Result of FASTA (omim) for pF1KE0491
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0491, 323 aa
  1>>>pF1KE0491 323 - 323 aa - 323 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3546+/-0.000418; mu= 10.0948+/- 0.026
 mean_var=79.1045+/-15.999, 0's: 0 Z-trim(111.1): 56  B-trim: 0 in 0/54
 Lambda= 0.144203
 statistics sampled from 19619 (19663) to 19619 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.231), width:  16
 Scan time:  7.270

The best scores are:                                      opt bits E(85289)
NP_006069 (OMIM: 602911,614256) voltage-dependent  ( 323) 2109 448.6 7.9e-126
NP_006530 (OMIM: 606403) voltage-dependent calcium ( 315) 1592 341.1 1.8e-93
XP_016884020 (OMIM: 602911,614256) PREDICTED: volt ( 237) 1435 308.4 9.6e-84
NP_055220 (OMIM: 606404) voltage-dependent calcium ( 327) 1271 274.3 2.4e-73
NP_114101 (OMIM: 606900) voltage-dependent calcium ( 425)  764 168.9 1.7e-41
NP_665810 (OMIM: 606405) voltage-dependent calcium ( 275)  418 96.8 5.4e-20
XP_016882582 (OMIM: 606899) PREDICTED: voltage-dep ( 275)  387 90.4 4.7e-18
NP_114102 (OMIM: 606899) voltage-dependent calcium ( 275)  387 90.4 4.7e-18
XP_005259181 (OMIM: 606899) PREDICTED: voltage-dep ( 305)  235 58.8 1.7e-08
NP_001139808 (OMIM: 611579) transmembrane protein  ( 223)  205 52.5 9.7e-07


>>NP_006069 (OMIM: 602911,614256) voltage-dependent calc  (323 aa)
 initn: 2109 init1: 2109 opt: 2109  Z-score: 2380.1  bits: 448.6 E(85289): 7.9e-126
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)

               10        20        30        40        50        60
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 CIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 YFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 SRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVH
              250       260       270       280       290       300

              310       320   
pF1KE0 NCIQKENKDSLHSNTANRRTTPV
       :::::::::::::::::::::::
NP_006 NCIQKENKDSLHSNTANRRTTPV
              310       320   

>>NP_006530 (OMIM: 606403) voltage-dependent calcium cha  (315 aa)
 initn: 1322 init1: 1002 opt: 1592  Z-score: 1798.9  bits: 341.1 E(85289): 1.8e-93
Smith-Waterman score: 1592; 74.6% identity (90.7% similar) in 323 aa overlap (1-323:1-315)

               10        20        30        40        50        60
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTH
       : . :::.:::.::::::::::::::::::::::::::::.:::.:.::::.::::::::
NP_006 MRMCDRGIQMLITTVGAFAAFSLMTIAVGTDYWLYSRGVCRTKSTSDNETSRKNEEVMTH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 SGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGL
       ::::::::::: :.:.::.::::::::::: :::::.::::::::.:::::: :::.:::
NP_006 SGLWRTCCLEGAFRGVCKKIDHFPEDADYEQDTAEYLLRAVRASSVFPILSVTLLFFGGL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 CIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSF
       :.:::::...:::.::::::::::::::::::::::::::::::.. :::: ::::::::
NP_006 CVAASEFHRSRHNVILSAGIFFVSAGLSNIIGIIVYISANAGDPGQRDSKK-SYSYGWSF
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KE0 YFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSS
       ::::.::::::.:::.:::..:..:.:::: .. ...:. :...:.: ::::..:::  :
NP_006 YFGAFSFIIAEIVGVVAVHIYIEKHQQLRAKSH-SEFLKKSTFARLPPYRYRFRRRS--S
     180       190       200       210        220       230        

              250       260       270       280       290       300
pF1KE0 SRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVH
       :::::: .::: ::.. :::.:.:::.:::.:::::: :   :  .  :::::..::: :
NP_006 SRSTEP-RSRDLSPIS-KGFHTIPSTDISMFTLSRDPSKI--TMGTLLNSDRDHAFLQFH
        240        250        260       270         280       290  

              310       320   
pF1KE0 NCIQKENKDSLHSNTANRRTTPV
       :   :: :.:::.: ::::::::
NP_006 NSTPKEFKESLHNNPANRRTTPV
            300       310     

>>XP_016884020 (OMIM: 602911,614256) PREDICTED: voltage-  (237 aa)
 initn: 1435 init1: 1435 opt: 1435  Z-score: 1624.5  bits: 308.4 E(85289): 9.6e-84
Smith-Waterman score: 1435; 100.0% identity (100.0% similar) in 224 aa overlap (100-323:14-237)

      70        80        90       100       110       120         
pF1KE0 EGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASEFYK
                                     ::::::::::::::::::::::::::::::
XP_016                  MGLNWKNQALGCWAVRASSIFPILSVILLFMGGLCIAASEFYK
                                10        20        30        40   

     130       140       150       160       170       180         
pF1KE0 TRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFII
            50        60        70        80        90       100   

     190       200       210       220       230       240         
pF1KE0 AEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHS
           110       120       130       140       150       160   

     250       260       270       280       290       300         
pF1KE0 RDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKD
           170       180       190       200       210       220   

     310       320   
pF1KE0 SLHSNTANRRTTPV
       ::::::::::::::
XP_016 SLHSNTANRRTTPV
           230       

>>NP_055220 (OMIM: 606404) voltage-dependent calcium cha  (327 aa)
 initn: 971 init1: 551 opt: 1271  Z-score: 1437.8  bits: 274.3 E(85289): 2.4e-73
Smith-Waterman score: 1271; 59.3% identity (85.6% similar) in 327 aa overlap (5-323:5-327)

               10        20        30         40          50       
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRG-VCKTKSVSENE--TSKKNEEV
           :::.::::::.:::::::::.::.:::::::: . .:.  ... ..    .. .  
NP_055 MVRCDRGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTNLTMDDGPPPRRARGD
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE0 MTHSGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFM
       .:::::::.::.:: .:: : .:.::::: ::. :..::.:: :::::.:::::.:::..
NP_055 LTHSGLWRVCCIEGIYKGHCFRINHFPEDNDYDHDSSEYLLRIVRASSVFPILSTILLLL
               70        80        90       100       110       120

       120       130       140       150       160         170     
pF1KE0 GGLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPS--KSDSKKNSYS
       :::::.:...:. ..::.:::::.::.::::::::::::::.:.::::  ....::: :.
NP_055 GGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVYISSNTGDPSDKRDEDKKNHYN
              130       140       150       160       170       180

         180       190       200       210       220          230  
pF1KE0 YGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAIT---RIPSYRYR
       :::::::::::::.:: ::::::...:...:.::  ..  ..:.::. .   :.::::::
NP_055 YGWSFYFGALSFIVAETVGVLAVNIYIEKNKELRFKTK-REFLKASSSSPYARMPSYRYR
              190       200       210        220       230         

            240       250       260       270       280       290  
pF1KE0 YQRRSRSSSRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDR
        .::::::::::: : :::.::.:.:  ...:  :.:::::::.:::..:.  :.:. :.
NP_055 -RRRSRSSSRSTEASPSRDVSPMGLKITGAIPMGELSMYTLSREPLKVTTA--ASYSPDQ
      240       250       260       270       280         290      

            300       310       320   
pF1KE0 DNSFLQVHNCIQKENKDSLHSNTANRRTTPV
       . ::::::. .:.. :...: .  :::::::
NP_055 EASFLQVHDFFQQDLKEGFHVSMLNRRTTPV
        300       310       320       

>>NP_114101 (OMIM: 606900) voltage-dependent calcium cha  (425 aa)
 initn: 1267 init1: 567 opt: 764  Z-score: 865.8  bits: 168.9 E(85289): 1.7e-41
Smith-Waterman score: 1134; 59.1% identity (80.8% similar) in 308 aa overlap (2-281:12-317)

                          10        20        30         40        
pF1KE0           MGLF-DRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRG-VCKTKSVSEN
                  ::. ..:::.:::::::::::.:::::..::::::.:. .:.: ... .
NP_114 MESLKRWNEERGLWCEKGVQVLLTTVGAFAAFGLMTIAISTDYWLYTRALICNTTNLTAG
               10        20        30        40        50        60

                   50        60        70        80        90      
pF1KE0 ------------ETSKKNEEVMTHSGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEY
                    . ::.   .::::::: :::::  .:.: .:.:::::.::. :.:::
NP_114 GDDGTPHRGGGGASEKKDPGGLTHSGLWRICCLEGLKRGVCVKINHFPEDTDYDHDSAEY
               70        80        90       100       110       120

        100       110       120       130       140       150      
pF1KE0 FLRAVRASSIFPILSVILLFMGGLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVY
       .::.:::::::::::.:::..::.:.:::. ::...::::.:::.::.::::::::.:::
NP_114 LLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRNIILGAGILFVAAGLSNIIGVIVY
              130       140       150       160       170       180

        160         170       180       190       200       210    
pF1KE0 ISANAGDPS--KSDSKKNSYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARA
       ::::::.:.  ... ::: ::::::::::.::::.::..:::::...:.: .. .  .: 
NP_114 ISANAGEPGPKRDEEKKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSREAHCQSR-
              190       200       210       220       230          

          220                   230       240       250       260  
pF1KE0 TDYLQA------------SAITRIPSYRYRYQRRSRSSSRSTEPSHSRDASPVGIKGFNT
       .: :.:            ::: :.::::.::.:::::::::.::: :::::: :  :   
NP_114 SDLLKAGGGAGGSGGSGPSAILRLPSYRFRYRRRSRSSSRSSEPSPSRDASPGG-PGGPG
     240       250       260       270       280       290         

            270       280       290       300       310       320  
pF1KE0 LPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKDSLHSNTANRRTTP
       . ::.:::::::::: :..                                         
NP_114 FASTDISMYTLSRDPSKGSVAAGLAGAGGGGGGAVGAFGGAAGGAGGGGGGGGGAGAERD
      300       310       320       330       340       350        

>>NP_665810 (OMIM: 606405) voltage-dependent calcium cha  (275 aa)
 initn: 396 init1: 132 opt: 418  Z-score: 479.9  bits: 96.8 E(85289): 5.4e-20
Smith-Waterman score: 418; 33.2% identity (68.2% similar) in 211 aa overlap (1-205:1-204)

               10        20        30         40        50         
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLY-SRGVCKTKSVSENETSKKNEEVMT
       :.   : .  ::..: :  ...:. :::.::::::  .::     : .:....   ..  
NP_665 MSACGRKALTLLSSVFAVCGLGLLGIAVSTDYWLYLEEGVI----VPQNQSTEI--KMSL
               10        20        30        40            50      

      60        70        80         90       100       110        
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDH-FPEDADYEADTAEYFLRAVRASSIFPILSVILLFMG
       ::::::.: : :. .: :  :.. .: ...  ....   :. .:... ::..:....:.:
NP_665 HSGLWRVCFLAGEERGRCFTIEYVMPMNTQLTSESTVNVLKMIRSATPFPLVSLFFMFIG
           60        70        80        90       100       110    

      120       130       140       150       160       170        
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKN----SY
        .    ...   :  . . .::::. .::: ..:...:::.  .:   . .:      .:
NP_665 FILNNIGHIRPHRTILAFVSGIFFILSGLSLVVGLVLYISS-INDEMLNRTKDAETYFNY
          120       130       140       150        160       170   

          180       190       200       210       220       230    
pF1KE0 SYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQ
       .::::: :.:.::...: .::..:..:. :.                             
NP_665 KYGWSFAFAAISFLLTESAGVMSVYLFMKRYTAEDMYRPHPGFYRPRLSNCSDYSGQFLH
           180       190       200       210       220       230   

          240       250       260       270       280       290    
pF1KE0 RRSRSSSRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDN
                                                                   
NP_665 PDAWVRGRSPSDISSEASLQMNSNYPALLKCPDYDQMSSSPC                  
           240       250       260       270                       

>>XP_016882582 (OMIM: 606899) PREDICTED: voltage-depende  (275 aa)
 initn: 359 init1: 129 opt: 387  Z-score: 445.1  bits: 90.4 E(85289): 4.7e-18
Smith-Waterman score: 387; 30.1% identity (60.5% similar) in 286 aa overlap (6-284:7-274)

                10        20        30        40        50         
pF1KE0  MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMT
             :.. .: .. ::  .. :. :::.::::::   . .   . .:.:..   ..  
XP_016 MSHCSSRALTLLSSVFGA-CGLLLVGIAVSTDYWLY---MEEGTVLPQNQTTEV--KMAL
               10         20        30           40        50      

      60        70        80         90       100       110        
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDHFPE-DADYEADTAEYFLRAVRASSIFPILSVILLFMG
       :.::::.: . :  :: :   ..: : . .  ....: .:..::... ::..:..:.: .
XP_016 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
           60        70        80        90       100       110    

      120       130       140       150       160           170    
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGD----PSKSDSKKNSY
        .    ...   :  . . .::::. .::: ..:...:::.   .    ::.:. .   :
XP_016 FVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSE-QYFHY
          120       130       140       150       160        170   

          180       190       200       210       220       230    
pF1KE0 SYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQ
        ::::: :.: ::.. : .::..:..:  :.      :.   :    :.     :: : .
XP_016 RYGWSFAFAASSFLLKEGAGVMSVYLFTKRY------AEEEMYRPHPAF-----YRPRLS
           180       190       200             210            220  

          240        250       260       270        280       290  
pF1KE0 RRSRSSSRSTEP-SHSRDASPVGIKGFNTLPSTEISMYTLSR-DPLKAATTPTATYNSDR
         :  :..  .: .  :  ::  :..  ..  :.    ...  : :. .:.:        
XP_016 DCSDYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC       
            230       240       250       260       270            

            300       310       320   
pF1KE0 DNSFLQVHNCIQKENKDSLHSNTANRRTTPV

>>NP_114102 (OMIM: 606899) voltage-dependent calcium cha  (275 aa)
 initn: 359 init1: 129 opt: 387  Z-score: 445.1  bits: 90.4 E(85289): 4.7e-18
Smith-Waterman score: 387; 30.1% identity (60.5% similar) in 286 aa overlap (6-284:7-274)

                10        20        30        40        50         
pF1KE0  MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMT
             :.. .: .. ::  .. :. :::.::::::   . .   . .:.:..   ..  
NP_114 MSHCSSRALTLLSSVFGA-CGLLLVGIAVSTDYWLY---MEEGTVLPQNQTTEV--KMAL
               10         20        30           40        50      

      60        70        80         90       100       110        
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDHFPE-DADYEADTAEYFLRAVRASSIFPILSVILLFMG
       :.::::.: . :  :: :   ..: : . .  ....: .:..::... ::..:..:.: .
NP_114 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
           60        70        80        90       100       110    

      120       130       140       150       160           170    
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGD----PSKSDSKKNSY
        .    ...   :  . . .::::. .::: ..:...:::.   .    ::.:. .   :
NP_114 FVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSE-QYFHY
          120       130       140       150       160        170   

          180       190       200       210       220       230    
pF1KE0 SYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQ
        ::::: :.: ::.. : .::..:..:  :.      :.   :    :.     :: : .
NP_114 RYGWSFAFAASSFLLKEGAGVMSVYLFTKRY------AEEEMYRPHPAF-----YRPRLS
           180       190       200             210            220  

          240        250       260       270        280       290  
pF1KE0 RRSRSSSRSTEP-SHSRDASPVGIKGFNTLPSTEISMYTLSR-DPLKAATTPTATYNSDR
         :  :..  .: .  :  ::  :..  ..  :.    ...  : :. .:.:        
NP_114 DCSDYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC       
            230       240       250       260       270            

            300       310       320   
pF1KE0 DNSFLQVHNCIQKENKDSLHSNTANRRTTPV

>>XP_005259181 (OMIM: 606899) PREDICTED: voltage-depende  (305 aa)
 initn: 204 init1:  81 opt: 235  Z-score: 273.4  bits: 58.8 E(85289): 1.7e-08
Smith-Waterman score: 235; 28.5% identity (63.3% similar) in 158 aa overlap (6-162:7-158)

                10        20        30        40        50         
pF1KE0  MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMT
             :.. .: .. ::  .. :. :::.::::::   . .   . .:.:..   ..  
XP_005 MSHCSSRALTLLSSVFGA-CGLLLVGIAVSTDYWLY---MEEGTVLPQNQTTEV--KMAL
               10         20        30           40        50      

      60        70        80         90       100       110        
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDHFPE-DADYEADTAEYFLRAVRASSIFPILSVILLFMG
       :.::::.: . :  :: :   ..: : . .  ....: .:..::... ::..:..:.: .
XP_005 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
           60        70        80        90       100       110    

      120       130       140       150       160       170        
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGW
        .    ...   :  . . .::::. .:    . . :. .  .:                
XP_005 FVISNIGHIRPQRTILAFVSGIFFILSGGRRDVRVPVHQALRGGGDVPSTPGLLPPASQR
          120       130       140       150       160       170    

      180       190       200       210       220       230        
pF1KE0 SFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSR
                                                                   
XP_005 LLRLLGPVPAARGVAPRPEPLRHLQRRVHPNDAELPSRHQVPGPPAHLHLALLRPAPRSS
          180       190       200       210       220       230    

>>NP_001139808 (OMIM: 611579) transmembrane protein 114   (223 aa)
 initn: 217 init1:  74 opt: 205  Z-score: 241.9  bits: 52.5 E(85289): 9.7e-07
Smith-Waterman score: 205; 26.9% identity (57.2% similar) in 208 aa overlap (16-209:16-216)

               10        20        30          40        50        
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYW--LYSRGVCKTKSVSENETSKKN----
                      ::.. : :.. :.:::.:  . .. . .:   ...  .. :    
NP_001 MRVHLGGLAGAAALTGALS-FVLLAAAIGTDFWYIIDTERLERTGPGAQDLLGSINRSQP
               10         20        30        40        50         

           60        70        80        90       100       110    
pF1KE0 EEVMTHSGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVIL
       : . .:::::::: ...    :   .. :  .    ..... .:    .  :.  ::.::
NP_001 EPLSSHSGLWRTCRVQSPCTPL---MNPFRLENVTVSESSRQLLTMHGTFVILLPLSLIL
      60        70        80           90       100       110      

          120       130       140       150       160              
pF1KE0 LFMGGLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGD--------PSK
       . .::.    : :    . ..: .::.:. ... .. :: :::. .:.           :
NP_001 MVFGGMTGFLS-FLLQAYLLLLLTGILFLFGAMVTLAGISVYIAYSAAAFREALCLLEEK
        120        130       140       150       160       170     

        170       180       190       200       210       220      
pF1KE0 SDSKKNSYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRI
       .   . . :.:::. .: .:::   ..:  :. .   :. .::                 
NP_001 ALLDQVDISFGWSLALGWISFIAELLTG--AAFLAAARELSLRRRQDQAI          
         180       190       200         210       220             

        230       240       250       260       270       280      
pF1KE0 PSYRYRYQRRSRSSSRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTA




323 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 04:36:29 2016 done: Thu Nov  3 04:36:30 2016
 Total Scan time:  7.270 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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