Result of FASTA (ccds) for
pF1KE0699
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0699, 4563 aa
1>>>pF1KE0699 4563 - 4563 aa - 4563 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6410+/-0.00178; mu= 21.8817+/- 0.107
mean_var=79.2445+/-16.220, 0's: 0 Z-trim(95.2): 60 B-trim: 6 in 1/48
Lambda= 0.144075
statistics sampled from 4344 (4357) to 4344 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.421), E-opt: 0.2 (0.134), width: 16
Scan time: 13.100
The best scores are: opt bits E(32554)
CCDS1703.1 APOB gene_id:338|Hs108|chr2 (4563) 29312 6104.6 0
>>CCDS1703.1 APOB gene_id:338|Hs108|chr2 (4563 aa)
initn: 29312 init1: 29312 opt: 29312 Z-score: 32905.9 bits: 6104.6 E(32554): 0
Smith-Waterman score: 29312; 99.9% identity (100.0% similar) in 4563 aa overlap (1-4563:1-4563)
10 20 30 40 50 60
pF1KE0 MDPPRPALLALLALPALLLLLLAGARAEEEMLENVSLVCPKDATRFKHLRKYTYNYEAES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MDPPRPALLALLALPALLLLLLAGARAEEEMLENVSLVCPKDATRFKHLRKYTYNYEAES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGVPGTADSRSATRINCKVELEVPQLCSFILKTSQCILKEVYGFNPEGKALLKKTKNSE
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
CCDS17 SSGVPGTADSRSATRINCKVELEVPQLCSFILKTSQCTLKEVYGFNPEGKALLKKTKNSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EFAAAMSRYELKLAIPEGKQVFLYPEKDEPTYILNIKRGIISALLVPPETEEAKQVLFLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EFAAAMSRYELKLAIPEGKQVFLYPEKDEPTYILNIKRGIISALLVPPETEEAKQVLFLD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TVYGNCSTHFTVKTRKGNVATEISTERDLGQCDRFKPIRTGISPLALIKGMTRPLSTLIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 TVYGNCSTHFTVKTRKGNVATEISTERDLGQCDRFKPIRTGISPLALIKGMTRPLSTLIS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SSQSCQYTLDAKRKHVAEAICKEQHLFLPFSYKNKYGMVAQVTQTLKLEDTPKINSRFFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SSQSCQYTLDAKRKHVAEAICKEQHLFLPFSYKNKYGMVAQVTQTLKLEDTPKINSRFFG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 EGTKKMGLAFESTKSTSPPKQAEAVLKTLQELKKLTISEQNIQRANLFNKLVTELRGLSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EGTKKMGLAFESTKSTSPPKQAEAVLKTLQELKKLTISEQNIQRANLFNKLVTELRGLSD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 EAVTSLLPQLIEVSSPITLQALVQCGQPQCSTHILQWLKRVHANPLLIDVVTYLVALIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EAVTSLLPQLIEVSSPITLQALVQCGQPQCSTHILQWLKRVHANPLLIDVVTYLVALIPE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 PSAQQLREIFNMARDQRSRATLYALSHAVNNYHKTNPTGTQELLDIANYLMEQIQDDCTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 PSAQQLREIFNMARDQRSRATLYALSHAVNNYHKTNPTGTQELLDIANYLMEQIQDDCTG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE0 DEDYTYLILRVIGNMGQTMEQLTPELKSSILKCVQSTKPSLMIQKAAIQALRKMEPKDKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DEDYTYLILRVIGNMGQTMEQLTPELKSSILKCVQSTKPSLMIQKAAIQALRKMEPKDKD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE0 QEVLLQTFLDDASPGDKRLAAYLMLMRSPSQADINKIVQILPWEQNEQVKNFVASHIANI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 QEVLLQTFLDDASPGDKRLAAYLMLMRSPSQADINKIVQILPWEQNEQVKNFVASHIANI
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE0 LNSEELDIQDLKKLVKEALKESQLPTVMDFRKFSRNYQLYKSVSLPSLDPASAKIEGNLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LNSEELDIQDLKKLVKEALKESQLPTVMDFRKFSRNYQLYKSVSLPSLDPASAKIEGNLI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE0 FDPNNYLPKESMLKTTLTAFGFASADLIEIGLEGKGFEPTLEALFGKQGFFPDSVNKALY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 FDPNNYLPKESMLKTTLTAFGFASADLIEIGLEGKGFEPTLEALFGKQGFFPDSVNKALY
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE0 WVNGQVPDGVSKVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARAYLRIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 WVNGQVPDGVSKVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARAYLRIL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE0 GEELGFASLHDLQLLGKLLLMGARTLQGIPQMIGEVIRKGSKNDFFLHYIFMENAFELPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 GEELGFASLHDLQLLGKLLLMGARTLQGIPQMIGEVIRKGSKNDFFLHYIFMENAFELPT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE0 GAGLQLQISSSGVIAPGAKAGVKLEVANMQAELVAKPSVSVEFVTNMGIIIPDFARSGVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 GAGLQLQISSSGVIAPGAKAGVKLEVANMQAELVAKPSVSVEFVTNMGIIIPDFARSGVQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE0 MNTNFFHESGLEAHVALKAGKLKFIIPSPKRPVKLLSGGNTLHLVSTTKTEVIPPLIENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MNTNFFHESGLEAHVALKAGKLKFIIPSPKRPVKLLSGGNTLHLVSTTKTEVIPPLIENR
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE0 QSWSVCKQVFPGLNYCTSGAYSNASSTDSASYYPLTGDTRLELELRPTGEIEQYSVSATY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 QSWSVCKQVFPGLNYCTSGAYSNASSTDSASYYPLTGDTRLELELRPTGEIEQYSVSATY
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE0 ELQREDRALVDTLKFVTQAEGAKQTEATMTFKYNRQSMTLSSEVQIPDFDVDLGTILRVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 ELQREDRALVDTLKFVTQAEGAKQTEATMTFKYNRQSMTLSSEVQIPDFDVDLGTILRVN
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE0 DESTEGKTSYRLTLDIQNKKITEVALMGHLSCDTKEERKIKGVISIPRLQAEARSEILAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DESTEGKTSYRLTLDIQNKKITEVALMGHLSCDTKEERKIKGVISIPRLQAEARSEILAH
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE0 WSPAKLLLQMDSSATAYGSTVSKRVAWHYDEEKIEFEWNTGTNVDTKKMTSNFPVDLSDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 WSPAKLLLQMDSSATAYGSTVSKRVAWHYDEEKIEFEWNTGTNVDTKKMTSNFPVDLSDY
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE0 PKSLHMYANRLLDHRVPQTDMTFRHVGSKLIVAMSSWLQKASGSLPYTQTLQDHLNSLKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 PKSLHMYANRLLDHRVPQTDMTFRHVGSKLIVAMSSWLQKASGSLPYTQTLQDHLNSLKE
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE0 FNLQNMGLPDFHIPENLFLKSDGRVKYTLNKNSLKIEIPLPFGGKSSRDLKMLETVRTPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 FNLQNMGLPDFHIPENLFLKSDGRVKYTLNKNSLKIEIPLPFGGKSSRDLKMLETVRTPA
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE0 LHFKSVGFHLPSREFQVPTFTIPKLYQLQVPLLGVLDLSTNVYSNLYNWSASYSGGNTST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LHFKSVGFHLPSREFQVPTFTIPKLYQLQVPLLGVLDLSTNVYSNLYNWSASYSGGNTST
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE0 DHFSLRARYHMKADSVVDLLSYNVQGSGETTYDHKNTFTLSCDGSLRHKFLDSNIKFSHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DHFSLRARYHMKADSVVDLLSYNVQGSGETTYDHKNTFTLSCDGSLRHKFLDSNIKFSHV
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE0 EKLGNNPVSKGLLIFDASSSWGPQMSASVHLDSKKKQHLFVKEVKIDGQFRVSSFYAKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EKLGNNPVSKGLLIFDASSSWGPQMSASVHLDSKKKQHLFVKEVKIDGQFRVSSFYAKGT
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE0 YGLSCQRDPNTGRLNGESNLRFNSSYLQGTNQITGRYEDGTLSLTSTSDLQSGIIKNTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 YGLSCQRDPNTGRLNGESNLRFNSSYLQGTNQITGRYEDGTLSLTSTSDLQSGIIKNTAS
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE0 LKYENYELTLKSDTNGKYKNFATSNKMDMTFSKQNALLRSEYQADYESLRFFSLLSGSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LKYENYELTLKSDTNGKYKNFATSNKMDMTFSKQNALLRSEYQADYESLRFFSLLSGSLN
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE0 SHGLELNADILGTDKINSGAHKATLRIGQDGISTSATTNLKCSLLVLENELNAELGLSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SHGLELNADILGTDKINSGAHKATLRIGQDGISTSATTNLKCSLLVLENELNAELGLSGA
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KE0 SMKLTTNGRFREHNAKFSLDGKAALTELSLGSAYQAMILGVDSKNIFNFKVSQEGLKLSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SMKLTTNGRFREHNAKFSLDGKAALTELSLGSAYQAMILGVDSKNIFNFKVSQEGLKLSN
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KE0 DMMGSYAEMKFDHTNSLNIAGLSLDFSSKLDNIYSSDKFYKQTVNLQLQPYSLVTTLNSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DMMGSYAEMKFDHTNSLNIAGLSLDFSSKLDNIYSSDKFYKQTVNLQLQPYSLVTTLNSD
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KE0 LKYNALDLTNNGKLRLEPLKLHVAGNLKGAYQNNEIKHIYAISSAALSASYKADTVAKVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LKYNALDLTNNGKLRLEPLKLHVAGNLKGAYQNNEIKHIYAISSAALSASYKADTVAKVQ
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KE0 GVEFSHRLNTDIAGLASAIDMSTNYNSDSLHFSNVFRSVMAPFTMTIDAHTNGNGKLALW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 GVEFSHRLNTDIAGLASAIDMSTNYNSDSLHFSNVFRSVMAPFTMTIDAHTNGNGKLALW
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KE0 GEHTGQLYSKFLLKAEPLAFTFSHDYKGSTSHHLVSRKSISAALEHKVSALLTPAEQTGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 GEHTGQLYSKFLLKAEPLAFTFSHDYKGSTSHHLVSRKSISAALEHKVSALLTPAEQTGT
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KE0 WKLKTQFNNNEYSQDLDAYNTKDKIGVELTGRTLADLTLLDSPIKVPLLLSEPINIIDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 WKLKTQFNNNEYSQDLDAYNTKDKIGVELTGRTLADLTLLDSPIKVPLLLSEPINIIDAL
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KE0 EMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EMRDAVEKPQEFTIVAFVKYDKNQDVHSINLPFFETLQEYFERNRQTIIVVLENVQRNLK
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KE0 HINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 HINIDQFVRKYRAALGKLPQQANDYLNSFNWERQVSHAKEKLTALTKKYRITENDIQIAL
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KE0 DDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHYHIRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DDAKINFNEKLSQLQTYMIQFDQYIKDSYDLHDLKIAIANIIDEIIEKLKSLDEHYHIRV
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KE0 NLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 NLVKTIHDLHLFIENIDFNKSGSSTASWIQNVDTKYQIRIQIQEKLQQLKRHIQNIDIQH
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KE0 LAGKLKQHIEAIDVRVLLDQLGTTISFERINDVLEHVKHFVINLIGDFEVAEKINAFRAK
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
CCDS17 LAGKLKQHIEAIDVRVLLDQLGTTISFERINDILEHVKHFVINLIGDFEVAEKINAFRAK
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KE0 VHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 VHELIERYEVDQQIQVLMDKLVELAHQYKLKETIQKLSNVLQQVKIKDYFEKLVGFIDDA
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440 2450 2460
pF1KE0 VKKLNELSFKTFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 VKKLNELSFKTFIEDVNKFLDMLIKKLKSFDYHQFVDETNDKIREVTQRLNGEIQALELP
2410 2420 2430 2440 2450 2460
2470 2480 2490 2500 2510 2520
pF1KE0 QKAEALKLFLEETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 QKAEALKLFLEETKATVAVYLESLQDTKITLIINWLQEALSSASLAHMKAKFRETLEDTR
2470 2480 2490 2500 2510 2520
2530 2540 2550 2560 2570 2580
pF1KE0 DRMYQMDIQQELQRYLSLVGQVYSTLVTYISDWWTLAAKNLTDFAEQYSIQDWAKRMKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DRMYQMDIQQELQRYLSLVGQVYSTLVTYISDWWTLAAKNLTDFAEQYSIQDWAKRMKAL
2530 2540 2550 2560 2570 2580
2590 2600 2610 2620 2630 2640
pF1KE0 VEQGFTVPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLTDLRIPSVQINFKDLKNIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 VEQGFTVPEIKTILGTMPAFEVSLQALQKATFQTPDFIVPLTDLRIPSVQINFKDLKNIK
2590 2600 2610 2620 2630 2640
2650 2660 2670 2680 2690 2700
pF1KE0 IPSRFSTPEFTILNTFHIPSFTIDFVEMKVKIIRTIDQMLNSELQWPVPDIYLRDLKVED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 IPSRFSTPEFTILNTFHIPSFTIDFVEMKVKIIRTIDQMLNSELQWPVPDIYLRDLKVED
2650 2660 2670 2680 2690 2700
2710 2720 2730 2740 2750 2760
pF1KE0 IPLARITLPDFRLPEIAIPEFIIPTLNLNDFQVPDLHIPEFQLPHISHTIEVPTFGKLYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 IPLARITLPDFRLPEIAIPEFIIPTLNLNDFQVPDLHIPEFQLPHISHTIEVPTFGKLYS
2710 2720 2730 2740 2750 2760
2770 2780 2790 2800 2810 2820
pF1KE0 ILKIQSPLFTLDANADIGNGTTSANEAGIAASITAKGESKLEVLNFDFQANAQLSNPKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 ILKIQSPLFTLDANADIGNGTTSANEAGIAASITAKGESKLEVLNFDFQANAQLSNPKIN
2770 2780 2790 2800 2810 2820
2830 2840 2850 2860 2870 2880
pF1KE0 PLALKESVKFSSKYLRTEHGSEMLFFGNAIEGKSNTVASLHTEKNTLELSNGVIVKINNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 PLALKESVKFSSKYLRTEHGSEMLFFGNAIEGKSNTVASLHTEKNTLELSNGVIVKINNQ
2830 2840 2850 2860 2870 2880
2890 2900 2910 2920 2930 2940
pF1KE0 LTLDSNTKYFHKLNIPKLDFSSQADLRNEIKTLLKAGHIAWTSSGKGSWKWACPRFSDEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LTLDSNTKYFHKLNIPKLDFSSQADLRNEIKTLLKAGHIAWTSSGKGSWKWACPRFSDEG
2890 2900 2910 2920 2930 2940
2950 2960 2970 2980 2990 3000
pF1KE0 THESQISFTIEGPLTSFGLSNKINSKHLRVNQNLVYESGSLNFSKLEIQSQVDSQHVGHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 THESQISFTIEGPLTSFGLSNKINSKHLRVNQNLVYESGSLNFSKLEIQSQVDSQHVGHS
2950 2960 2970 2980 2990 3000
3010 3020 3030 3040 3050 3060
pF1KE0 VLTAKGMALFGEGKAEFTGRHDAHLNGKVIGTLKNSLFFSAQPFEITASTNNEGNLKVRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 VLTAKGMALFGEGKAEFTGRHDAHLNGKVIGTLKNSLFFSAQPFEITASTNNEGNLKVRF
3010 3020 3030 3040 3050 3060
3070 3080 3090 3100 3110 3120
pF1KE0 PLRLTGKIDFLNNYALFLSPSAQQASWQVSARFNQYKYNQNFSAGNNENIMEAHVGINGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 PLRLTGKIDFLNNYALFLSPSAQQASWQVSARFNQYKYNQNFSAGNNENIMEAHVGINGE
3070 3080 3090 3100 3110 3120
3130 3140 3150 3160 3170 3180
pF1KE0 ANLDFLNIPLTIPEMRLPYTIITTPPLKDFSLWEKTGLKEFLKTTKQSFDLSVKAQYKKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 ANLDFLNIPLTIPEMRLPYTIITTPPLKDFSLWEKTGLKEFLKTTKQSFDLSVKAQYKKN
3130 3140 3150 3160 3170 3180
3190 3200 3210 3220 3230 3240
pF1KE0 KHRHSITNPLAVLCEFISQSIKSFDRHFEKNRNNALDFVTKSYNETKIKFDKYKAEKSHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 KHRHSITNPLAVLCEFISQSIKSFDRHFEKNRNNALDFVTKSYNETKIKFDKYKAEKSHD
3190 3200 3210 3220 3230 3240
3250 3260 3270 3280 3290 3300
pF1KE0 ELPRTFQIPGYTVPVVNVEVSPFTIEMSAFGYVFPKAVSMPSFSILGSDVRVPSYTLILP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 ELPRTFQIPGYTVPVVNVEVSPFTIEMSAFGYVFPKAVSMPSFSILGSDVRVPSYTLILP
3250 3260 3270 3280 3290 3300
3310 3320 3330 3340 3350 3360
pF1KE0 SLELPVLHVPRNLKLSLPDFKELCTISHIFIPAMGNITYDFSFKSSVITLNTNAELFNQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SLELPVLHVPRNLKLSLPDFKELCTISHIFIPAMGNITYDFSFKSSVITLNTNAELFNQS
3310 3320 3330 3340 3350 3360
3370 3380 3390 3400 3410 3420
pF1KE0 DIVAHLLSSSSSVIDALQYKLEGTTRLTRKRGLKLATALSLSNKFVEGSHNSTVSLTTKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DIVAHLLSSSSSVIDALQYKLEGTTRLTRKRGLKLATALSLSNKFVEGSHNSTVSLTTKN
3370 3380 3390 3400 3410 3420
3430 3440 3450 3460 3470 3480
pF1KE0 MEVSVATTTKAQIPILRMNFKQELNGNTKSKPTVSSSMEFKYDFNSSMLYSTAKGAVDHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MEVSVATTTKAQIPILRMNFKQELNGNTKSKPTVSSSMEFKYDFNSSMLYSTAKGAVDHK
3430 3440 3450 3460 3470 3480
3490 3500 3510 3520 3530 3540
pF1KE0 LSLESLTSYFSIESSTKGDVKGSVLSREYSGTIASEANTYLNSKSTRSSVKLQGTSKIDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LSLESLTSYFSIESSTKGDVKGSVLSREYSGTIASEANTYLNSKSTRSSVKLQGTSKIDD
3490 3500 3510 3520 3530 3540
3550 3560 3570 3580 3590 3600
pF1KE0 IWNLEVKENFAGEATLQRIYSLWEHSTKNHLQLEGLFFTNGEHTSKATLELSPWQMSALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 IWNLEVKENFAGEATLQRIYSLWEHSTKNHLQLEGLFFTNGEHTSKATLELSPWQMSALV
3550 3560 3570 3580 3590 3600
3610 3620 3630 3640 3650 3660
pF1KE0 QVHASQPSSFHDFPDLGQEVALNANTKNQKIRWKNEVRIHSGSFQSQVELSNDQEKAHLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 QVHASQPSSFHDFPDLGQEVALNANTKNQKIRWKNEVRIHSGSFQSQVELSNDQEKAHLD
3610 3620 3630 3640 3650 3660
3670 3680 3690 3700 3710 3720
pF1KE0 IAGSLEGHLRFLKNIILPVYDKSLWDFLKLDVTTSIGRRQHLRVSTAFVYTKNPNGYSFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 IAGSLEGHLRFLKNIILPVYDKSLWDFLKLDVTTSIGRRQHLRVSTAFVYTKNPNGYSFS
3670 3680 3690 3700 3710 3720
3730 3740 3750 3760 3770 3780
pF1KE0 IPVKVLADKFIIPGLKLNDLNSVLVMPTFHVPFTDLQVPSCKLDFREIQIYKKLRTSSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 IPVKVLADKFIIPGLKLNDLNSVLVMPTFHVPFTDLQVPSCKLDFREIQIYKKLRTSSFA
3730 3740 3750 3760 3770 3780
3790 3800 3810 3820 3830 3840
pF1KE0 LNLPTLPEVKFPEVDVLTKYSQPEDSLIPFFEITVPESQLTVSQFTLPKSVSDGIAALDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LNLPTLPEVKFPEVDVLTKYSQPEDSLIPFFEITVPESQLTVSQFTLPKSVSDGIAALDL
3790 3800 3810 3820 3830 3840
3850 3860 3870 3880 3890 3900
pF1KE0 NAVANKIADFELPTIIVPEQTIEIPSIKFSVPAGIVIPSFQALTARFEVDSPVYNATWSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 NAVANKIADFELPTIIVPEQTIEIPSIKFSVPAGIVIPSFQALTARFEVDSPVYNATWSA
3850 3860 3870 3880 3890 3900
3910 3920 3930 3940 3950 3960
pF1KE0 SLKNKADYVETVLDSTCSSTVQFLEYELNVLGTHKIEDGTLASKTKGTFAHRDFSAEYEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 SLKNKADYVETVLDSTCSSTVQFLEYELNVLGTHKIEDGTLASKTKGTFAHRDFSAEYEE
3910 3920 3930 3940 3950 3960
3970 3980 3990 4000 4010 4020
pF1KE0 DGKYEGLQEWEGKAHLNIKSPAFTDLHLRYQKDKKGISTSAASPAVGTVGMDMDEDDDFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DGKYEGLQEWEGKAHLNIKSPAFTDLHLRYQKDKKGISTSAASPAVGTVGMDMDEDDDFS
3970 3980 3990 4000 4010 4020
4030 4040 4050 4060 4070 4080
pF1KE0 KWNFYYSPQSSPDKKLTIFKTELRVRESDEETQIKVNWEEEAASGLLTSLKDNVPKATGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 KWNFYYSPQSSPDKKLTIFKTELRVRESDEETQIKVNWEEEAASGLLTSLKDNVPKATGV
4030 4040 4050 4060 4070 4080
4090 4100 4110 4120 4130 4140
pF1KE0 LYDYVNKYHWEHTGLTLREVSSKLRRNLQNNAEWVYQGAIRQIDDIDVRFQKAASGTTGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 LYDYVNKYHWEHTGLTLREVSSKLRRNLQNNAEWVYQGAIRQIDDIDVRFQKAASGTTGT
4090 4100 4110 4120 4130 4140
4150 4160 4170 4180 4190 4200
pF1KE0 YQEWKDKAQNLYQELLTQEGQASFQGLKDNVFDGLVRVTQEFHMKVKHLIDSLIDFLNFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 YQEWKDKAQNLYQELLTQEGQASFQGLKDNVFDGLVRVTQEFHMKVKHLIDSLIDFLNFP
4150 4160 4170 4180 4190 4200
4210 4220 4230 4240 4250 4260
pF1KE0 RFQFPGKPGIYTREELCTMFIREVGTVLSQVYSKVHNGSEILFSYFQDLVITLPFELRKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 RFQFPGKPGIYTREELCTMFIREVGTVLSQVYSKVHNGSEILFSYFQDLVITLPFELRKH
4210 4220 4230 4240 4250 4260
4270 4280 4290 4300 4310 4320
pF1KE0 KLIDVISMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQLIEDNIKQLKEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 KLIDVISMYRELLKDLSKEAQEVFKAIQSLKTTEVLRNLQDLLQFIFQLIEDNIKQLKEM
4270 4280 4290 4300 4310 4320
4330 4340 4350 4360 4370 4380
pF1KE0 KFTYLINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIHQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 KFTYLINYIQDEINTIFSDYIPYVFKLLKENLCLNLHKFNEFIQNELQEASQELQQIHQY
4330 4340 4350 4360 4370 4380
4390 4400 4410 4420 4430 4440
pF1KE0 IMALREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTSQLSSQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 IMALREEYFDPSIVGWTVKYYELEEKIVSLIKNLLVALKDFHSEYIVSASNFTSQLSSQV
4390 4400 4410 4420 4430 4440
4450 4460 4470 4480 4490 4500
pF1KE0 EQFLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQTIATKKIISDYHQQFRYKLQ
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS17 EQFLHRNIQEYLSILTDPDGKGKEKIAELSATAQEIIKSQAIATKKIISDYHQQFRYKLQ
4450 4460 4470 4480 4490 4500
4510 4520 4530 4540 4550 4560
pF1KE0 DFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITELLKKLQSTTVMNPYMKLAPGELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 DFSDQLSDYYEKFIAESKRLIDLSIQNYHTFLIYITELLKKLQSTTVMNPYMKLAPGELT
4510 4520 4530 4540 4550 4560
pF1KE0 IIL
:::
CCDS17 IIL
4563 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 20:02:34 2016 done: Sun Nov 6 20:02:37 2016
Total Scan time: 13.100 Total Display time: 1.160
Function used was FASTA [36.3.4 Apr, 2011]