Result of FASTA (omim) for
pF1KE0542
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0542, 307 aa
1>>>pF1KE0542 307 - 307 aa - 307 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8846+/-0.000525; mu= 17.6917+/- 0.032
mean_var=64.4002+/-14.047, 0's: 0 Z-trim(107.1): 268 B-trim: 602 in 1/49
Lambda= 0.159820
statistics sampled from 14905 (15203) to 14905 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.526), E-opt: 0.2 (0.178), width: 16
Scan time: 5.540
The best scores are: opt bits E(85289)
NP_006349 (OMIM: 606795) peroxisomal membrane prot ( 307) 1967 462.8 3.7e-130
NP_001269655 (OMIM: 606795) peroxisomal membrane p ( 270) 1737 409.8 3.1e-114
NP_001269656 (OMIM: 606795) peroxisomal membrane p ( 234) 1249 297.2 2.1e-80
NP_110407 (OMIM: 610815,616839) mitochondrial fola ( 315) 382 97.4 3.9e-20
XP_011523400 (OMIM: 606521,607196,613710) PREDICTE ( 215) 283 74.5 2.2e-13
XP_016880417 (OMIM: 606521,607196,613710) PREDICTE ( 215) 283 74.5 2.2e-13
NP_001034444 (OMIM: 615064) mitochondrial basic am ( 303) 272 72.0 1.6e-12
XP_005263263 (OMIM: 113730,601665) PREDICTED: mito ( 306) 272 72.0 1.7e-12
XP_016869366 (OMIM: 610815,616839) PREDICTED: mito ( 183) 268 70.9 2.1e-12
NP_068605 (OMIM: 113730,601665) mitochondrial brow ( 307) 270 71.6 2.3e-12
NP_003347 (OMIM: 601665,602044) mitochondrial unco ( 312) 268 71.1 3.2e-12
XP_005257618 (OMIM: 606521,607196,613710) PREDICTE ( 320) 264 70.2 6.2e-12
XP_005257617 (OMIM: 606521,607196,613710) PREDICTE ( 320) 264 70.2 6.2e-12
XP_006722070 (OMIM: 606521,607196,613710) PREDICTE ( 320) 264 70.2 6.2e-12
XP_016880415 (OMIM: 606521,607196,613710) PREDICTE ( 320) 264 70.2 6.2e-12
NP_001119593 (OMIM: 606521,607196,613710) mitochon ( 320) 264 70.2 6.2e-12
XP_005257616 (OMIM: 606521,607196,613710) PREDICTE ( 320) 264 70.2 6.2e-12
XP_005257619 (OMIM: 606521,607196,613710) PREDICTE ( 320) 264 70.2 6.2e-12
NP_068380 (OMIM: 606521,607196,613710) mitochondri ( 320) 264 70.2 6.2e-12
NP_001119594 (OMIM: 606521,607196,613710) mitochon ( 320) 264 70.2 6.2e-12
NP_001164641 (OMIM: 607571) mitochondrial 2-oxodic ( 298) 251 67.2 4.7e-11
NP_085134 (OMIM: 607571) mitochondrial 2-oxodicarb ( 299) 251 67.2 4.7e-11
NP_660348 (OMIM: 300641) solute carrier family 25 ( 341) 249 66.8 7.1e-11
XP_011530530 (OMIM: 113730,601665) PREDICTED: mito ( 277) 247 66.2 8.4e-11
XP_011543249 (OMIM: 610825) PREDICTED: solute carr ( 246) 241 64.8 2e-10
XP_016873051 (OMIM: 610825) PREDICTED: solute carr ( 260) 241 64.8 2.1e-10
XP_011535589 (OMIM: 607571) PREDICTED: mitochondri ( 303) 237 64.0 4.4e-10
XP_011535590 (OMIM: 607571) PREDICTED: mitochondri ( 269) 231 62.5 1.1e-09
XP_005266379 (OMIM: 610793) PREDICTED: kidney mito ( 254) 227 61.6 1.9e-09
XP_016876013 (OMIM: 610793) PREDICTED: kidney mito ( 291) 227 61.6 2.1e-09
NP_001010875 (OMIM: 610793) kidney mitochondrial c ( 291) 227 61.6 2.1e-09
XP_005266378 (OMIM: 610793) PREDICTED: kidney mito ( 293) 227 61.6 2.1e-09
XP_006719856 (OMIM: 610793) PREDICTED: kidney mito ( 293) 227 61.6 2.1e-09
XP_016876012 (OMIM: 610793) PREDICTED: kidney mito ( 293) 227 61.6 2.1e-09
XP_006719857 (OMIM: 610793) PREDICTED: kidney mito ( 293) 227 61.6 2.1e-09
NP_073714 (OMIM: 601665,602044) mitochondrial unco ( 275) 225 61.2 2.8e-09
NP_000378 (OMIM: 212138,613698) mitochondrial carn ( 301) 225 61.2 3e-09
XP_016880416 (OMIM: 606521,607196,613710) PREDICTE ( 219) 219 59.7 6.1e-09
NP_001158268 (OMIM: 611037,616794) S-adenosylmethi ( 186) 217 59.2 7.4e-09
XP_011531629 (OMIM: 611037,616794) PREDICTED: S-ad ( 186) 217 59.2 7.4e-09
NP_003553 (OMIM: 604165) mitochondrial 2-oxoglutar ( 314) 219 59.8 8.1e-09
NP_775742 (OMIM: 611037,616794) S-adenosylmethioni ( 274) 217 59.3 1e-08
NP_001158889 (OMIM: 604165) mitochondrial 2-oxoglu ( 303) 217 59.3 1.1e-08
NP_077008 (OMIM: 608746) calcium-binding mitochond ( 468) 215 59.0 2.1e-08
XP_011526586 (OMIM: 608746) PREDICTED: calcium-bin ( 469) 215 59.0 2.1e-08
XP_016882777 (OMIM: 608746) PREDICTED: calcium-bin ( 484) 215 59.0 2.1e-08
XP_011526585 (OMIM: 608746) PREDICTED: calcium-bin ( 490) 215 59.0 2.2e-08
XP_011526584 (OMIM: 608746) PREDICTED: calcium-bin ( 503) 215 59.0 2.2e-08
XP_011526583 (OMIM: 608746) PREDICTED: calcium-bin ( 515) 215 59.1 2.3e-08
XP_011526582 (OMIM: 608746) PREDICTED: calcium-bin ( 531) 215 59.1 2.3e-08
>>NP_006349 (OMIM: 606795) peroxisomal membrane protein (307 aa)
initn: 1967 init1: 1967 opt: 1967 Z-score: 2457.6 bits: 462.8 E(85289): 3.7e-130
Smith-Waterman score: 1967; 100.0% identity (100.0% similar) in 307 aa overlap (1-307:1-307)
10 20 30 40 50 60
pF1KE0 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 PLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 IQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMG
250 260 270 280 290 300
pF1KE0 LKRAHQH
:::::::
NP_006 LKRAHQH
>>NP_001269655 (OMIM: 606795) peroxisomal membrane prote (270 aa)
initn: 1737 init1: 1737 opt: 1737 Z-score: 2171.8 bits: 409.8 E(85289): 3.1e-114
Smith-Waterman score: 1737; 99.6% identity (100.0% similar) in 269 aa overlap (39-307:2-270)
10 20 30 40 50 60
pF1KE0 SLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEGLLAPYRGW
.:::::::::::::::::::::::::::::
NP_001 MIDEKRKSKTTHMVLLEIIKEEGLLAPYRGW
10 20 30
70 80 90 100 110 120
pF1KE0 FPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTR
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 LKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 LKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLR
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 NILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH
220 230 240 250 260 270
>>NP_001269656 (OMIM: 606795) peroxisomal membrane prote (234 aa)
initn: 1464 init1: 1249 opt: 1249 Z-score: 1564.6 bits: 297.2 E(85289): 2.1e-80
Smith-Waterman score: 1322; 76.2% identity (76.2% similar) in 307 aa overlap (1-307:1-234)
10 20 30 40 50 60
pF1KE0 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEG
::::::::::::::::::::::::::::::::::::::
NP_001 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQ----------------------
10 20 30
70 80 90 100 110 120
pF1KE0 LLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTT
:::::::::
NP_001 ---------------------------------------------------GVVNVLLTT
40
130 140 150 160 170 180
pF1KE0 PLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPA
50 60 70 80 90 100
190 200 210 220 230 240
pF1KE0 IQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQFMFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPE
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE0 NRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMG
170 180 190 200 210 220
pF1KE0 LKRAHQH
:::::::
NP_001 LKRAHQH
230
>>NP_110407 (OMIM: 610815,616839) mitochondrial folate t (315 aa)
initn: 283 init1: 119 opt: 382 Z-score: 482.4 bits: 97.4 E(85289): 3.9e-20
Smith-Waterman score: 382; 29.3% identity (62.6% similar) in 297 aa overlap (7-292:23-304)
10 20 30 40
pF1KE0 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDE---
::.:. ::. :.: . .. ::: ...:. :..
NP_110 MTGQGQSASGSSAWSTVFRHVRYENLI---AGVSGGVLSNLALHPLDLVKIRFAVSDGLE
10 20 30 40 50
50 60 70 80 90
pF1KE0 -KRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKG--QH
. : . : : : .:: . :.: : : . : .::. .:..:. ..: ..
NP_110 LRPKYNGILHCLTTIWKLDGLRGLYQGVTPNIWGAGLSWGLYFFFYNAIKSYKTEGRAER
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE0 STTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIR
. . :: . ::.... .:.::::..::: :: : .:::..:.. .: .
NP_110 LEATEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYDAVVNSP--HRQYKGMFDTLVKIYK
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE0 DEGISALWNGTFPSLLLVFNPAIQFMFYEGLK---RQLLKK--RMKLSSLDVFIIGAVAK
::. .:..: :.:. . . :.::: :: :: : ... . .::... . ..:..:
NP_110 YEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLSTVEYISVAALSK
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE0 AIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAK
.:...::: :.: : ::. .. .. .. .. . :. :. :.:::. .
NP_110 IFAVAATYPYQVV-------RARLQDQHMFYSG---VIDVITKTWRKEGVGGFYKGIAPN
240 250 260 270 280
280 290 300
pF1KE0 LLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH
:.... . . :.:::...
NP_110 LIRVTPACCITFVVYENVSHFLLDLREKRK
290 300 310
>>XP_011523400 (OMIM: 606521,607196,613710) PREDICTED: m (215 aa)
initn: 235 init1: 94 opt: 283 Z-score: 361.4 bits: 74.5 E(85289): 2.2e-13
Smith-Waterman score: 283; 28.8% identity (68.2% similar) in 198 aa overlap (96-289:10-199)
70 80 90 100 110 120
pF1KE0 RGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVV
:...: . :.: :.:.:. : .:. :.
XP_011 MVGYDPKPDGRNNTKFQVAVAGSVSGLVTRALISPFDVI
10 20 30
130 140 150 160 170 180
pF1KE0 NTRLKLQGAKFRNEDIVPT-NYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFN-PAIQF
. :..:: .. : :. .:.::..: .::...:: .:.:.: :. .: .. :.::
XP_011 KIRFQLQHERLSRSD--PSAKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQF
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE0 MFYEGLKRQLLKKRM-KLSSLDV-FIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPEN
. .: : . . . . ..: :. :..: .:: ...:...... ::. . .:.
XP_011 LSFEMLTELVHRGSVYDAREFSVHFVCGGLAACMATLTVHPVDVLRT--RFAAQG-EPKV
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE0 RTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGL
: .... .: ... : .:..::: .::...:....::. ::
XP_011 RR---YKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRT
160 170 180 190 200 210
pF1KE0 KRAHQH
XP_011 ASQR
>>XP_016880417 (OMIM: 606521,607196,613710) PREDICTED: m (215 aa)
initn: 235 init1: 94 opt: 283 Z-score: 361.4 bits: 74.5 E(85289): 2.2e-13
Smith-Waterman score: 283; 28.8% identity (68.2% similar) in 198 aa overlap (96-289:10-199)
70 80 90 100 110 120
pF1KE0 RGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVV
:...: . :.: :.:.:. : .:. :.
XP_016 MVGYDPKPDGRNNTKFQVAVAGSVSGLVTRALISPFDVI
10 20 30
130 140 150 160 170 180
pF1KE0 NTRLKLQGAKFRNEDIVPT-NYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFN-PAIQF
. :..:: .. : :. .:.::..: .::...:: .:.:.: :. .: .. :.::
XP_016 KIRFQLQHERLSRSD--PSAKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQF
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE0 MFYEGLKRQLLKKRM-KLSSLDV-FIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPEN
. .: : . . . . ..: :. :..: .:: ...:...... ::. . .:.
XP_016 LSFEMLTELVHRGSVYDAREFSVHFVCGGLAACMATLTVHPVDVLRT--RFAAQG-EPKV
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE0 RTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGL
: .... .: ... : .:..::: .::...:....::. ::
XP_016 RR---YKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRT
160 170 180 190 200 210
pF1KE0 KRAHQH
XP_016 ASQR
>>NP_001034444 (OMIM: 615064) mitochondrial basic amino (303 aa)
initn: 282 init1: 80 opt: 272 Z-score: 345.6 bits: 72.0 E(85289): 1.6e-12
Smith-Waterman score: 302; 29.4% identity (58.8% similar) in 279 aa overlap (14-285:6-266)
10 20 30 40 50
pF1KE0 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVD--EKRKSKTTHMVLLEIIKE
.:: .:.:... : :.::...::::. :: . . : . :::.
NP_001 MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSVEKPQYRGTLHCFKSIIKQ
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 EGLLAPYRGW-FPVISSLCCSNFVYFYTFNSLKALWVKGQHSTTGKDLVVGFVAGVVNVL
:..:. :.: :... . .:. :.:.:: : :.. .....: .::... .
NP_001 ESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRAL---G-HDSPLNQFLAGAAAGAIQCV
60 70 80 90 100
120 130 140 150 160 170
pF1KE0 LTTPLWVVNTRLKLQGAKFRNEDIVPT-NYKGIIDAFHQIIRDEGISALWNGTFPSLLLV
. :. ...:::.:: : :. .::: .: . :: ::. .. : : ::
NP_001 ICCPMELAKTRLQLQ-------DAGPARTYKGSLDCLAQIYGHEGLRGVNRGMV-STLLR
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 FNPA--IQFMFYEGLKRQL-LKKRMKLSSLDVFIIGAVAKAIATTVTYPLQTVQSILRFG
.:. . :. :..: : : . .: ... :... .. :::...:.: :.
NP_001 ETPSFGVYFLTYDALTRALGCEPGDRLLVPKLLLAGGTSGIVSWLSTYPVDVVKSRLQAD
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE0 RHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTA
: :. :.:: .:: : : . .:: . ::.. . : :
NP_001 GLRGAPR------YRGILDCVHQSYRAEGWRVFTRGLASTLLRAFPVNAATFATVTVVLT
230 240 250 260 270
300
pF1KE0 ATFTVMGLKRAHQH
NP_001 YARGEEAGPEGEAVPAAPAGPALAQPSSL
280 290 300
>>XP_005263263 (OMIM: 113730,601665) PREDICTED: mitochon (306 aa)
initn: 204 init1: 92 opt: 272 Z-score: 345.5 bits: 72.0 E(85289): 1.7e-12
Smith-Waterman score: 272; 23.4% identity (58.8% similar) in 291 aa overlap (11-291:15-291)
10 20 30 40 50
pF1KE0 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKS------KTTHM
:. ...... : .. ::::::..::::. . . : .
XP_005 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
10 20 30 40 50 60
60 70 80 90 100
pF1KE0 VLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHSTT-GKDLVVGF
.. ..: :: . : : .. : . . ..... . . :... . :. ...:.
XP_005 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETPSLGSKILAGL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 VAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNGT
..: : :.. : ::..::. :. . . : : : : .:.. : ::...::.::
XP_005 TTGGVAVFIGQPTEVVKVRLQAQS---HLHGIKPR-YTGTYNAYRIIATTEGLTGLWKGT
130 140 150 160 170
170 180 190 200 210 220
pF1KE0 FPSLL--LVFNPAIQFMFYEGLKRQLLKKRMKLSSLDVFIIGA-VAKAIATTVTYPLQTV
:.:. ...: ... :. .:. ..:. . ... ...: .: ::... :...:
XP_005 TPNLMRSVIIN-CTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 QSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMFL
.. :: : :. ... . : ...::: ..:. ..::.
XP_005 KT--RFI-------NSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFV
240 250 260 270 280
290 300
pF1KE0 VYEKLTAATFTVMGLKRAHQH
.:.:
XP_005 CFEQLKRELSKSRQTMDCAT
290 300
>>XP_016869366 (OMIM: 610815,616839) PREDICTED: mitochon (183 aa)
initn: 216 init1: 119 opt: 268 Z-score: 343.6 bits: 70.9 E(85289): 2.1e-12
Smith-Waterman score: 268; 30.6% identity (65.6% similar) in 180 aa overlap (118-292:5-172)
90 100 110 120 130 140
pF1KE0 SLKALWVKGQHSTTGKDLVVGFVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYK
.:.::::..::: :: : .::
XP_016 MTLCITNPLWVTKTRLMLQYDAVVNSP--HRQYK
10 20 30
150 160 170 180 190 200
pF1KE0 GIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLK---RQLLKK--RMKLSS
:..:.. .: . ::. .:..: :.:. . . :.::: :: :: : ... . .::.
XP_016 GMFDTLVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLST
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE0 LDVFIIGAVAKAIATTVTYPLQTVQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFG
.. . ..:..: .:...::: :.: : ::. .. . ... .. . :. :
XP_016 VEYISVAALSKIFAVAATYPYQVV-------RARLQDQHMFYS---GVIDVITKTWRKEG
100 110 120 130 140
270 280 290 300
pF1KE0 IMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH
. :.:::. .:.... . . :.:::...
XP_016 VGGFYKGIAPNLIRVTPACCITFVVYENVSHFLLDLREKRK
150 160 170 180
>>NP_068605 (OMIM: 113730,601665) mitochondrial brown fa (307 aa)
initn: 204 init1: 92 opt: 270 Z-score: 343.0 bits: 71.6 E(85289): 2.3e-12
Smith-Waterman score: 270; 23.3% identity (58.6% similar) in 292 aa overlap (11-291:15-292)
10 20 30 40 50
pF1KE0 MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKS------KTTHM
:. ...... : .. ::::::..::::. . . : .
NP_068 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG
10 20 30 40 50 60
60 70 80 90 100
pF1KE0 VLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLKALWVKGQHS--TTGKDLVVG
.. ..: :: . : : .. : . . ..... . . :... . :. ...:
NP_068 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 FVAGVVNVLLTTPLWVVNTRLKLQGAKFRNEDIVPTNYKGIIDAFHQIIRDEGISALWNG
...: : :.. : ::..::. :. . . : : : : .:.. : ::...::.:
NP_068 LTTGGVAVFIGQPTEVVKVRLQAQS---HLHGIKPR-YTGTYNAYRIIATTEGLTGLWKG
130 140 150 160 170
170 180 190 200 210 220
pF1KE0 TFPSLL--LVFNPAIQFMFYEGLKRQLLKKRMKLSSLDVFIIGA-VAKAIATTVTYPLQT
: :.:. ...: ... :. .:. ..:. . ... ...: .: ::... :...
NP_068 TTPNLMRSVIIN-CTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 VQSILRFGRHRLNPENRTLGSLRNILYLLHQRVRRFGIMGLYKGLEAKLLQTVLTAALMF
:.. :: : :. ... . : ...::: ..:. ..::
NP_068 VKT--RFI-------NSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMF
240 250 260 270 280
290 300
pF1KE0 LVYEKLTAATFTVMGLKRAHQH
. .:.:
NP_068 VCFEQLKRELSKSRQTMDCAT
290 300
307 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 00:21:59 2016 done: Thu Nov 3 00:22:00 2016
Total Scan time: 5.540 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]