Result of FASTA (omim) for
pF1KE0565
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0565, 238 aa
1>>>pF1KE0565 238 - 238 aa - 238 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1938+/-0.000613; mu= 10.4351+/- 0.038
mean_var=359.2088+/-69.332, 0's: 0 Z-trim(118.0): 256 B-trim: 0 in 0/49
Lambda= 0.067671
statistics sampled from 30308 (30589) to 30308 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.359), width: 16
Scan time: 4.570
The best scores are: opt bits E(85289)
NP_001005922 (OMIM: 148022) keratin-associated pro ( 278) 1021 113.0 5.3e-25
NP_005544 (OMIM: 148021) keratin-associated protei ( 169) 849 95.9 4.7e-20
NP_112228 (OMIM: 608820) keratin-associated protei ( 167) 453 57.2 2e-08
NP_114163 (OMIM: 608822) keratin-associated protei ( 174) 440 56.0 5e-08
NP_112229 (OMIM: 608819) keratin-associated protei ( 177) 358 48.0 1.3e-05
XP_005252032 (OMIM: 187380,615629) PREDICTED: tena (1564) 341 47.9 0.00012
XP_011539190 (OMIM: 604266) PREDICTED: multiple ep (1364) 340 47.7 0.00012
XP_011539189 (OMIM: 604266) PREDICTED: multiple ep (1395) 340 47.7 0.00012
XP_006710469 (OMIM: 604266) PREDICTED: multiple ep (1436) 340 47.8 0.00012
XP_006717164 (OMIM: 187380,615629) PREDICTED: tena (1655) 341 48.0 0.00012
XP_005252031 (OMIM: 187380,615629) PREDICTED: tena (1655) 341 48.0 0.00012
XP_011516931 (OMIM: 187380,615629) PREDICTED: tena (1746) 341 48.0 0.00013
XP_011516930 (OMIM: 187380,615629) PREDICTED: tena (1746) 341 48.0 0.00013
NP_001400 (OMIM: 604266) multiple epidermal growth (1541) 340 47.8 0.00013
XP_016856022 (OMIM: 604266) PREDICTED: multiple ep (1559) 340 47.8 0.00013
XP_011539188 (OMIM: 604266) PREDICTED: multiple ep (1560) 340 47.8 0.00013
XP_005252030 (OMIM: 187380,615629) PREDICTED: tena (1837) 341 48.0 0.00013
XP_011539187 (OMIM: 604266) PREDICTED: multiple ep (1603) 340 47.8 0.00013
XP_011516928 (OMIM: 187380,615629) PREDICTED: tena (1929) 341 48.1 0.00013
XP_011516927 (OMIM: 187380,615629) PREDICTED: tena (2019) 341 48.1 0.00013
XP_006717161 (OMIM: 187380,615629) PREDICTED: tena (2019) 341 48.1 0.00013
XP_016870170 (OMIM: 187380,615629) PREDICTED: tena (2020) 341 48.1 0.00013
XP_005252029 (OMIM: 187380,615629) PREDICTED: tena (2110) 341 48.1 0.00014
XP_006717160 (OMIM: 187380,615629) PREDICTED: tena (2110) 341 48.1 0.00014
NP_002151 (OMIM: 187380,615629) tenascin precursor (2201) 341 48.2 0.00014
XP_016870169 (OMIM: 187380,615629) PREDICTED: tena (2292) 341 48.2 0.00014
XP_006717159 (OMIM: 187380,615629) PREDICTED: tena (2293) 341 48.2 0.00014
XP_016870168 (OMIM: 187380,615629) PREDICTED: tena (2293) 341 48.2 0.00014
XP_016870167 (OMIM: 187380,615629) PREDICTED: tena (2384) 341 48.2 0.00015
NP_001244234 (OMIM: 608821) keratin-associated pro ( 121) 313 43.3 0.00023
XP_016878162 (OMIM: 612454) PREDICTED: multiple ep (1021) 287 42.3 0.0037
XP_016878161 (OMIM: 612454) PREDICTED: multiple ep (1044) 287 42.4 0.0038
NP_115821 (OMIM: 612454) multiple epidermal growth (1044) 287 42.4 0.0038
XP_016878160 (OMIM: 612454) PREDICTED: multiple ep (1092) 287 42.4 0.0039
XP_016878159 (OMIM: 612454) PREDICTED: multiple ep (1097) 287 42.4 0.0039
XP_016865477 (OMIM: 612453,614399) PREDICTED: mult ( 760) 284 41.8 0.004
NP_000418 (OMIM: 152445,604117) loricrin [Homo sap ( 312) 277 40.5 0.0041
XP_016863885 (OMIM: 610083,615145) PREDICTED: tene (2443) 287 43.0 0.0057
XP_016863884 (OMIM: 610083,615145) PREDICTED: tene (2551) 287 43.0 0.0058
XP_016863883 (OMIM: 610083,615145) PREDICTED: tene (2622) 287 43.0 0.0059
NP_001073946 (OMIM: 610083,615145) teneurin-3 [Hom (2699) 287 43.1 0.006
XP_016863882 (OMIM: 610083,615145) PREDICTED: tene (2699) 287 43.1 0.006
XP_016863881 (OMIM: 610083,615145) PREDICTED: tene (2706) 287 43.1 0.006
XP_016863880 (OMIM: 610083,615145) PREDICTED: tene (2707) 287 43.1 0.006
XP_016863879 (OMIM: 610083,615145) PREDICTED: tene (2708) 287 43.1 0.006
XP_016863878 (OMIM: 610083,615145) PREDICTED: tene (2714) 287 43.1 0.006
XP_016863874 (OMIM: 610083,615145) PREDICTED: tene (2715) 287 43.1 0.006
XP_016863876 (OMIM: 610083,615145) PREDICTED: tene (2715) 287 43.1 0.006
XP_016863875 (OMIM: 610083,615145) PREDICTED: tene (2715) 287 43.1 0.006
XP_016863877 (OMIM: 610083,615145) PREDICTED: tene (2715) 287 43.1 0.006
>>NP_001005922 (OMIM: 148022) keratin-associated protein (278 aa)
initn: 2098 init1: 579 opt: 1021 Z-score: 569.8 bits: 113.0 E(85289): 5.3e-25
Smith-Waterman score: 1281; 60.3% identity (68.3% similar) in 287 aa overlap (1-238:1-278)
10 20 30 40 50
pF1KE0 MGCSGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGC-------CVPVCCCKPVCCCVPACS
::: :::::::::::::::.::::::: ::::::: :::::::::::: ::.::
NP_001 MGCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCS
10 20 30 40 50 60
60 70 80 90 100
pF1KE0 CSSCG-----SCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVCCSSS--CGSCGG
::::: : ::::: ::::::::::::::::::::::: : .:. ::::::
NP_001 CSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGS------CGGSKGGCGSCGG
70 80 90 100 110
110 120 130 140 150 160
pF1KE0 SKGVCGFRGGSKGGCGSCGCSQCSCYKP-CCCSSGCG-SSCCQSSCCKPSCSQSSC--C-
::: :: .. ::::: : : :: ::: .:. ::: ...: . .::...: :
NP_001 SKGGCG---SGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCG
120 130 140 150 160 170
170 180 190
pF1KE0 --KPCCSQSSCCKPCC---------CSSGCGSS---------CCQSSCCKPC--------
: :.. . :: : :.::::. ::. : : :
NP_001 GSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCG
180 190 200 210 220 230
200 210 220 230
pF1KE0 --CSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICCQCKI
::: ::::::::::::::::::::::::: ::::::::.::::::
NP_001 SSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
240 250 260 270
>>NP_005544 (OMIM: 148021) keratin-associated protein 5- (169 aa)
initn: 1556 init1: 641 opt: 849 Z-score: 481.0 bits: 95.9 E(85289): 4.7e-20
Smith-Waterman score: 1128; 63.0% identity (64.7% similar) in 238 aa overlap (1-238:1-169)
10 20 30 40 50 60
pF1KE0 MGCSGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGSC
::: ::::::::::::: ::::.:::: ::: .::.:: ::::::::::::::::::
NP_005 MGCCGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCG--
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVCCSSSCGSCGGSKGVCGFRGGSKGG
: :::::::::: :
NP_005 -------------KRGCGSCGGSKG----------------------------------G
60 70
130 140 150 160 170 180
pF1KE0 CGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQSSCCKPCCCSSGC
::::::::::: ::::::::::::::: ::::: ::: :::::::: :::
NP_005 CGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCS----------SSGR
80 90 100 110 120
190 200 210 220 230
pF1KE0 GSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICCQCKI
::::::::::::::: ::::::::::::::::: ::: ::::.: ::::
NP_005 GSSCCQSSCCKPCCS----------SSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCKI
130 140 150 160
>>NP_112228 (OMIM: 608820) keratin-associated protein 1- (167 aa)
initn: 661 init1: 285 opt: 453 Z-score: 272.1 bits: 57.2 E(85289): 2e-08
Smith-Waterman score: 453; 37.6% identity (57.0% similar) in 186 aa overlap (13-184:2-167)
10 20 30 40 50
pF1KE0 MGCSGCSGGCGSSCGGCGSS-CG--GCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSS-
.: : .: :: .:... : :::.:: : :: . :: :.: .:
NP_112 MTC--CQTSFCGYPSCSTS-GTCGSSCCQPSCC--ETSCCQPSCCQTSF
10 20 30 40
60 70 80 90 100 110
pF1KE0 CG-SCGGSKGVCGS-CGGCKGGCGSCGGSKGGCGSSCCVPVCC-SSSCGS-CGGSKGVCG
:: ...:.:.: : :. .: : .::: : :: .::::. :: . :. :
NP_112 CGFPSFSTSGTCSSSC--CQPSC---------CETSCCQPSCCQTSSCGTGCGIGGGI-G
50 60 70 80 90
120 130 140 150 160
pF1KE0 FRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPSCSQ-----SSCCKPC-CS
. :..:. :. . : : . : :: :: :.: : .:::.: :.
NP_112 Y--GQEGSSGAVSTRIRWCRPDCRVEGTCLPPCCVVSCTPPTCCQLHHAEASCCRPSYCG
100 110 120 130 140 150
170 180 190 200 210 220
pF1KE0 QSSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQS
:: ::.: :: .: .:
NP_112 QS-CCRPVCCCYSCEPTC
160
>>NP_114163 (OMIM: 608822) keratin-associated protein 1- (174 aa)
initn: 709 init1: 249 opt: 440 Z-score: 265.1 bits: 56.0 E(85289): 5e-08
Smith-Waterman score: 454; 39.2% identity (53.4% similar) in 189 aa overlap (69-237:2-171)
40 50 60 70 80 90
pF1KE0 VCCCKPVCCCVPACSCSSCGSCGGSKGVCGSCGGCKGG-CGSCGGS-KGGCGSSCCVPVC
.: :. . :: . : .: :::::: : :
NP_114 MTC--CQTSFCGYPSFSISGTCGSSCCQPSC
10 20
100 110 120 130 140 150
pF1KE0 CSSSCG---SCGGSKGVCGFRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKP
: .:: :: : ::: . : .: : :: : :::..:::.:
NP_114 CETSCCQPRSCQTS--FCGFPSFSTSGT--------------CSSSCCQPSCCETSCCQP
30 40 50 60 70
160 170 180 190 200
pF1KE0 SCSQSSCCKP-CCSQSSCCKPCCCSSGC-----GSSCCQSSC---CKPCCS-QSSCCKPC
:: ..:::.: ::. ::: : ..: ::: :. :.: ... ::
NP_114 SCCETSCCQPSCCQISSCGTGCGIGGGISYGQEGSSGAVSTRIRWCRPDSRVEGTYLPPC
80 90 100 110 120 130
210 220 230
pF1KE0 CCSSGCGSSCCQ-----SSCCKPCSSQSSCCVPICCQCKI
: : :::: .:::.: .::: :.:: :.
NP_114 CVVSCTPPSCCQLHHAQASCCRPSYCGQSCCRPVCC-CEPTC
140 150 160 170
>>NP_112229 (OMIM: 608819) keratin-associated protein 1- (177 aa)
initn: 801 init1: 243 opt: 358 Z-score: 221.7 bits: 48.0 E(85289): 1.3e-05
Smith-Waterman score: 460; 38.6% identity (51.9% similar) in 189 aa overlap (73-236:4-170)
50 60 70 80 90
pF1KE0 KPVCCCVPACSCSSCGSCGGSKGVCGSCGGCKGG-CG--SCGGSKGGCGSSCCVPVCCSS
:. . :: ::. : : :::::: : :: .
NP_112 MACCQTSFCGFPSCSTS-GTCGSSCCQPSCCET
10 20 30
100 110 120 130 140 150
pF1KE0 SCGSCGGSKGVCGFRGGSKGGCGSCGCSQCSCYKPCCC-SSGCG------SSCCQSSCCK
: : : : . :: .: :: .: :: .. :.::::.
NP_112 SS---------CQPR-----------CCETSCCQPSCCQTSFCGFPSFSTGGTCDSSCCQ
40 50 60 70
160 170 180 190 200
pF1KE0 PSCSQSSCCKPCCSQSSCCKPCCCSSGC------GSSCCQSSC---CKPCCS-QSSCCKP
::: ..:::.: : :.: : : .: ::: :. :.: : ...: :
NP_112 PSCCETSCCQPSCYQTSSCGTGCGIGGGIGYGQEGSSGAVSTRIRWCRPDCRVEGTCLPP
80 90 100 110 120 130
210 220 230
pF1KE0 CCCSSGCGSSCCQ-----SSCCKPCSSQSSCCVPICCQCKI
:: : :::: .:::.: .::: :.:: :
NP_112 CCVVSCTPPSCCQLHHAEASCCRPSYCGQSCCRPVCC-CYCSEPTC
140 150 160 170
>>XP_005252032 (OMIM: 187380,615629) PREDICTED: tenascin (1564 aa)
initn: 97 init1: 57 opt: 341 Z-score: 204.5 bits: 47.9 E(85289): 0.00012
Smith-Waterman score: 348; 27.2% identity (48.6% similar) in 257 aa overlap (3-236:185-425)
10 20 30
pF1KE0 MGCSG--CSGGCGSSCGGCGSSCGGCGSGYGG
:: : :.: : : .. : .:. :
XP_005 LDTRPFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLR-GRCIDGQCICDDGFTG
160 170 180 190 200 210
40 50 60 70 80
pF1KE0 --CGSGCCVPVC-----CCKPVCCCVPACSCSSCGSCGGSKGVCG-SCGGCKGGC--GSC
:.. : : : . :: : . . ..: :. .: :. .: : : :
XP_005 EDCSQLACPSDCNDQGKCVNGVCICFEGYAGADC-----SREICPVPCSEEHGTCVDGLC
220 230 240 250 260
90 100 110 120 130
pF1KE0 GGSKGGCGSSCCVPVCCSSSC---GSCGGSKGVC--GFRGGSKGGCGSCGCSQCSCYKPC
: :..: :.: .. : : : .. :: :: : . ::. : . :
XP_005 VCHDGFAGDDCNKPLCLNN-CYNRGRCVENECVCDEGFTGED--------CSELICPNDC
270 280 290 300 310
140 150 160 170 180 190
pF1KE0 CCSSGC--GSSCCQSSCCKPSCSQSSCCKPCCSQSSCCK-PCCCSSG-CGSSCCQSSCCK
. : :. :. . .:.. .: . : .:. : . : :. : : .: .. :
XP_005 FDRGRCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPA
320 330 340 350 360 370
200 210 220 230
pF1KE0 PCCSQSSCCKP-CCCSSG-CGSSCCQSSCCKPCSSQSSCCVPICCQCKI
: ... : : :..: :..: . .: . ::... : : : :
XP_005 DCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRC-VNGQCVCDEGYTGEDCSQLR
380 390 400 410 420 430
XP_005 CPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRD
440 450 460 470 480 490
>>XP_011539190 (OMIM: 604266) PREDICTED: multiple epider (1364 aa)
initn: 213 init1: 142 opt: 340 Z-score: 204.5 bits: 47.7 E(85289): 0.00012
Smith-Waterman score: 353; 25.4% identity (44.1% similar) in 272 aa overlap (3-236:813-1080)
10 20 30
pF1KE0 MGCSGCSGGCGSSCGGCGSSC-GGCGSGYGGC
: : .: : : : .: . : : :
XP_011 GFQGEDCGQECPVGTFGVNCSSSCSCGGAPCHGVTGQCRCPPGRTGEDCEADCPEGRWGL
790 800 810 820 830 840
40 50 60 70
pF1KE0 GSGCCVPVCC----CKP---VCCCVPACSCSSC---------GSCGGSKGVCGSCGGCKG
: :.: : : .: :.:. : : : .. :.. : :.
XP_011 GCQEICPACQHAARCDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHP
850 860 870 880 890 900
80 90 100 110 120
pF1KE0 GCGSCGGSKGGCGSSC------------CVPVC-CSSSCGSCGGSKGVCGFRGGSKGGCG
. : :. . : : :: : : ::.. ::: . .:.: ..: :
XP_011 ATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRC
910 920 930 940 950 960
130 140 150 160 170
pF1KE0 SCGCSQC----SCYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQS----SCCKPC
: : .: . : :. : . . ...: :. ... :. : . .: . :
XP_011 EQQCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSAC
970 980 990 1000 1010 1020
180 190 200 210 220 230
pF1KE0 CCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICC
:..: . . ..:: : .. : : . : .: :. : .: : :.
XP_011 NCTAGAACDAVNGSCLCPAGRRGPRCAETCPAHTYGHNCSQACACFNGAS----CDPVHG
1030 1040 1050 1060 1070
pF1KE0 QCKI
::
XP_011 QCHCAPGWMGPSCLQACPAGLYGDNCRHSCLCQNGGTCDPVSGHCACPEGWAGLACEKEC
1080 1090 1100 1110 1120 1130
>>XP_011539189 (OMIM: 604266) PREDICTED: multiple epider (1395 aa)
initn: 263 init1: 142 opt: 340 Z-score: 204.4 bits: 47.7 E(85289): 0.00012
Smith-Waterman score: 353; 25.4% identity (44.1% similar) in 272 aa overlap (3-236:605-872)
10 20 30
pF1KE0 MGCSGCSGGCGSSCGGCGSSC-GGCGSGYGGC
: : .: : : : .: . : : :
XP_011 GFQGEDCGQECPVGTFGVNCSSSCSCGGAPCHGVTGQCRCPPGRTGEDCEADCPEGRWGL
580 590 600 610 620 630
40 50 60 70
pF1KE0 GSGCCVPVCC----CKP---VCCCVPACSCSSC---------GSCGGSKGVCGSCGGCKG
: :.: : : .: :.:. : : : .. :.. : :.
XP_011 GCQEICPACQHAARCDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHP
640 650 660 670 680 690
80 90 100 110 120
pF1KE0 GCGSCGGSKGGCGSSC------------CVPVC-CSSSCGSCGGSKGVCGFRGGSKGGCG
. : :. . : : :: : : ::.. ::: . .:.: ..: :
XP_011 ATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRC
700 710 720 730 740 750
130 140 150 160 170
pF1KE0 SCGCSQC----SCYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQS----SCCKPC
: : .: . : :. : . . ...: :. ... :. : . .: . :
XP_011 EQQCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSAC
760 770 780 790 800 810
180 190 200 210 220 230
pF1KE0 CCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICC
:..: . . ..:: : .. : : . : .: :. : .: : :.
XP_011 NCTAGAACDAVNGSCLCPAGRRGPRCAETCPAHTYGHNCSQACACFNGAS----CDPVHG
820 830 840 850 860 870
pF1KE0 QCKI
::
XP_011 QCHCAPGWMGPSCLQACPAGLYGDNCRHSCLCQNGGTCDPVSGHCACPEGWAGLACEKEC
880 890 900 910 920 930
>>XP_006710469 (OMIM: 604266) PREDICTED: multiple epider (1436 aa)
initn: 263 init1: 142 opt: 340 Z-score: 204.3 bits: 47.8 E(85289): 0.00012
Smith-Waterman score: 353; 25.4% identity (44.1% similar) in 272 aa overlap (3-236:646-913)
10 20 30
pF1KE0 MGCSGCSGGCGSSCGGCGSSC-GGCGSGYGGC
: : .: : : : .: . : : :
XP_006 GFQGEDCGQECPVGTFGVNCSSSCSCGGAPCHGVTGQCRCPPGRTGEDCEADCPEGRWGL
620 630 640 650 660 670
40 50 60 70
pF1KE0 GSGCCVPVCC----CKP---VCCCVPACSCSSC---------GSCGGSKGVCGSCGGCKG
: :.: : : .: :.:. : : : .. :.. : :.
XP_006 GCQEICPACQHAARCDPETGACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHP
680 690 700 710 720 730
80 90 100 110 120
pF1KE0 GCGSCGGSKGGCGSSC------------CVPVC-CSSSCGSCGGSKGVCGFRGGSKGGCG
. : :. . : : :: : : ::.. ::: . .:.: ..: :
XP_006 ATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRC
740 750 760 770 780 790
130 140 150 160 170
pF1KE0 SCGCSQC----SCYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQS----SCCKPC
: : .: . : :. : . . ...: :. ... :. : . .: . :
XP_006 EQQCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSAC
800 810 820 830 840 850
180 190 200 210 220 230
pF1KE0 CCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICC
:..: . . ..:: : .. : : . : .: :. : .: : :.
XP_006 NCTAGAACDAVNGSCLCPAGRRGPRCAETCPAHTYGHNCSQACACFNGAS----CDPVHG
860 870 880 890 900 910
pF1KE0 QCKI
::
XP_006 QCHCAPGWMGPSCLQACPAGLYGDNCRHSCLCQNGGTCDPVSGHCACPEGWAGLACEKEC
920 930 940 950 960 970
>>XP_006717164 (OMIM: 187380,615629) PREDICTED: tenascin (1655 aa)
initn: 97 init1: 57 opt: 341 Z-score: 204.3 bits: 48.0 E(85289): 0.00012
Smith-Waterman score: 348; 27.2% identity (48.6% similar) in 257 aa overlap (3-236:185-425)
10 20 30
pF1KE0 MGCSG--CSGGCGSSCGGCGSSCGGCGSGYGG
:: : :.: : : .. : .:. :
XP_006 LDTRPFCSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLR-GRCIDGQCICDDGFTG
160 170 180 190 200 210
40 50 60 70 80
pF1KE0 --CGSGCCVPVC-----CCKPVCCCVPACSCSSCGSCGGSKGVCG-SCGGCKGGC--GSC
:.. : : : . :: : . . ..: :. .: :. .: : : :
XP_006 EDCSQLACPSDCNDQGKCVNGVCICFEGYAGADC-----SREICPVPCSEEHGTCVDGLC
220 230 240 250 260
90 100 110 120 130
pF1KE0 GGSKGGCGSSCCVPVCCSSSC---GSCGGSKGVC--GFRGGSKGGCGSCGCSQCSCYKPC
: :..: :.: .. : : : .. :: :: : . ::. : . :
XP_006 VCHDGFAGDDCNKPLCLNN-CYNRGRCVENECVCDEGFTGED--------CSELICPNDC
270 280 290 300 310
140 150 160 170 180 190
pF1KE0 CCSSGC--GSSCCQSSCCKPSCSQSSCCKPCCSQSSCCK-PCCCSSG-CGSSCCQSSCCK
. : :. :. . .:.. .: . : .:. : . : :. : : .: .. :
XP_006 FDRGRCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPA
320 330 340 350 360 370
200 210 220 230
pF1KE0 PCCSQSSCCKP-CCCSSG-CGSSCCQSSCCKPCSSQSSCCVPICCQCKI
: ... : : :..: :..: . .: . ::... : : : :
XP_006 DCHNRGRCVDGRCECDDGFTGADCGELKCPNGCSGHGRC-VNGQCVCDEGYTGEDCSQLR
380 390 400 410 420 430
XP_006 CPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRD
440 450 460 470 480 490
238 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 23:07:10 2016 done: Wed Nov 2 23:07:11 2016
Total Scan time: 4.570 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]