Result of FASTA (ccds) for
pF1KE0481
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0481, 419 aa
1>>>pF1KE0481 419 - 419 aa - 419 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5097+/-0.00102; mu= 11.0127+/- 0.061
mean_var=120.6706+/-26.285, 0's: 0 Z-trim(106.3): 131 B-trim: 471 in 1/51
Lambda= 0.116754
statistics sampled from 8786 (8932) to 8786 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.274), width: 16
Scan time: 2.990
The best scores are: opt bits E(32554)
CCDS54275.1 PSG1 gene_id:5669|Hs108|chr19 ( 419) 2827 487.8 8.1e-138
CCDS12612.1 PSG1 gene_id:5669|Hs108|chr19 ( 426) 2791 481.8 5.5e-136
CCDS59392.1 PSG1 gene_id:5669|Hs108|chr19 ( 417) 2786 480.9 9.6e-136
CCDS74380.1 PSG1 gene_id:5669|Hs108|chr19 ( 428) 2786 480.9 9.8e-136
CCDS46091.1 PSG8 gene_id:440533|Hs108|chr19 ( 419) 2624 453.6 1.6e-127
CCDS33037.1 PSG8 gene_id:440533|Hs108|chr19 ( 426) 2594 448.6 5.3e-126
CCDS12611.1 PSG3 gene_id:5671|Hs108|chr19 ( 428) 2546 440.5 1.5e-123
CCDS46093.1 PSG4 gene_id:5672|Hs108|chr19 ( 419) 2489 430.9 1.1e-120
CCDS12613.1 PSG6 gene_id:5675|Hs108|chr19 ( 435) 2435 421.8 6.2e-118
CCDS33038.1 PSG6 gene_id:5675|Hs108|chr19 ( 424) 2428 420.6 1.4e-117
CCDS12618.1 PSG9 gene_id:5678|Hs108|chr19 ( 426) 2350 407.5 1.3e-113
CCDS46090.1 PSG8 gene_id:440533|Hs108|chr19 ( 297) 1772 310.0 1.9e-84
CCDS77310.1 PSG7 gene_id:5676|Hs108|chr19 ( 297) 1711 299.7 2.4e-81
CCDS12616.1 PSG2 gene_id:5670|Hs108|chr19 ( 335) 1463 258.0 9.9e-69
CCDS12614.2 PSG11 gene_id:5680|Hs108|chr19 ( 335) 1455 256.6 2.5e-68
CCDS33039.1 PSG4 gene_id:5672|Hs108|chr19 ( 326) 1417 250.2 2.1e-66
CCDS77314.1 PSG9 gene_id:5678|Hs108|chr19 ( 333) 1369 242.2 5.7e-64
CCDS82360.1 PSG1 gene_id:5669|Hs108|chr19 ( 326) 1314 232.9 3.5e-61
CCDS12617.1 PSG5 gene_id:5673|Hs108|chr19 ( 335) 1194 212.7 4.3e-55
CCDS62695.1 PSG4 gene_id:5672|Hs108|chr19 ( 326) 1181 210.5 1.9e-54
CCDS77312.1 PSG9 gene_id:5678|Hs108|chr19 ( 333) 1132 202.2 6e-52
CCDS77311.1 PSG9 gene_id:5678|Hs108|chr19 ( 240) 826 150.6 1.5e-36
CCDS12584.1 CEACAM5 gene_id:1048|Hs108|chr19 ( 702) 775 142.4 1.3e-33
CCDS12615.2 PSG11 gene_id:5680|Hs108|chr19 ( 213) 737 135.6 4.6e-32
CCDS12610.1 CEACAM8 gene_id:1088|Hs108|chr19 ( 349) 734 135.2 9.4e-32
CCDS54272.1 CEACAM1 gene_id:634|Hs108|chr19 ( 368) 727 134.1 2.2e-31
CCDS54273.1 CEACAM1 gene_id:634|Hs108|chr19 ( 430) 727 134.1 2.5e-31
CCDS77302.1 CEACAM5 gene_id:1048|Hs108|chr19 ( 701) 722 133.4 6.5e-31
CCDS54274.1 CEACAM1 gene_id:634|Hs108|chr19 ( 461) 714 131.9 1.2e-30
CCDS46089.1 CEACAM1 gene_id:634|Hs108|chr19 ( 464) 714 131.9 1.2e-30
CCDS12609.1 CEACAM1 gene_id:634|Hs108|chr19 ( 526) 714 132.0 1.3e-30
CCDS12585.1 CEACAM6 gene_id:4680|Hs108|chr19 ( 344) 698 129.1 6.2e-30
CCDS46087.1 CEACAM21 gene_id:90273|Hs108|chr19 ( 292) 570 107.5 1.7e-23
CCDS46086.1 CEACAM21 gene_id:90273|Hs108|chr19 ( 293) 570 107.5 1.7e-23
CCDS62685.1 CEACAM3 gene_id:1084|Hs108|chr19 ( 212) 515 98.2 8.2e-21
CCDS12586.2 CEACAM3 gene_id:1084|Hs108|chr19 ( 252) 515 98.2 9.3e-21
CCDS54278.1 CEACAM16 gene_id:388551|Hs108|chr19 ( 425) 453 88.0 1.9e-17
CCDS74392.1 CEACAM20 gene_id:125931|Hs108|chr19 ( 584) 432 84.5 2.9e-16
CCDS74393.1 CEACAM20 gene_id:125931|Hs108|chr19 ( 596) 432 84.5 2.9e-16
CCDS33033.1 CEACAM4 gene_id:1089|Hs108|chr19 ( 244) 425 83.0 3.3e-16
CCDS12583.1 CEACAM7 gene_id:1087|Hs108|chr19 ( 265) 399 78.7 7.4e-15
>>CCDS54275.1 PSG1 gene_id:5669|Hs108|chr19 (419 aa)
initn: 2827 init1: 2827 opt: 2827 Z-score: 2587.8 bits: 487.8 E(32554): 8.1e-138
Smith-Waterman score: 2827; 100.0% identity (100.0% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
370 380 390 400 410
>>CCDS12612.1 PSG1 gene_id:5669|Hs108|chr19 (426 aa)
initn: 2784 init1: 2784 opt: 2791 Z-score: 2554.9 bits: 481.8 E(32554): 5.5e-136
Smith-Waterman score: 2791; 99.0% identity (99.3% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::::::::::::::::::::::::::::::::::::::::::::::::: .:
CCDS12 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSGKWIPA
370 380 390 400 410 420
CCDS12 SLAIGF
>>CCDS59392.1 PSG1 gene_id:5669|Hs108|chr19 (417 aa)
initn: 3105 init1: 2786 opt: 2786 Z-score: 2550.5 bits: 480.9 E(32554): 9.6e-136
Smith-Waterman score: 2786; 99.8% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS59 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSEAL
370 380 390 400 410
>>CCDS74380.1 PSG1 gene_id:5669|Hs108|chr19 (428 aa)
initn: 3105 init1: 2786 opt: 2786 Z-score: 2550.3 bits: 480.9 E(32554): 9.8e-136
Smith-Waterman score: 2786; 99.3% identity (99.8% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS74 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::::::::::::::::::::::::::::::::::::::::::::::::: ..
CCDS74 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSAYSSSI
370 380 390 400 410 420
CCDS74 NYTSGNRN
>>CCDS46091.1 PSG8 gene_id:440533|Hs108|chr19 (419 aa)
initn: 2948 init1: 2624 opt: 2624 Z-score: 2403.0 bits: 453.6 E(32554): 1.6e-127
Smith-Waterman score: 2624; 92.8% identity (96.9% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: ::::::::::::::: ::::::::::.:::::::::::::::::::
CCDS46 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
:::::::::::.::::::::::::::.::::::::::::: ::::::::::::.::::::
CCDS46 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::: : : .:::::.:::::.:::::::::::.:::::.:::::::::::::::::::
CCDS46 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
:::::::::.: :.:::::::::::::::::::::::::::::::::::: :::::::::
CCDS46 WMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::.:::::: ::::::::::::::::::::::::::::::::::::::
CCDS46 TRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::::::::: :::: :::::: .:::::::::.::::::::::::::::::.:::::.:
CCDS46 PAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVKVSDWTLP
370 380 390 400 410
>>CCDS33037.1 PSG8 gene_id:440533|Hs108|chr19 (426 aa)
initn: 2585 init1: 2585 opt: 2594 Z-score: 2375.6 bits: 448.6 E(32554): 5.3e-126
Smith-Waterman score: 2594; 92.1% identity (96.2% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: ::::::::::::::: ::::::::::.:::::::::::::::::::
CCDS33 MGLLSAPPCTQRITWKGLLLTASLLNFWNPPTTAQVTIEAQPTKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
:::::::::::.::::::::::::::.::::::::::::: ::::::::::::.::::::
CCDS33 NLTGYIWYKGQIRDLYHYITSYVVDGQIIIYGPAYSGRETIYSNASLLIQNVTQEDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::: : : .:::::.:::::.:::::::::::.:::::.:::::::::::::::::::
CCDS33 TLHIIMGGDENRGVTGHFTFTLYLETPKPSISSSKLNPREAMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
:::::::::.: :.:::::::::::::::::::::::::::::::::::: :::::::::
CCDS33 WMNGQSLPMSHRLQLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPFTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KPYITINNLKPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::.:::::: ::::::::::::::::::::::::::::::::::::::
CCDS33 TRNETGPYQCEIRDQYGGIRSYPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::::::::: :::: :::::: .:::::::::.::::::::::::::::::.:: .:
CCDS33 PAQYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGKESSKSMTVKVSGKRIPV
370 380 390 400 410 420
CCDS33 SLAIGI
>>CCDS12611.1 PSG3 gene_id:5671|Hs108|chr19 (428 aa)
initn: 2546 init1: 2546 opt: 2546 Z-score: 2331.9 bits: 440.5 E(32554): 1.5e-123
Smith-Waterman score: 2546; 91.5% identity (96.1% similar) in 414 aa overlap (1-414:1-414)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: :::::::: :::::::::::::::::::::::.:::::::::::::
CCDS12 MGPLSAPPCTQRITWKGLLLTALLLNFWNLPTTAQVTIEAEPTKVSKGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::.:::::::::.:::::::::::::.:::::::::::::.:::::::::::::::::::
CCDS12 NLAGYIWYKGQMKDLYHYITSYVVDGQIIIYGPAYSGRETVYSNASLLIQNVTREDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
::::.: ::::: ::.:::::.::::::::::::: ::: :::::::::::::::::::
CCDS12 TLHIVKRGDGTRGETGHFTFTLYLETPKPSISSSNLYPREDMEAVSLTCDPETPDASYLW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
:::::::::::::.::...:::::.:::::::::::::::::::::::::::::::::::
CCDS12 WMNGQSLPMTHSLQLSKNKRTLFLFGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS12 KPYITINNLNPRENKDVLAFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::.:::::::: ::::::::::::::::::::::.::: ::::: :::::
CCDS12 TRNETGPYQCEIQDRYGGIRSYPVTLNVLYGPDLPRIYPSFTYYHSGENLYLSCFADSNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::.:::::: :::: :::::: .:::::::::.::::::::: ::::::::.::
CCDS12 PAEYSWTINGKFQLSGQKLFIPQITTKHSGLYACSVRNSATGMESSKSMTVKVSAPSGTG
370 380 390 400 410 420
CCDS12 HLPGLNPL
>>CCDS46093.1 PSG4 gene_id:5672|Hs108|chr19 (419 aa)
initn: 2813 init1: 2489 opt: 2489 Z-score: 2280.1 bits: 430.9 E(32554): 1.1e-120
Smith-Waterman score: 2489; 88.5% identity (93.6% similar) in 419 aa overlap (1-419:1-419)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: :::::::::: :::.::::::::::: ::::::::::.: :::::::::::::::::
CCDS46 MGPLSAPPCTQRITWKGVLLTASLLNFWNPPTTAQVTIEAQPPKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
::.::::::::: ::::::::::::. ::::::::::: .::::::::::::.::::::
CCDS46 NLAGYIWYKGQMTYLYHYITSYVVDGQRIIYGPAYSGRERVYSNASLLIQNVTQEDAGSY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
:::::: ::: ::::.:::::::::::::::::::::::.:::: ::::: :: ::: :
CCDS46 TLHIIKRRDGTGGVTGHFTFTLHLETPKPSISSSNLNPREAMEAVILTCDPATPAASYQW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
::::::::::: :.::.::::::..::::: ::::::::::::::::::::::::::::
CCDS46 WMNGQSLPMTHRLQLSKTNRTLFIFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::::::::.:::::::.:::::::::::::::::::::::::::::::.:
CCDS46 KPYITINNLNPRENKDVLTFTCEPKSKNYTYIWWLNGQSLPVSPRVKRPIENRILILPNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
::::::::::::::::::::::::::::::::::: :::::::::::: ::::: :.:::
CCDS46 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPSIYPSFTYYRSGENLYLSCFAESNP
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
:::::::: :::: :::: : .:::::::::.:::::::::::::::.::.:::: .:
CCDS46 RAQYSWTINGKFQLSGQKLSIPQITTKHSGLYACSVRNSATGKESSKSITVKVSDWILP
370 380 390 400 410
>>CCDS12613.1 PSG6 gene_id:5675|Hs108|chr19 (435 aa)
initn: 2751 init1: 1914 opt: 2435 Z-score: 2230.7 bits: 421.8 E(32554): 6.2e-118
Smith-Waterman score: 2435; 87.4% identity (92.8% similar) in 419 aa overlap (1-419:1-418)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: ::::::::.: :::::::::::::::::::::: :::.: :::::::::::::::::
CCDS12 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
:::::::::::: ::::::::::: :.:: ::::::::::.::::::::::::.::::::
CCDS12 NLTGYIWYKGQMTDLYHYITSYVVHGQII-YGPAYSGRETVYSNASLLIQNVTQEDAGSY
70 80 90 100 110
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
:::::: ::: :::: :: ::. ::::::::::::::::.:::: : ::::::::::::
CCDS12 TLHIIKRGDGTGGVTGYFTVTLYSETPKPSISSSNLNPREVMEAVRLICDPETPDASYLW
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
.:::.::::: :.::.:::::.:.::::: :::::::::::::::::::::::::::::
CCDS12 LLNGQNLPMTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::.:::: :::::::.:::::::::::::::::::::::::::::::::
CCDS12 MPYITINNLNPREKKDVLAFTCEPKSRNYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
:::::::::::::::::::::.:::::::::::::::::::::::::: : ::: :::::
CCDS12 TRNETGPYQCEIRDRYGGIRSNPVTLNVLYGPDLPRIYPSFTYYRSGENLDLSCFADSNP
300 310 320 330 340 350
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::.:::::: :::: :::::: .:::.:::::.::::::::::: :::: :.::. . :
CCDS12 PAEYSWTINGKFQLSGQKLFIPQITTNHSGLYACSVRNSATGKEISKSMIVKVSETASPQ
360 370 380 390 400 410
CCDS12 VTYAGPNTWFQEILLL
420 430
>>CCDS33038.1 PSG6 gene_id:5675|Hs108|chr19 (424 aa)
initn: 1912 init1: 1912 opt: 2428 Z-score: 2224.5 bits: 420.6 E(32554): 1.4e-117
Smith-Waterman score: 2428; 88.2% identity (93.2% similar) in 414 aa overlap (1-414:1-413)
10 20 30 40 50 60
pF1KE0 MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTKVSEGKDVLLLVHNLPQ
:: ::::::::.: :::::::::::::::::::::: :::.: :::::::::::::::::
CCDS33 MGPLSAPPCTQHITWKGLLLTASLLNFWNLPTTAQVIIEAKPPKVSEGKDVLLLVHNLPQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYSGRETAYSNASLLIQNVTREDAGSY
:::::::::::: ::::::::::: :.:: ::::::::::.::::::::::::.::::::
CCDS33 NLTGYIWYKGQMTDLYHYITSYVVHGQII-YGPAYSGRETVYSNASLLIQNVTQEDAGSY
70 80 90 100 110
130 140 150 160 170 180
pF1KE0 TLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRETMEAVSLTCDPETPDASYLW
:::::: ::: :::: :: ::. ::::::::::::::::.:::: : ::::::::::::
CCDS33 TLHIIKRGDGTGGVTGYFTVTLYSETPKPSISSSNLNPREVMEAVRLICDPETPDASYLW
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 WMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECEIRNPVSASRSDPVTLNLLPKLP
.:::.::::: :.::.:::::.:.::::: :::::::::::::::::::::::::::::
CCDS33 LLNGQNLPMTHRLQLSKTNRTLYLFGVTKYIAGPYECEIRNPVSASRSDPVTLNLLPKLP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 KPYITINNLNPRENKDVLNFTCEPKSENYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
::::::::::::.:::: :::::::.:::::::::::::::::::::::::::::::::
CCDS33 MPYITINNLNPREKKDVLAFTCEPKSRNYTYIWWLNGQSLPVSPRVKRPIENRILILPSV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE0 TRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDLPRIYPSFTYYRSGEVLYLSCSADSNP
:::::::::::::::::::::.:::::::::::::::::::::::::: : ::: :::::
CCDS33 TRNETGPYQCEIRDRYGGIRSNPVTLNVLYGPDLPRIYPSFTYYRSGENLDLSCFADSNP
300 310 320 330 340 350
370 380 390 400 410
pF1KE0 PAQYSWTINEKFQLPGQKLFIRHITTKHSGLYVCSVRNSATGKESSKSMTVEVSDWTVP
::.:::::: :::: :::::: .:::.:::::.::::::::::: :::: :.::
CCDS33 PAEYSWTINGKFQLSGQKLFIPQITTNHSGLYACSVRNSATGKEISKSMIVKVSGPCHGN
360 370 380 390 400 410
CCDS33 QTESH
420
419 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 05:14:08 2016 done: Thu Nov 3 05:14:09 2016
Total Scan time: 2.990 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]