Result of FASTA (omim) for
pF1KE0531
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0531, 411 aa
1>>>pF1KE0531 411 - 411 aa - 411 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9405+/-0.000385; mu= 18.8867+/- 0.024
mean_var=61.6467+/-12.345, 0's: 0 Z-trim(112.1): 18 B-trim: 211 in 1/51
Lambda= 0.163350
statistics sampled from 20869 (20875) to 20869 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.245), width: 16
Scan time: 7.960
The best scores are: opt bits E(85289)
XP_005261672 (OMIM: 104170,609241,609242) PREDICTE ( 411) 2872 685.6 5.9e-197
XP_005261673 (OMIM: 104170,609241,609242) PREDICTE ( 411) 2872 685.6 5.9e-197
NP_000253 (OMIM: 104170,609241,609242) alpha-N-ace ( 411) 2872 685.6 5.9e-197
NP_000160 (OMIM: 300644,301500) alpha-galactosidas ( 429) 1282 310.9 3.9e-84
>>XP_005261672 (OMIM: 104170,609241,609242) PREDICTED: a (411 aa)
initn: 2872 init1: 2872 opt: 2872 Z-score: 3656.9 bits: 685.6 E(85289): 5.9e-197
Smith-Waterman score: 2872; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KE0 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
370 380 390 400 410
>>XP_005261673 (OMIM: 104170,609241,609242) PREDICTED: a (411 aa)
initn: 2872 init1: 2872 opt: 2872 Z-score: 3656.9 bits: 685.6 E(85289): 5.9e-197
Smith-Waterman score: 2872; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KE0 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
370 380 390 400 410
>>NP_000253 (OMIM: 104170,609241,609242) alpha-N-acetylg (411 aa)
initn: 2872 init1: 2872 opt: 2872 Z-score: 3656.9 bits: 685.6 E(85289): 5.9e-197
Smith-Waterman score: 2872; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)
10 20 30 40 50 60
pF1KE0 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
310 320 330 340 350 360
370 380 390 400 410
pF1KE0 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
370 380 390 400 410
>>NP_000160 (OMIM: 300644,301500) alpha-galactosidase A (429 aa)
initn: 1102 init1: 774 opt: 1282 Z-score: 1631.6 bits: 310.9 E(85289): 3.9e-84
Smith-Waterman score: 1282; 49.9% identity (72.9% similar) in 399 aa overlap (18-409:32-424)
10 20 30 40
pF1KE0 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPK
::::: .:: :::: :::: ::..:.:.:
NP_000 QLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPD
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 NCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGG-RDASGRLMPDPKRFPHGIPFLA
.::::.::::::. :...::.: :: :: :::::.. ::. :::. ::.:::::: ::
NP_000 SCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLA
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 DYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCF-STPEER
.:::: :::::::::.:: :: :.::. . ::::::.: ::.::.:::. .. :.
NP_000 NYVHSKGLKLGIYADVGNKTCAGFPGS-FGYYDIDAQTFADWGVDLLKFDGCYCDSLENL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 AQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSV
:.:: .:. ::: ::: :..:: :: : . . ::. . . :: :::. ::.::: :.
NP_000 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQ-KPNYTEIRQYCNHWRNFADIDDSWKSI
190 200 210 220 230
230 240 250 260 270 280
pF1KE0 LSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTD
:::.: .:. . ::::: :::::::.::::::: .:. .:::::...::::.::.:
NP_000 KSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSND
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE0 LRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRT
:: :: : .::. .: ::::::: :: .... .. ::. ::::. : :..... :
NP_000 LRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNF-EVWERPLSGLAWAVAMIN-RQ
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE0 DM--PYRYH---SSLGQLNFTGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYL
.. : : .:::. . . . .: . .. . . . :::.:.:. :
NP_000 EIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQL
360 370 380 390 400 410
410
pF1KE0 YPIKNLEMSQQ
....::
NP_000 E--NTMQMSLKDLL
420
411 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 01:26:01 2016 done: Thu Nov 3 01:26:02 2016
Total Scan time: 7.960 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]