Result of FASTA (omim) for
pF1KE0491
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0491, 323 aa
1>>>pF1KE0491 323 - 323 aa - 323 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3546+/-0.000418; mu= 10.0948+/- 0.026
mean_var=79.1045+/-15.999, 0's: 0 Z-trim(111.1): 56 B-trim: 0 in 0/54
Lambda= 0.144203
statistics sampled from 19619 (19663) to 19619 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.231), width: 16
Scan time: 7.270
The best scores are: opt bits E(85289)
NP_006069 (OMIM: 602911,614256) voltage-dependent ( 323) 2109 448.6 7.9e-126
NP_006530 (OMIM: 606403) voltage-dependent calcium ( 315) 1592 341.1 1.8e-93
XP_016884020 (OMIM: 602911,614256) PREDICTED: volt ( 237) 1435 308.4 9.6e-84
NP_055220 (OMIM: 606404) voltage-dependent calcium ( 327) 1271 274.3 2.4e-73
NP_114101 (OMIM: 606900) voltage-dependent calcium ( 425) 764 168.9 1.7e-41
NP_665810 (OMIM: 606405) voltage-dependent calcium ( 275) 418 96.8 5.4e-20
XP_016882582 (OMIM: 606899) PREDICTED: voltage-dep ( 275) 387 90.4 4.7e-18
NP_114102 (OMIM: 606899) voltage-dependent calcium ( 275) 387 90.4 4.7e-18
XP_005259181 (OMIM: 606899) PREDICTED: voltage-dep ( 305) 235 58.8 1.7e-08
NP_001139808 (OMIM: 611579) transmembrane protein ( 223) 205 52.5 9.7e-07
>>NP_006069 (OMIM: 602911,614256) voltage-dependent calc (323 aa)
initn: 2109 init1: 2109 opt: 2109 Z-score: 2380.1 bits: 448.6 E(85289): 7.9e-126
Smith-Waterman score: 2109; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323)
10 20 30 40 50 60
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 YFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVH
250 260 270 280 290 300
310 320
pF1KE0 NCIQKENKDSLHSNTANRRTTPV
:::::::::::::::::::::::
NP_006 NCIQKENKDSLHSNTANRRTTPV
310 320
>>NP_006530 (OMIM: 606403) voltage-dependent calcium cha (315 aa)
initn: 1322 init1: 1002 opt: 1592 Z-score: 1798.9 bits: 341.1 E(85289): 1.8e-93
Smith-Waterman score: 1592; 74.6% identity (90.7% similar) in 323 aa overlap (1-323:1-315)
10 20 30 40 50 60
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMTH
: . :::.:::.::::::::::::::::::::::::::::.:::.:.::::.::::::::
NP_006 MRMCDRGIQMLITTVGAFAAFSLMTIAVGTDYWLYSRGVCRTKSTSDNETSRKNEEVMTH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGL
::::::::::: :.:.::.::::::::::: :::::.::::::::.:::::: :::.:::
NP_006 SGLWRTCCLEGAFRGVCKKIDHFPEDADYEQDTAEYLLRAVRASSVFPILSVTLLFFGGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSF
:.:::::...:::.::::::::::::::::::::::::::::::.. :::: ::::::::
NP_006 CVAASEFHRSRHNVILSAGIFFVSAGLSNIIGIIVYISANAGDPGQRDSKK-SYSYGWSF
130 140 150 160 170
190 200 210 220 230 240
pF1KE0 YFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSS
::::.::::::.:::.:::..:..:.:::: .. ...:. :...:.: ::::..::: :
NP_006 YFGAFSFIIAEIVGVVAVHIYIEKHQQLRAKSH-SEFLKKSTFARLPPYRYRFRRRS--S
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 SRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVH
:::::: .::: ::.. :::.:.:::.:::.:::::: : : . :::::..::: :
NP_006 SRSTEP-RSRDLSPIS-KGFHTIPSTDISMFTLSRDPSKI--TMGTLLNSDRDHAFLQFH
240 250 260 270 280 290
310 320
pF1KE0 NCIQKENKDSLHSNTANRRTTPV
: :: :.:::.: ::::::::
NP_006 NSTPKEFKESLHNNPANRRTTPV
300 310
>>XP_016884020 (OMIM: 602911,614256) PREDICTED: voltage- (237 aa)
initn: 1435 init1: 1435 opt: 1435 Z-score: 1624.5 bits: 308.4 E(85289): 9.6e-84
Smith-Waterman score: 1435; 100.0% identity (100.0% similar) in 224 aa overlap (100-323:14-237)
70 80 90 100 110 120
pF1KE0 EGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFMGGLCIAASEFYK
::::::::::::::::::::::::::::::
XP_016 MGLNWKNQALGCWAVRASSIFPILSVILLFMGGLCIAASEFYK
10 20 30 40
130 140 150 160 170 180
pF1KE0 TRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGWSFYFGALSFII
50 60 70 80 90 100
190 200 210 220 230 240
pF1KE0 AEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEPSHS
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE0 RDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKD
170 180 190 200 210 220
310 320
pF1KE0 SLHSNTANRRTTPV
::::::::::::::
XP_016 SLHSNTANRRTTPV
230
>>NP_055220 (OMIM: 606404) voltage-dependent calcium cha (327 aa)
initn: 971 init1: 551 opt: 1271 Z-score: 1437.8 bits: 274.3 E(85289): 2.4e-73
Smith-Waterman score: 1271; 59.3% identity (85.6% similar) in 327 aa overlap (5-323:5-327)
10 20 30 40 50
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRG-VCKTKSVSENE--TSKKNEEV
:::.::::::.:::::::::.::.:::::::: . .:. ... .. .. .
NP_055 MVRCDRGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTNLTMDDGPPPRRARGD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 MTHSGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVILLFM
.:::::::.::.:: .:: : .:.::::: ::. :..::.:: :::::.:::::.:::..
NP_055 LTHSGLWRVCCIEGIYKGHCFRINHFPEDNDYDHDSSEYLLRIVRASSVFPILSTILLLL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GGLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPS--KSDSKKNSYS
:::::.:...:. ..::.:::::.::.::::::::::::::.:.:::: ....::: :.
NP_055 GGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVYISSNTGDPSDKRDEDKKNHYN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 YGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAIT---RIPSYRYR
:::::::::::::.:: ::::::...:...:.:: .. ..:.::. . :.::::::
NP_055 YGWSFYFGALSFIVAETVGVLAVNIYIEKNKELRFKTK-REFLKASSSSPYARMPSYRYR
190 200 210 220 230
240 250 260 270 280 290
pF1KE0 YQRRSRSSSRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDR
.::::::::::: : :::.::.:.: ...: :.:::::::.:::..:. :.:. :.
NP_055 -RRRSRSSSRSTEASPSRDVSPMGLKITGAIPMGELSMYTLSREPLKVTTA--ASYSPDQ
240 250 260 270 280 290
300 310 320
pF1KE0 DNSFLQVHNCIQKENKDSLHSNTANRRTTPV
. ::::::. .:.. :...: . :::::::
NP_055 EASFLQVHDFFQQDLKEGFHVSMLNRRTTPV
300 310 320
>>NP_114101 (OMIM: 606900) voltage-dependent calcium cha (425 aa)
initn: 1267 init1: 567 opt: 764 Z-score: 865.8 bits: 168.9 E(85289): 1.7e-41
Smith-Waterman score: 1134; 59.1% identity (80.8% similar) in 308 aa overlap (2-281:12-317)
10 20 30 40
pF1KE0 MGLF-DRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRG-VCKTKSVSEN
::. ..:::.:::::::::::.:::::..::::::.:. .:.: ... .
NP_114 MESLKRWNEERGLWCEKGVQVLLTTVGAFAAFGLMTIAISTDYWLYTRALICNTTNLTAG
10 20 30 40 50 60
50 60 70 80 90
pF1KE0 ------------ETSKKNEEVMTHSGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEY
. ::. .::::::: ::::: .:.: .:.:::::.::. :.:::
NP_114 GDDGTPHRGGGGASEKKDPGGLTHSGLWRICCLEGLKRGVCVKINHFPEDTDYDHDSAEY
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 FLRAVRASSIFPILSVILLFMGGLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVY
.::.:::::::::::.:::..::.:.:::. ::...::::.:::.::.::::::::.:::
NP_114 LLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRNIILGAGILFVAAGLSNIIGVIVY
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE0 ISANAGDPS--KSDSKKNSYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARA
::::::.:. ... ::: ::::::::::.::::.::..:::::...:.: .. . .:
NP_114 ISANAGEPGPKRDEEKKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSREAHCQSR-
190 200 210 220 230
220 230 240 250 260
pF1KE0 TDYLQA------------SAITRIPSYRYRYQRRSRSSSRSTEPSHSRDASPVGIKGFNT
.: :.: ::: :.::::.::.:::::::::.::: :::::: : :
NP_114 SDLLKAGGGAGGSGGSGPSAILRLPSYRFRYRRRSRSSSRSSEPSPSRDASPGG-PGGPG
240 250 260 270 280 290
270 280 290 300 310 320
pF1KE0 LPSTEISMYTLSRDPLKAATTPTATYNSDRDNSFLQVHNCIQKENKDSLHSNTANRRTTP
. ::.:::::::::: :..
NP_114 FASTDISMYTLSRDPSKGSVAAGLAGAGGGGGGAVGAFGGAAGGAGGGGGGGGGAGAERD
300 310 320 330 340 350
>>NP_665810 (OMIM: 606405) voltage-dependent calcium cha (275 aa)
initn: 396 init1: 132 opt: 418 Z-score: 479.9 bits: 96.8 E(85289): 5.4e-20
Smith-Waterman score: 418; 33.2% identity (68.2% similar) in 211 aa overlap (1-205:1-204)
10 20 30 40 50
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLY-SRGVCKTKSVSENETSKKNEEVMT
:. : . ::..: : ...:. :::.:::::: .:: : .:.... ..
NP_665 MSACGRKALTLLSSVFAVCGLGLLGIAVSTDYWLYLEEGVI----VPQNQSTEI--KMSL
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDH-FPEDADYEADTAEYFLRAVRASSIFPILSVILLFMG
::::::.: : :. .: : :.. .: ... .... :. .:... ::..:....:.:
NP_665 HSGLWRVCFLAGEERGRCFTIEYVMPMNTQLTSESTVNVLKMIRSATPFPLVSLFFMFIG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKN----SY
. ... : . . .::::. .::: ..:...:::. .: . .: .:
NP_665 FILNNIGHIRPHRTILAFVSGIFFILSGLSLVVGLVLYISS-INDEMLNRTKDAETYFNY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQ
.::::: :.:.::...: .::..:..:. :.
NP_665 KYGWSFAFAAISFLLTESAGVMSVYLFMKRYTAEDMYRPHPGFYRPRLSNCSDYSGQFLH
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 RRSRSSSRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTATYNSDRDN
NP_665 PDAWVRGRSPSDISSEASLQMNSNYPALLKCPDYDQMSSSPC
240 250 260 270
>>XP_016882582 (OMIM: 606899) PREDICTED: voltage-depende (275 aa)
initn: 359 init1: 129 opt: 387 Z-score: 445.1 bits: 90.4 E(85289): 4.7e-18
Smith-Waterman score: 387; 30.1% identity (60.5% similar) in 286 aa overlap (6-284:7-274)
10 20 30 40 50
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMT
:.. .: .. :: .. :. :::.:::::: . . . .:.:.. ..
XP_016 MSHCSSRALTLLSSVFGA-CGLLLVGIAVSTDYWLY---MEEGTVLPQNQTTEV--KMAL
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDHFPE-DADYEADTAEYFLRAVRASSIFPILSVILLFMG
:.::::.: . : :: : ..: : . . ....: .:..::... ::..:..:.: .
XP_016 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGD----PSKSDSKKNSY
. ... : . . .::::. .::: ..:...:::. . ::.:. . :
XP_016 FVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSE-QYFHY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQ
::::: :.: ::.. : .::..:..: :. :. : :. :: : .
XP_016 RYGWSFAFAASSFLLKEGAGVMSVYLFTKRY------AEEEMYRPHPAF-----YRPRLS
180 190 200 210 220
240 250 260 270 280 290
pF1KE0 RRSRSSSRSTEP-SHSRDASPVGIKGFNTLPSTEISMYTLSR-DPLKAATTPTATYNSDR
: :.. .: . : :: :.. .. :. ... : :. .:.:
XP_016 DCSDYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
230 240 250 260 270
300 310 320
pF1KE0 DNSFLQVHNCIQKENKDSLHSNTANRRTTPV
>>NP_114102 (OMIM: 606899) voltage-dependent calcium cha (275 aa)
initn: 359 init1: 129 opt: 387 Z-score: 445.1 bits: 90.4 E(85289): 4.7e-18
Smith-Waterman score: 387; 30.1% identity (60.5% similar) in 286 aa overlap (6-284:7-274)
10 20 30 40 50
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMT
:.. .: .. :: .. :. :::.:::::: . . . .:.:.. ..
NP_114 MSHCSSRALTLLSSVFGA-CGLLLVGIAVSTDYWLY---MEEGTVLPQNQTTEV--KMAL
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDHFPE-DADYEADTAEYFLRAVRASSIFPILSVILLFMG
:.::::.: . : :: : ..: : . . ....: .:..::... ::..:..:.: .
NP_114 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGD----PSKSDSKKNSY
. ... : . . .::::. .::: ..:...:::. . ::.:. . :
NP_114 FVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSE-QYFHY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQ
::::: :.: ::.. : .::..:..: :. :. : :. :: : .
NP_114 RYGWSFAFAASSFLLKEGAGVMSVYLFTKRY------AEEEMYRPHPAF-----YRPRLS
180 190 200 210 220
240 250 260 270 280 290
pF1KE0 RRSRSSSRSTEP-SHSRDASPVGIKGFNTLPSTEISMYTLSR-DPLKAATTPTATYNSDR
: :.. .: . : :: :.. .. :. ... : :. .:.:
NP_114 DCSDYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
230 240 250 260 270
300 310 320
pF1KE0 DNSFLQVHNCIQKENKDSLHSNTANRRTTPV
>>XP_005259181 (OMIM: 606899) PREDICTED: voltage-depende (305 aa)
initn: 204 init1: 81 opt: 235 Z-score: 273.4 bits: 58.8 E(85289): 1.7e-08
Smith-Waterman score: 235; 28.5% identity (63.3% similar) in 158 aa overlap (6-162:7-158)
10 20 30 40 50
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMT
:.. .: .. :: .. :. :::.:::::: . . . .:.:.. ..
XP_005 MSHCSSRALTLLSSVFGA-CGLLLVGIAVSTDYWLY---MEEGTVLPQNQTTEV--KMAL
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 HSGLWRTCCLEGNFKGLCKQIDHFPE-DADYEADTAEYFLRAVRASSIFPILSVILLFMG
:.::::.: . : :: : ..: : . . ....: .:..::... ::..:..:.: .
XP_005 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGDPSKSDSKKNSYSYGW
. ... : . . .::::. .: . . :. . .:
XP_005 FVISNIGHIRPQRTILAFVSGIFFILSGGRRDVRVPVHQALRGGGDVPSTPGLLPPASQR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 SFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSR
XP_005 LLRLLGPVPAARGVAPRPEPLRHLQRRVHPNDAELPSRHQVPGPPAHLHLALLRPAPRSS
180 190 200 210 220 230
>>NP_001139808 (OMIM: 611579) transmembrane protein 114 (223 aa)
initn: 217 init1: 74 opt: 205 Z-score: 241.9 bits: 52.5 E(85289): 9.7e-07
Smith-Waterman score: 205; 26.9% identity (57.2% similar) in 208 aa overlap (16-209:16-216)
10 20 30 40 50
pF1KE0 MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYW--LYSRGVCKTKSVSENETSKKN----
::.. : :.. :.:::.: . .. . .: ... .. :
NP_001 MRVHLGGLAGAAALTGALS-FVLLAAAIGTDFWYIIDTERLERTGPGAQDLLGSINRSQP
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 EEVMTHSGLWRTCCLEGNFKGLCKQIDHFPEDADYEADTAEYFLRAVRASSIFPILSVIL
: . .:::::::: ... : .. : . ..... .: . :. ::.::
NP_001 EPLSSHSGLWRTCRVQSPCTPL---MNPFRLENVTVSESSRQLLTMHGTFVILLPLSLIL
60 70 80 90 100 110
120 130 140 150 160
pF1KE0 LFMGGLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGD--------PSK
. .::. : : . ..: .::.:. ... .. :: :::. .:. :
NP_001 MVFGGMTGFLS-FLLQAYLLLLLTGILFLFGAMVTLAGISVYIAYSAAAFREALCLLEEK
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 SDSKKNSYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRI
. . . :.:::. .: .::: ..: :. . :. .::
NP_001 ALLDQVDISFGWSLALGWISFIAELLTG--AAFLAAARELSLRRRQDQAI
180 190 200 210 220
230 240 250 260 270 280
pF1KE0 PSYRYRYQRRSRSSSRSTEPSHSRDASPVGIKGFNTLPSTEISMYTLSRDPLKAATTPTA
323 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:36:29 2016 done: Thu Nov 3 04:36:30 2016
Total Scan time: 7.270 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]