ... :.. :: : :.. . .:. . .... : . :: :::.:::
NP_057 IFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVK
110 120 130 140 150 160
140 150 160 170
pF1KE0 --ATYGYVLDDPDPDDGFNYKQMMVRDER----------RFKMADKD-GDLIATKEEFTA
:. :. .. . :.. .. . ::. :. .::. .::. :.::: .
NP_057 FLASKGH--SEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLS
170 180 190 200 210 220
180 190 200 210 220 230
pF1KE0 FLHPEEYDYMKDIVVQETMEDIDKNADGFIDLEEYI----GDMYSHDGNTDEPEWVKTER
:::::. : ..:.: ..:.:...: ... :.: : . ...:. . .::: ..
NP_057 FLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRK
230 240 250 260 270 280
240 250 260 270 280 290
pF1KE0 EQFVEFRDKNRDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKY
..: :. :.:.:: . :: .... : . .: ::.... .:.:.. .: ::..
NP_057 KEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHLEPEEVLKYS
290 300 310 320 330 340
300 310
pF1KE0 DLFVGSQATDFGEALVRHDEF
..:.::. .:..... :.::
NP_057 EFFTGSKLVDYARSV--HEEF
350 360
315 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:15:22 2016 done: Thu Nov 3 05:15:22 2016
Total Scan time: 5.540 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]