Result of FASTA (ccds) for
pF1KE0676
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0676, 396 aa
1>>>pF1KE0676 396 - 396 aa - 396 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3262+/-0.00113; mu= 6.8654+/- 0.066
mean_var=155.3411+/-35.567, 0's: 0 Z-trim(106.2): 99 B-trim: 115 in 1/49
Lambda= 0.102904
statistics sampled from 8750 (8847) to 8750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.272), width: 16
Scan time: 2.500
The best scores are: opt bits E(32554)
CCDS9947.1 VRK1 gene_id:7443|Hs108|chr14 ( 396) 2664 407.9 8e-114
CCDS46291.1 VRK2 gene_id:7444|Hs108|chr2 ( 396) 1152 183.5 3e-46
CCDS1859.1 VRK2 gene_id:7444|Hs108|chr2 ( 508) 1152 183.6 3.6e-46
CCDS46292.1 VRK2 gene_id:7444|Hs108|chr2 ( 485) 1121 178.9 8.5e-45
CCDS33076.1 VRK3 gene_id:51231|Hs108|chr19 ( 424) 733 121.3 1.7e-27
CCDS12791.1 VRK3 gene_id:51231|Hs108|chr19 ( 474) 733 121.3 1.8e-27
CCDS77334.1 VRK3 gene_id:51231|Hs108|chr19 ( 412) 659 110.3 3.3e-24
CCDS11806.1 CSNK1D gene_id:1453|Hs108|chr17 ( 409) 427 75.8 7.7e-14
CCDS11805.1 CSNK1D gene_id:1453|Hs108|chr17 ( 415) 427 75.9 7.8e-14
CCDS13970.1 CSNK1E gene_id:1454|Hs108|chr22 ( 416) 419 74.7 1.8e-13
CCDS47303.1 CSNK1A1 gene_id:1452|Hs108|chr5 ( 337) 401 71.9 9.7e-13
CCDS64291.1 CSNK1A1 gene_id:1452|Hs108|chr5 ( 325) 398 71.5 1.3e-12
CCDS9363.1 CSNK1A1L gene_id:122011|Hs108|chr13 ( 337) 385 69.5 5e-12
CCDS59491.1 CSNK1G3 gene_id:1456|Hs108|chr5 ( 424) 383 69.3 7.4e-12
CCDS10192.2 CSNK1G1 gene_id:53944|Hs108|chr15 ( 422) 382 69.2 8.1e-12
CCDS4135.1 CSNK1G3 gene_id:1456|Hs108|chr5 ( 447) 376 68.3 1.6e-11
CCDS43355.1 CSNK1G3 gene_id:1456|Hs108|chr5 ( 455) 376 68.3 1.6e-11
CCDS59492.1 CSNK1G3 gene_id:1456|Hs108|chr5 ( 348) 374 67.9 1.6e-11
CCDS34218.1 CSNK1G3 gene_id:1456|Hs108|chr5 ( 423) 374 68.0 1.9e-11
CCDS12077.1 CSNK1G2 gene_id:1455|Hs108|chr19 ( 415) 373 67.8 2e-11
CCDS59493.1 CSNK1G3 gene_id:1456|Hs108|chr5 ( 311) 369 67.1 2.5e-11
>>CCDS9947.1 VRK1 gene_id:7443|Hs108|chr14 (396 aa)
initn: 2664 init1: 2664 opt: 2664 Z-score: 2156.9 bits: 407.9 E(32554): 8e-114
Smith-Waterman score: 2664; 100.0% identity (100.0% similar) in 396 aa overlap (1-396:1-396)
10 20 30 40 50 60
pF1KE0 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 SVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 KNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 KNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 RGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 RGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 KYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 KYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKK
310 320 330 340 350 360
370 380 390
pF1KE0 EIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK
::::::::::::::::::::::::::::::::::::
CCDS99 EIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK
370 380 390
>>CCDS46291.1 VRK2 gene_id:7444|Hs108|chr2 (396 aa)
initn: 1150 init1: 729 opt: 1152 Z-score: 943.8 bits: 183.5 E(32554): 3e-46
Smith-Waterman score: 1152; 55.4% identity (79.0% similar) in 314 aa overlap (12-324:4-313)
10 20 30 40 50
pF1KE0 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLA-DMNSS
. . : .: : :... :: ..: .: ::.:::: :::: :.
CCDS46 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKP
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 ESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH
:. :: ::::: ..:::::.:::::::.:: . :.:::. ..: :::.: ..::::
CCDS46 EK---DARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT
60 70 80 90 100
120 130 140 150 160 170
pF1KE0 DKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIK
. .:.:::::.:.:.: ::::: :. :...:::::..:.::.::::::.::::::::
CCDS46 EFKGRSYRFMVMERLGIDLQKISGQNGT-FKKSTVLQLGIRMLDVLEYIHENEYVHGDIK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPS
:.::::.:::::::::.::::.:::::.: ::.:.:.:.. :.:::::::.:::.::: :
CCDS46 AANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE0 RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEI
::.:.:::::::..:: :.::::.::::: :. .: ... . . : : .. ::
CCDS46 RRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEI
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE0 AKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRK
:... .. : : ::: :. :. ::
CCDS46 AQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAA
290 300 310 320 330 340
>>CCDS1859.1 VRK2 gene_id:7444|Hs108|chr2 (508 aa)
initn: 1183 init1: 729 opt: 1152 Z-score: 942.3 bits: 183.6 E(32554): 3.6e-46
Smith-Waterman score: 1163; 47.3% identity (71.4% similar) in 406 aa overlap (12-396:4-405)
10 20 30 40 50
pF1KE0 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLA-DMNSS
. . : .: : :... :: ..: .: ::.:::: :::: :.
CCDS18 MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKP
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 ESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH
:. :: ::::: ..:::::.:::::::.:: . :.:::. ..: :::.: ..::::
CCDS18 EK---DARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLT
60 70 80 90 100
120 130 140 150 160 170
pF1KE0 DKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIK
. .:.:::::.:.:.: ::::: :. :...:::::..:.::.::::::.::::::::
CCDS18 EFKGRSYRFMVMERLGIDLQKISGQNGT-FKKSTVLQLGIRMLDVLEYIHENEYVHGDIK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPS
:.::::.:::::::::.::::.:::::.: ::.:.:.:.. :.:::::::.:::.::: :
CCDS18 AANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALS
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE0 RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEI
::.:.:::::::..:: :.::::.::::: :. .: ... . . : : .. ::
CCDS18 RRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEI
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE0 AKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSV---------VENGGLK
:... .. : : ::: :. :. :: .: : . :. :..
CCDS18 AQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAA
290 300 310 320 330 340
360 370 380 390
pF1KE0 AKTITKKRKKEIEES--KEPGVED-TEWSNTQTE--------EAIQTRSRTRKRVQK
.: ..: ... ::.. .: ..:. . :. . : :: : .: :.. :.
CCDS18 TKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQE
350 360 370 380 390 400
CCDS18 PLNEVNSFPQKISYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESST
410 420 430 440 450 460
>>CCDS46292.1 VRK2 gene_id:7444|Hs108|chr2 (485 aa)
initn: 1157 init1: 729 opt: 1121 Z-score: 917.7 bits: 178.9 E(32554): 8.5e-45
Smith-Waterman score: 1132; 48.4% identity (72.3% similar) in 386 aa overlap (32-396:1-382)
10 20 30 40 50 60
pF1KE0 PRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLA-DMNSSE
: ..: .: ::.:::: :::: :. :
CCDS46 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPE
10 20 30
70 80 90 100 110 120
pF1KE0 SVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD
. :: ::::: ..:::::.:::::::.:: . :.:::. ..: :::.: ..:::: .
CCDS46 K---DARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE
40 50 60 70 80
130 140 150 160 170 180
pF1KE0 KNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA
.:.:::::.:.:.: ::::: :. :...:::::..:.::.::::::.:::::::::
CCDS46 FKGRSYRFMVMERLGIDLQKISGQNGT-FKKSTVLQLGIRMLDVLEYIHENEYVHGDIKA
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE0 SNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSR
.::::.:::::::::.::::.:::::.: ::.:.:.:.. :.:::::::.:::.::: ::
CCDS46 ANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSR
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE0 RGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIA
:.:.:::::::..:: :.::::.::::: :. .: ... . . : : .. :::
CCDS46 RSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIA
210 220 230 240 250 260
310 320 330 340 350
pF1KE0 KYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSV---------VENGGLKA
... .. : : ::: :. :. :: .: : . :. :.. .
CCDS46 QFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAAT
270 280 290 300 310 320
360 370 380 390
pF1KE0 KTITKKRKKEIEES--KEPGVED-TEWSNTQTE--------EAIQTRSRTRKRVQK
: ..: ... ::.. .: ..:. . :. . : :: : .: :.. :.
CCDS46 KQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEP
330 340 350 360 370 380
CCDS46 LNEVNSFPQKISYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTG
390 400 410 420 430 440
>>CCDS33076.1 VRK3 gene_id:51231|Hs108|chr19 (424 aa)
initn: 659 init1: 502 opt: 733 Z-score: 607.2 bits: 121.3 E(32554): 1.7e-27
Smith-Waterman score: 733; 36.2% identity (65.3% similar) in 334 aa overlap (5-329:85-411)
10 20 30
pF1KE0 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAK
.. :. ..: . : : . .: ..:: .
CCDS33 PKSSPQKTRKSPQVTRGSPQKTSCSPQKTRQSPQTLKRSRVTTSL-EALPTGTVLTDKSG
60 70 80 90 100 110
40 50 60 70 80 90
pF1KE0 KEWKVGLPIGQGGFGCIYLADMNSSESVGSDAP---CVVKVEPSDNGPLFTELKFYQRAA
..::. . . : .: : .:. . : .:.. .: : ::.: .:.::::
CCDS33 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-GRLFNEQNFFQRAA
120 130 140 150 160 170
100 110 120 130 140
pF1KE0 KPEQIQKWIRTRKLKYLGVPKYWGSGLH-DKNGKSYRFMIMDRFGSDLQKIYEANAKR-F
:: :..:: . . :..: : :.: :: :::... .: .::. ... :. .
CCDS33 KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDK----YRFLVLPSLGRSLQSALDVSPKHVL
180 190 200 210 220
150 160 170 180 190 200
pF1KE0 SRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGV
:...:::.. :.:: ::..::.:::::.. : :.... .. .:: :. ::.:.:::: :
CCDS33 SERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK
230 240 250 260 270 280
210 220 230 240 250 260
pF1KE0 HKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK
: : : . :.: .:: :.: :.: .::::.::. :::::..:: : ::: . : . .
CCDS33 HVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE
290 300 310 320 330 340
270 280 290 300 310 320
pF1KE0 YVRDSKIRYRENIASLMDKCFPEKNKPGE-IAKYMETVKLLDYTEKPLYENLRD---ILL
. .: .. .. . .. : . .:.: . ::...: : : ::: : ::. ::
CCDS33 DIMKQKQKFVDKPGPFVGPC-GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL
350 360 370 380 390 400
330 340 350 360 370 380
pF1KE0 QGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKKEIEESKEPGVEDTEWSNTQTEEAIQ
: :.
CCDS33 QDLRVSPYDPIGLPMVP
410 420
>>CCDS12791.1 VRK3 gene_id:51231|Hs108|chr19 (474 aa)
initn: 659 init1: 502 opt: 733 Z-score: 606.5 bits: 121.3 E(32554): 1.8e-27
Smith-Waterman score: 733; 36.2% identity (65.3% similar) in 334 aa overlap (5-329:135-461)
10 20 30
pF1KE0 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAK
.. :. ..: . : : . .: ..:: .
CCDS12 PKSSPQKTRKSPQVTRGSPQKTSCSPQKTRQSPQTLKRSRVTTSL-EALPTGTVLTDKSG
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE0 KEWKVGLPIGQGGFGCIYLADMNSSESVGSDAP---CVVKVEPSDNGPLFTELKFYQRAA
..::. . . : .: : .:. . : .:.. .: : ::.: .:.::::
CCDS12 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-GRLFNEQNFFQRAA
170 180 190 200 210 220
100 110 120 130 140
pF1KE0 KPEQIQKWIRTRKLKYLGVPKYWGSGLH-DKNGKSYRFMIMDRFGSDLQKIYEANAKR-F
:: :..:: . . :..: : :.: :: :::... .: .::. ... :. .
CCDS12 KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDK----YRFLVLPSLGRSLQSALDVSPKHVL
230 240 250 260 270
150 160 170 180 190 200
pF1KE0 SRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGV
:...:::.. :.:: ::..::.:::::.. : :.... .. .:: :. ::.:.:::: :
CCDS12 SERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK
280 290 300 310 320 330
210 220 230 240 250 260
pF1KE0 HKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK
: : : . :.: .:: :.: :.: .::::.::. :::::..:: : ::: . : . .
CCDS12 HVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE
340 350 360 370 380 390
270 280 290 300 310 320
pF1KE0 YVRDSKIRYRENIASLMDKCFPEKNKPGE-IAKYMETVKLLDYTEKPLYENLRD---ILL
. .: .. .. . .. : . .:.: . ::...: : : ::: : ::. ::
CCDS12 DIMKQKQKFVDKPGPFVGPC-GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL
400 410 420 430 440 450
330 340 350 360 370 380
pF1KE0 QGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKKEIEESKEPGVEDTEWSNTQTEEAIQ
: :.
CCDS12 QDLRVSPYDPIGLPMVP
460 470
>>CCDS77334.1 VRK3 gene_id:51231|Hs108|chr19 (412 aa)
initn: 596 init1: 439 opt: 659 Z-score: 548.0 bits: 110.3 E(32554): 3.3e-24
Smith-Waterman score: 659; 37.3% identity (66.7% similar) in 276 aa overlap (5-275:135-404)
10 20 30
pF1KE0 MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAK
.. :. ..: . : : . .: ..:: .
CCDS77 PKSSPQKTRKSPQVTRGSPQKTSCSPQKTRQSPQTLKRSRVTTSL-EALPTGTVLTDKSG
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE0 KEWKVGLPIGQGGFGCIYLADMNSSESVGSDAP---CVVKVEPSDNGPLFTELKFYQRAA
..::. . . : .: : .:. . : .:.. .: : ::.: .:.::::
CCDS77 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-GRLFNEQNFFQRAA
170 180 190 200 210 220
100 110 120 130 140
pF1KE0 KPEQIQKWIRTRKLKYLGVPKYWGSGLH-DKNGKSYRFMIMDRFGSDLQKIYEANAKR-F
:: :..:: . . :..: : :.: :: :::... .: .::. ... :. .
CCDS77 KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDK----YRFLVLPSLGRSLQSALDVSPKHVL
230 240 250 260 270
150 160 170 180 190 200
pF1KE0 SRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGV
:...:::.. :.:: ::..::.:::::.. : :.... .. .:: :. ::.:.:::: :
CCDS77 SERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK
280 290 300 310 320 330
210 220 230 240 250 260
pF1KE0 HKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK
: : : . :.: .:: :.: :.: .::::.::. :::::..:: : ::: . : . .
CCDS77 HVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE
340 350 360 370 380 390
270 280 290 300 310 320
pF1KE0 YVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK
. .:
CCDS77 DIMKQKQKLPWDSF
400 410
>>CCDS11806.1 CSNK1D gene_id:1453|Hs108|chr17 (409 aa)
initn: 331 init1: 188 opt: 427 Z-score: 361.9 bits: 75.8 E(32554): 7.7e-14
Smith-Waterman score: 471; 29.6% identity (59.3% similar) in 334 aa overlap (37-364:9-313)
10 20 30 40 50 60
pF1KE0 AQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLA-DMNSSESVGSD
...: ::.:.:: :::. :. ..: :.
CCDS11 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK
10 20 30
70 80 90 100 110 120
pF1KE0 APCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY-WGSGLHDKNGK
:: .:. : : :.:. ..: . :.: : .. :
CCDS11 LECVKTKHPQ----LHIESKIYK------MMQGGV--------GIPTIRWCGAEGD----
40 50 60 70
130 140 150 160 170 180
pF1KE0 SYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLL
: :.:. .: .:. ... ...:: :::: :. .... .:::: ....: :.: .:.:
CCDS11 -YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL
80 90 100 110 120 130
190 200 210 220 230 240
pF1KE0 LNY-KNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGD
.. :. . ::..:.::: .: .:.. .. :: ...::..: :. ::: :
CCDS11 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE0 LEILGYCMIQWLTGHLPWED---NLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIA
:: ::: .. . : :::. : :: : :. .. : : : :. :.:.:
CCDS11 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL---C---KGYPSEFA
200 210 220 230 240
310 320 330 340 350 360
pF1KE0 KYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKK
:.. . : . .:: : ::... . .. : . : .: .... :. .: ......
CCDS11 TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERR
250 260 270 280 290 300
370 380 390
pF1KE0 EIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK
. ::
CCDS11 DREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKV
310 320 330 340 350 360
>>CCDS11805.1 CSNK1D gene_id:1453|Hs108|chr17 (415 aa)
initn: 331 init1: 188 opt: 427 Z-score: 361.8 bits: 75.9 E(32554): 7.8e-14
Smith-Waterman score: 471; 29.6% identity (59.3% similar) in 334 aa overlap (37-364:9-313)
10 20 30 40 50 60
pF1KE0 AQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLA-DMNSSESVGSD
...: ::.:.:: :::. :. ..: :.
CCDS11 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK
10 20 30
70 80 90 100 110 120
pF1KE0 APCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY-WGSGLHDKNGK
:: .:. : : :.:. ..: . :.: : .. :
CCDS11 LECVKTKHPQ----LHIESKIYK------MMQGGV--------GIPTIRWCGAEGD----
40 50 60 70
130 140 150 160 170 180
pF1KE0 SYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLL
: :.:. .: .:. ... ...:: :::: :. .... .:::: ....: :.: .:.:
CCDS11 -YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFL
80 90 100 110 120 130
190 200 210 220 230 240
pF1KE0 LNY-KNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGD
.. :. . ::..:.::: .: .:.. .. :: ...::..: :. ::: :
CCDS11 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD
140 150 160 170 180 190
250 260 270 280 290 300
pF1KE0 LEILGYCMIQWLTGHLPWED---NLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIA
:: ::: .. . : :::. : :: : :. .. : : : :. :.:.:
CCDS11 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL---C---KGYPSEFA
200 210 220 230 240
310 320 330 340 350 360
pF1KE0 KYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKK
:.. . : . .:: : ::... . .. : . : .: .... :. .: ......
CCDS11 TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERR
250 260 270 280 290 300
370 380 390
pF1KE0 EIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK
. ::
CCDS11 DREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKV
310 320 330 340 350 360
>>CCDS13970.1 CSNK1E gene_id:1454|Hs108|chr22 (416 aa)
initn: 339 init1: 188 opt: 419 Z-score: 355.4 bits: 74.7 E(32554): 1.8e-13
Smith-Waterman score: 476; 29.4% identity (59.1% similar) in 340 aa overlap (36-369:8-318)
10 20 30 40 50 60
pF1KE0 AAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYL-ADMNSSESVGS
....: ::.:.:: ::: :.. :.: :.
CCDS13 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAI
10 20 30
70 80 90 100 110 120
pF1KE0 DAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY-WGSGLHDKNG
:: .:. : : :::. ..: . :.:. : .. :
CCDS13 KLECVKTKHPQ----LHIESKFYK------MMQGGV--------GIPSIKWCGAEGD---
40 50 60 70
130 140 150 160 170 180
pF1KE0 KSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNL
: :.:. .: .:. ... ...:: :::: :. .... .:::: ....: :.: .:.
CCDS13 --YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNF
80 90 100 110 120 130
190 200 210 220 230 240
pF1KE0 LLNY-KNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRG
:.. :. . ::..:.::: .: .:.. .. :: ...::..: :. :::
CCDS13 LMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRD
140 150 160 170 180 190
250 260 270 280 290
pF1KE0 DLEILGYCMIQWLTGHLPWED---NLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEI
::: ::: .. . : :::. : :: : :. .. : : : :. :.:.
CCDS13 DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL---C---KGYPSEF
200 210 220 230 240
300 310 320 330 340 350
pF1KE0 AKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRK
. :.. . : . .:: : ::... . .. : . : .: .... :. . . ...
CCDS13 STYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARNPEDVDRER
250 260 270 280 290 300
360 370 380 390
pF1KE0 KEIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK
.: :. .. :
CCDS13 REHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTPASRIQPAGNTSPRAIS
310 320 330 340 350 360
396 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 17:56:47 2016 done: Wed Nov 2 17:56:47 2016
Total Scan time: 2.500 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]