Result of FASTA (omim) for
pF1KE0568
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0568, 288 aa
1>>>pF1KE0568 288 - 288 aa - 288 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2402+/-0.000811; mu= 6.1913+/- 0.051
mean_var=432.2285+/-86.463, 0's: 0 Z-trim(115.0): 272 B-trim: 34 in 1/48
Lambda= 0.061690
statistics sampled from 24838 (25111) to 24838 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.506), E-opt: 0.2 (0.294), width: 16
Scan time: 4.180
The best scores are: opt bits E(85289)
NP_001005922 (OMIM: 148022) keratin-associated pro ( 278) 1682 163.9 3.1e-40
NP_005544 (OMIM: 148021) keratin-associated protei ( 169) 953 98.7 8.2e-21
NP_000418 (OMIM: 152445,604117) loricrin [Homo sap ( 312) 550 63.2 7e-10
NP_061978 (OMIM: 600985,606408,615963) tenascin-X (4242) 373 49.3 0.00015
NP_000217 (OMIM: 144200,607606) keratin, type I cy ( 623) 341 45.1 0.0004
NP_114163 (OMIM: 608822) keratin-associated protei ( 174) 329 43.2 0.00044
NP_000412 (OMIM: 113800,148080,607602,609165) kera ( 584) 335 44.5 0.00056
XP_005257400 (OMIM: 113800,148080,607602,609165) P ( 624) 335 44.6 0.00058
XP_011539189 (OMIM: 604266) PREDICTED: multiple ep (1395) 332 44.9 0.001
XP_006710469 (OMIM: 604266) PREDICTED: multiple ep (1436) 332 44.9 0.0011
XP_016878162 (OMIM: 612454) PREDICTED: multiple ep (1021) 326 44.1 0.0013
NP_115821 (OMIM: 612454) multiple epidermal growth (1044) 326 44.2 0.0013
XP_016878161 (OMIM: 612454) PREDICTED: multiple ep (1044) 326 44.2 0.0013
XP_016878160 (OMIM: 612454) PREDICTED: multiple ep (1092) 326 44.2 0.0013
XP_016878159 (OMIM: 612454) PREDICTED: multiple ep (1097) 326 44.2 0.0013
NP_112228 (OMIM: 608820) keratin-associated protei ( 167) 294 40.0 0.0037
XP_016865156 (OMIM: 610119) PREDICTED: teneurin-2 (2613) 312 43.6 0.0049
XP_006714960 (OMIM: 610119) PREDICTED: teneurin-2 (2758) 312 43.6 0.0051
NP_001116151 (OMIM: 610119) teneurin-2 isoform 1 [ (2765) 312 43.6 0.0051
XP_005266007 (OMIM: 610119) PREDICTED: teneurin-2 (2765) 312 43.6 0.0051
XP_011541996 (OMIM: 612453,614399) PREDICTED: mult (1140) 297 41.6 0.0082
NP_001243474 (OMIM: 612453,614399) multiple epider (1140) 297 41.6 0.0082
NP_115822 (OMIM: 612453,614399) multiple epidermal (1140) 297 41.6 0.0082
XP_016865476 (OMIM: 612453,614399) PREDICTED: mult (1195) 297 41.7 0.0084
>>NP_001005922 (OMIM: 148022) keratin-associated protein (278 aa)
initn: 2317 init1: 691 opt: 1682 Z-score: 843.3 bits: 163.9 E(85289): 3.1e-40
Smith-Waterman score: 1682; 71.5% identity (77.2% similar) in 298 aa overlap (1-288:1-278)
10 20 30 40 50 60
pF1KE0 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVC
::::::::::::.:::::::::::::::::::::::: :::::::.:::::::
NP_001 MGCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGS-------GSSCCVPVCCCKPVC
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 CCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGG
: ::.::::::: ::: :: ::::::: :::: :::::::::::::::::::::::
NP_001 CRVPTCSCSSCG-----KGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGG
60 70 80 90 100
130 140 150 160 170
pF1KE0 CGSCGGSKGGCVS-CGGSKGGCG---------SCGGSKGGCVSCGGSKGGCGSCGGSKGG
::::::::::: : ::: ..: : .: ::: :::::::: :::.
NP_001 CGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCG--KGGCGSCGCSKGA
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 CGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGC
:::::::::::::::: :::::::: :. .: . : .::::.: :: :: :.:
NP_001 CGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGC---GGCGSGCGVPVCC---CSCSSC
170 180 190 200 210 220
240 250 260 270 280
pF1KE0 GSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI
:: ... : : : ::::::: ::::::::::::::.::::::::::::::::::
NP_001 GSCAGSKGGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
230 240 250 260 270
>>NP_005544 (OMIM: 148021) keratin-associated protein 5- (169 aa)
initn: 1767 init1: 822 opt: 953 Z-score: 494.6 bits: 98.7 E(85289): 8.2e-21
Smith-Waterman score: 1012; 49.3% identity (52.8% similar) in 288 aa overlap (1-288:1-169)
10 20 30 40 50 60
pF1KE0 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVC
::::::::::::.:::: :.: :.::::: ::: :::.:. ::::::
NP_005 MGCCGCSGGCGSSCGGCDSSC--------------GSCGSGCRGCGPSCCAPVYCCKPVC
10 20 30 40
70 80 90 100 110 120
pF1KE0 CCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGG
::::::::::::
NP_005 CCVPACSCSSCG------------------------------------------------
50
130 140 150 160 170 180
pF1KE0 CGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGG
: :
NP_005 ---------------------------------------------------------KRG
60
190 200 210 220 230 240
pF1KE0 CGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCC
::::::::::::::::::::::::::::::::::::: ::::: ::. .: . ::.::
NP_005 CGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGR
70 80 90 100 110 120
250 260 270 280
pF1KE0 KPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI
::::::::::::::::::::::::::.:::::: :::::: ::::
NP_005 GSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCKI
130 140 150 160
>>NP_000418 (OMIM: 152445,604117) loricrin [Homo sapiens (312 aa)
initn: 392 init1: 392 opt: 550 Z-score: 298.3 bits: 63.2 E(85289): 7e-10
Smith-Waterman score: 559; 41.9% identity (56.1% similar) in 296 aa overlap (2-287:32-302)
10 20 30
pF1KE0 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGC
: :: :: ::: :. ::::: :.: :
NP_000 SYQKKQPTPQPPVDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGG-GYS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 GSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGC
:.:::: .:: :: :. . .:. .: :: : :: .: ::: ::
NP_000 GGGCGGGSSGGGGGGG---------------IGGCGGGSGGSVKYSGGGGSSGGGS--GC
70 80 90 100
100 110 120 130 140
pF1KE0 VSCGGSKGGCGSCGG--SKGGCGSCGGSKGGCGSCGGSKGGCVSCGGS--KGGCGSCGGS
: ::. .:: : :: :.:: ..: .: :: .: ::: :: : ::. .: .: :
NP_000 FSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGS--GCFSSGGGGFSGQAVQCQ-S
110 120 130 140 150 160
150 160 170 180 190 200
pF1KE0 KGGCVSCGGSKGGCGSCGGSKGGCGS-CGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCC
:: :: :::.:: ..: .: :: :: :: : :: : :::.:: :: :. . . :
NP_000 YGG-VSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSC
170 180 190 200 210
210 220 230 240 250 260
pF1KE0 C---SSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCG--S
: : ::: .: . : ::.: :.: :.: .: : ..: :: :
NP_000 APQPSYGGGSSGGGGSGGSGCFSSGGGGGS---SGCGGGSSGIGSGCIISGGGSVCGGGS
220 230 240 250 260 270
270 280
pF1KE0 SCCQSSCCNPCCSQSSCCVPVCCQCKI
: .. . : :. ::.: : .
NP_000 SGGGGGGSSVGGSGSGKGVPICHQTQQKQAPTWPSK
280 290 300 310
>>NP_061978 (OMIM: 600985,606408,615963) tenascin-X isof (4242 aa)
initn: 98 init1: 80 opt: 373 Z-score: 202.9 bits: 49.3 E(85289): 0.00015
Smith-Waterman score: 391; 29.3% identity (44.9% similar) in 321 aa overlap (8-287:424-737)
10 20 30
pF1KE0 MGCCGCSGGCGSGCGG--CGSGCGG---CGSGCGGCG
: :. ::. : : : : .: :.
NP_061 YSGDDCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCENGVCVCN
400 410 420 430 440 450
40 50 60 70 80 90
pF1KE0 SGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGS--CGGSKGGYGSCGGSKGG
.: .: : .: ..: : . : : :. . .::. : :. : : : :
NP_061 AGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGDCRGRGRC--VDGR
460 470 480 490 500 510
100 110 120 130 140
pF1KE0 CVSCGGSKG-GCGS--CGGSKGGCGSCGGSKGGCGSCGGSKG-GCV--SCGGSKGGCGSC
:: : : ::: : :. : : : : : .: .: : :: :. : :.:
NP_061 CVCNPGFTGEDCGSRRCPGDCRGHGLC--EDGVCVCDAGYSGEDCSTRSCPGGCRGRGQC
520 530 540 550 560
150 160 170 180 190
pF1KE0 GGSKGGCVSCGGSKG-GCG--SCGGS---KGGC--GSC----GGSKGGCG--SCGGSKGG
: :: : .: :: .: .. .: : : : : . :. .: .. :
NP_061 --LDGRCVCEDGYSGEDCGVRQCPNDCSQHGVCQDGVCICWEGYVSEDCSIRTCPSNCHG
570 580 590 600 610 620
200 210 220 230
pF1KE0 CGSCGCSQCSC----CKPCCCSSGCGSSC-----C-QSSC-CKPCCSSSGCGSSCCQSSC
: : ..: : : : . : ..: : :. : :. .. ::. .:
NP_061 RGRCEEGRCLCDPGYTGPTCATRMCPADCRGRGRCVQGVCLCHVGYGGEDCGQEEPPASA
630 640 650 660 670 680
240 250 260 270 280
pF1KE0 CKPYCCQSSCCKP--C-CSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI
: : :. : : . : .: ..: . : ... : : ::
NP_061 CPGGCGPRELCRAGQCVCVEGFRGPDCAIQTCPGDCRGRGECH-DGSCVCKDGYAGEDCG
690 700 710 720 730 740
NP_061 EEVPTIEGMRMHLLEETTVRTEWTPAPGPVDAYEIQFIPTTEGASPPFTARVPSSASAYD
750 760 770 780 790 800
>>NP_000217 (OMIM: 144200,607606) keratin, type I cytosk (623 aa)
initn: 684 init1: 261 opt: 341 Z-score: 195.1 bits: 45.1 E(85289): 0.0004
Smith-Waterman score: 362; 43.0% identity (57.0% similar) in 193 aa overlap (7-197:467-623)
10 20 30
pF1KE0 MGCCGCSGGCGS-GCGGCGSGCGGCGSGC-GGCGSG
:.: :. : :: :.. :. : : :: :..
NP_000 YSLLLSIKMRLEKEIETYHNLLEGGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGS
440 450 460 470 480 490
40 50 60 70 80 90
pF1KE0 CGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSC
:: ::: : :.: :: ::: :.::. .:: ::
NP_000 YGGGGSGGGYGGGS-----------------------GSRGGSGGSYGGGSGSGGGS---
500 510 520 530
100 110 120 130 140 150
pF1KE0 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSC
::. :: :: :: .:: : :: .:: : :. :: : ::: :: :. .::.::
NP_000 GGGYGG-GSGGGHSGGSG--GGHSGGSG--GNYGGGSGSGGGSGGGYGGGSGSRGGS---
540 550 560 570 580
160 170 180 190 200 210
pF1KE0 GGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSS
:::.:: .. :: .:: : ::.. . :: :: :: :. . :
NP_000 GGSHGGGSGFGGESGG--SYGGGEEASGSGGGYGGGSGKSSHS
590 600 610 620
220 230 240 250 260 270
pF1KE0 CCQSSCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCS
>>NP_114163 (OMIM: 608822) keratin-associated protein 1- (174 aa)
initn: 386 init1: 238 opt: 329 Z-score: 194.4 bits: 43.2 E(85289): 0.00044
Smith-Waterman score: 349; 51.2% identity (61.6% similar) in 86 aa overlap (214-285:2-87)
190 200 210 220 230 240
pF1KE0 CGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCK-PCCSSSG-CGSSCCQSSCCK
.:::.: : : : :: ::::::: :::.
NP_114 MTCCQTSFCGYPSFSISGTCGSSCCQPSCCE
10 20 30
250 260 270 280
pF1KE0 PYCCQSSCCKP--C----------CSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI
::: :. : :::: : :::..:::.: : ..::: : :::
NP_114 TSCCQPRSCQTSFCGFPSFSTSGTCSSSCCQPSCCETSCCQPSCCETSCCQPSCCQISSC
40 50 60 70 80 90
NP_114 GTGCGIGGGISYGQEGSSGAVSTRIRWCRPDSRVEGTYLPPCCVVSCTPPSCCQLHHAQA
100 110 120 130 140 150
>>NP_000412 (OMIM: 113800,148080,607602,609165) keratin, (584 aa)
initn: 363 init1: 246 opt: 335 Z-score: 192.4 bits: 44.5 E(85289): 0.00056
Smith-Waterman score: 335; 53.5% identity (65.9% similar) in 129 aa overlap (72-197:457-577)
50 60 70 80 90 100
pF1KE0 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGC
:: ::. : :: ::. :: : :::.::
NP_000 CQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGG
430 440 450 460 470 480
110 120 130 140 150
pF1KE0 --GSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKG
:. :::.:: : :::.:: :: ::. :: : :: .:: .: :: :: : ::. :
NP_000 HGGGHGGSSGG-GYGGGSSGG-GSSGGGYGGGSSSGG-HGG-SSSGGYGGG--SSGGGGG
490 500 510 520 530 540
160 170 180 190 200 210
pF1KE0 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC-GSCGCSQCSCCKPCCCSSGCGSSCCQS
: : :::.:: .: ::. :: .: :: :.. :: : :
NP_000 GYG--GGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPRY
550 560 570 580
220 230 240 250 260 270
pF1KE0 SCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSC
>>XP_005257400 (OMIM: 113800,148080,607602,609165) PREDI (624 aa)
initn: 351 init1: 251 opt: 335 Z-score: 192.2 bits: 44.6 E(85289): 0.00058
Smith-Waterman score: 335; 53.5% identity (65.9% similar) in 129 aa overlap (72-197:457-577)
50 60 70 80 90 100
pF1KE0 CGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGC
:: ::. : :: ::. :: : :::.::
XP_005 CQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGG
430 440 450 460 470 480
110 120 130 140 150
pF1KE0 --GSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCVSCGGSKG
:. :::.:: : :::.:: :: ::. :: : :: .:: .: :: :: : ::. :
XP_005 HGGGHGGSSGG-GYGGGSSGG-GSSGGGYGGGSSSGG-HGG-SSSGGYGGG--SSGGGGG
490 500 510 520 530 540
160 170 180 190 200 210
pF1KE0 GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC-GSCGCSQCSCCKPCCCSSGCGSSCCQS
: : :::.:: .: ::. :: .: :: :.. :: : :
XP_005 GYG--GGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPRSAETSWDTNKTRVIK
550 560 570 580 590
220 230 240 250 260 270
pF1KE0 SCCKPCCSSSGCGSSCCQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCSQSSC
XP_005 TIIEEVAPDGRVLSSMVESETKKHYY
600 610 620
>>XP_011539189 (OMIM: 604266) PREDICTED: multiple epider (1395 aa)
initn: 199 init1: 102 opt: 332 Z-score: 187.5 bits: 44.9 E(85289): 0.001
Smith-Waterman score: 384; 29.3% identity (47.8% similar) in 324 aa overlap (4-285:939-1248)
10 20 30
pF1KE0 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGS
: :::: .: : : : : : :.
XP_011 DPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNG-GLCDPHTGRCLCPAGWTGD
910 920 930 940 950 960
40 50 60 70 80
pF1KE0 GCGG-CGSGCGG--CGSSC-CVPICCCKPV---CCCVPACSCSSC------GSCGGSKGG
: . : : : :.. : : : :. : : : :. . :.: :: : . .
XP_011 KCQSPCLRGWFGEACAQRCSCPPGAACHHVTGACRCPPGFTGSGCEQACPPGSFGEDCAQ
970 980 990 1000 1010 1020
90 100 110 120 130
pF1KE0 YGSCGGSKGGCVSCGGSKGGCGSCGGSKG-GCGS-CG-GSKG-GCGS-CGGSKGGCVSCG
. .: : . .: . : :. .: .: .: . : : : :: . :: .:: ::
XP_011 MCQCPGENP---ACHPATGTCSCAAGYHGPSCQQRCPPGRYGPGCEQLCGCLNGG--SCD
1030 1040 1050 1060 1070 1080
140 150 160 170 180 190
pF1KE0 GSKGGCGSCGGSKG-GC-VSCGGSKGG--CGS-CGGSKGGCGSCGGSKGGCGSCGGSKGG
.. :.: : : : ..: .. : : :: ..:. .: : : : ...:
XP_011 AATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGA--ACDPVTGTC-LCPPGRAG
1090 1100 1110 1120 1130
200 210 220 230
pF1KE0 CGSC--GCSQ----CSCCKPCCCSSG--CGSSCCQSSC--------CKPCCSSSGCGSSC
: :: : .: . : : .: : .: . :: :. : . :..:
XP_011 V-RCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCELACPPGRYGAAC
1140 1150 1160 1170 1180 1190
240 250 260 270 280
pF1KE0 CQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCS--QSSCCVPVC-CQCKI
. : : ..: :.: .. :: . ..: .:: ... : .: ::
XP_011 -HLECS---CHNNSTCEPATGTCRCGPGFYGQACEHPCPPGFHGAGCQGLCWCQHGAPCD
1200 1210 1220 1230 1240 1250
XP_011 PISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDGGAPCDPVTGLCLCPPGRSGATC
1260 1270 1280 1290 1300 1310
>>XP_006710469 (OMIM: 604266) PREDICTED: multiple epider (1436 aa)
initn: 199 init1: 102 opt: 332 Z-score: 187.4 bits: 44.9 E(85289): 0.0011
Smith-Waterman score: 384; 29.3% identity (47.8% similar) in 324 aa overlap (4-285:980-1289)
10 20 30
pF1KE0 MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGCGS
: :::: .: : : : : : :.
XP_006 DPVSGHCACPEGWAGLACEKECLPRDVRAGCRHSGGCLNG-GLCDPHTGRCLCPAGWTGD
950 960 970 980 990 1000
40 50 60 70 80
pF1KE0 GCGG-CGSGCGG--CGSSC-CVPICCCKPV---CCCVPACSCSSC------GSCGGSKGG
: . : : : :.. : : : :. : : : :. . :.: :: : . .
XP_006 KCQSPCLRGWFGEACAQRCSCPPGAACHHVTGACRCPPGFTGSGCEQACPPGSFGEDCAQ
1010 1020 1030 1040 1050 1060
90 100 110 120 130
pF1KE0 YGSCGGSKGGCVSCGGSKGGCGSCGGSKG-GCGS-CG-GSKG-GCGS-CGGSKGGCVSCG
. .: : . .: . : :. .: .: .: . : : : :: . :: .:: ::
XP_006 MCQCPGENP---ACHPATGTCSCAAGYHGPSCQQRCPPGRYGPGCEQLCGCLNGG--SCD
1070 1080 1090 1100 1110 1120
140 150 160 170 180 190
pF1KE0 GSKGGCGSCGGSKG-GC-VSCGGSKGG--CGS-CGGSKGGCGSCGGSKGGCGSCGGSKGG
.. :.: : : : ..: .. : : :: ..:. .: : : : ...:
XP_006 AATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGA--ACDPVTGTC-LCPPGRAG
1130 1140 1150 1160 1170 1180
200 210 220 230
pF1KE0 CGSC--GCSQ----CSCCKPCCCSSG--CGSSCCQSSC--------CKPCCSSSGCGSSC
: :: : .: . : : .: : .: . :: :. : . :..:
XP_006 V-RCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCELACPPGRYGAAC
1190 1200 1210 1220 1230
240 250 260 270 280
pF1KE0 CQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQSSCCNPCCS--QSSCCVPVC-CQCKI
. : : ..: :.: .. :: . ..: .:: ... : .: ::
XP_006 -HLECS---CHNNSTCEPATGTCRCGPGFYGQACEHPCPPGFHGAGCQGLCWCQHGAPCD
1240 1250 1260 1270 1280 1290
XP_006 PISGRCLCPAGFHGHFCERGCEPGSFGEGCHQRCDCDGGAPCDPVTGLCLCPPGRSGATC
1300 1310 1320 1330 1340 1350
288 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 22:54:16 2016 done: Wed Nov 2 22:54:17 2016
Total Scan time: 4.180 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]