Result of FASTA (omim) for
pF1KE0753
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0753, 338 aa
1>>>pF1KE0753 338 - 338 aa - 338 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.1867+/-0.000793; mu= -11.5483+/- 0.047
mean_var=768.1111+/-182.583, 0's: 0 Z-trim(112.8): 367 B-trim: 424 in 1/53
Lambda= 0.046277
statistics sampled from 21610 (21917) to 21610 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.609), E-opt: 0.2 (0.257), width: 16
Scan time: 7.560
The best scores are: opt bits E(85289)
NP_001171668 (OMIM: 610711) testis-specific serine ( 338) 2246 166.0 1.1e-40
XP_011534965 (OMIM: 610711) PREDICTED: testis-spec ( 262) 1758 133.2 6e-31
NP_001294996 (OMIM: 610711) testis-specific serine ( 252) 1238 98.5 1.7e-20
NP_777604 (OMIM: 610711) testis-specific serine/th ( 328) 1238 98.6 1.9e-20
XP_016876715 (OMIM: 610711) PREDICTED: testis-spec ( 291) 969 80.6 4.6e-15
>>NP_001171668 (OMIM: 610711) testis-specific serine/thr (338 aa)
initn: 2246 init1: 2246 opt: 2246 Z-score: 851.7 bits: 166.0 E(85289): 1.1e-40
Smith-Waterman score: 2246; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338)
10 20 30 40 50 60
pF1KE0 MGKGDVLEAAPTTTAYHSLMDEYGYEVGKAIGHGSYGSVYEAFYTKQKVMVAVKIISKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKGDVLEAAPTTTAYHSLMDEYGYEVGKAIGHGSYGSVYEAFYTKQKVMVAVKIISKKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQGGDVLEWIQRYGAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQGGDVLEWIQRYGAC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SEPLAGKWFSQLTLGIAYLHSKSIVHRLMPSLSAAGRDLKLENLLLDKWENVKISDFGFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEPLAGKWFSQLTLGIAYLHSKSIVHRLMPSLSAAGRDLKLENLLLDKWENVKISDFGFA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 KMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 TLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLRQATKRATILDIIKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLRQATKRATILDIIKD
250 260 270 280 290 300
310 320 330
pF1KE0 SWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
::::::::::::::::::::::::::::::::::::::
NP_001 SWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
310 320 330
>>XP_011534965 (OMIM: 610711) PREDICTED: testis-specific (262 aa)
initn: 1758 init1: 1758 opt: 1758 Z-score: 676.6 bits: 133.2 E(85289): 6e-31
Smith-Waterman score: 1758; 100.0% identity (100.0% similar) in 262 aa overlap (77-338:1-262)
50 60 70 80 90 100
pF1KE0 QKVMVAVKIISKKKASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQ
::::::::::::::::::::::::::::::
XP_011 MKVLRHKYLINFYRAIESTSRVYIILELAQ
10 20 30
110 120 130 140 150 160
pF1KE0 GGDVLEWIQRYGACSEPLAGKWFSQLTLGIAYLHSKSIVHRLMPSLSAAGRDLKLENLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGDVLEWIQRYGACSEPLAGKWFSQLTLGIAYLHSKSIVHRLMPSLSAAGRDLKLENLLL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE0 DKWENVKISDFGFAKMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DKWENVKISDFGFAKMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYN
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE0 PFLSDTWSMGVILYTLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFLSDTWSMGVILYTLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLR
160 170 180 190 200 210
290 300 310 320 330
pF1KE0 QATKRATILDIIKDSWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QATKRATILDIIKDSWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
220 230 240 250 260
>>NP_001294996 (OMIM: 610711) testis-specific serine/thr (252 aa)
initn: 1238 init1: 1238 opt: 1238 Z-score: 489.1 bits: 98.5 E(85289): 1.7e-20
Smith-Waterman score: 1666; 96.2% identity (96.2% similar) in 262 aa overlap (77-338:1-252)
50 60 70 80 90 100
pF1KE0 QKVMVAVKIISKKKASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQ
::::::::::::::::::::::::::::::
NP_001 MKVLRHKYLINFYRAIESTSRVYIILELAQ
10 20 30
110 120 130 140 150 160
pF1KE0 GGDVLEWIQRYGACSEPLAGKWFSQLTLGIAYLHSKSIVHRLMPSLSAAGRDLKLENLLL
::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_001 GGDVLEWIQRYGACSEPLAGKWFSQLTLGIAYLHSKSIVHR----------DLKLENLLL
40 50 60 70 80
170 180 190 200 210 220
pF1KE0 DKWENVKISDFGFAKMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKWENVKISDFGFAKMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYN
90 100 110 120 130 140
230 240 250 260 270 280
pF1KE0 PFLSDTWSMGVILYTLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFLSDTWSMGVILYTLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLR
150 160 170 180 190 200
290 300 310 320 330
pF1KE0 QATKRATILDIIKDSWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QATKRATILDIIKDSWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
210 220 230 240 250
>>NP_777604 (OMIM: 610711) testis-specific serine/threon (328 aa)
initn: 1238 init1: 1238 opt: 1238 Z-score: 488.1 bits: 98.6 E(85289): 1.9e-20
Smith-Waterman score: 2154; 97.0% identity (97.0% similar) in 338 aa overlap (1-338:1-328)
10 20 30 40 50 60
pF1KE0 MGKGDVLEAAPTTTAYHSLMDEYGYEVGKAIGHGSYGSVYEAFYTKQKVMVAVKIISKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 MGKGDVLEAAPTTTAYHSLMDEYGYEVGKAIGHGSYGSVYEAFYTKQKVMVAVKIISKKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQGGDVLEWIQRYGAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 ASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQGGDVLEWIQRYGAC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SEPLAGKWFSQLTLGIAYLHSKSIVHRLMPSLSAAGRDLKLENLLLDKWENVKISDFGFA
::::::::::::::::::::::::::: :::::::::::::::::::::::
NP_777 SEPLAGKWFSQLTLGIAYLHSKSIVHR----------DLKLENLLLDKWENVKISDFGFA
130 140 150 160 170
190 200 210 220 230 240
pF1KE0 KMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 KMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILY
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 TLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLRQATKRATILDIIKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_777 TLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLRQATKRATILDIIKD
240 250 260 270 280 290
310 320 330
pF1KE0 SWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
::::::::::::::::::::::::::::::::::::::
NP_777 SWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
300 310 320
>>XP_016876715 (OMIM: 610711) PREDICTED: testis-specific (291 aa)
initn: 958 init1: 958 opt: 969 Z-score: 391.5 bits: 80.6 E(85289): 4.6e-15
Smith-Waterman score: 1767; 95.4% identity (95.7% similar) in 282 aa overlap (1-282:1-272)
10 20 30 40 50 60
pF1KE0 MGKGDVLEAAPTTTAYHSLMDEYGYEVGKAIGHGSYGSVYEAFYTKQKVMVAVKIISKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGKGDVLEAAPTTTAYHSLMDEYGYEVGKAIGHGSYGSVYEAFYTKQKVMVAVKIISKKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQGGDVLEWIQRYGAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASDDYLNKFLPREIQVMKVLRHKYLINFYRAIESTSRVYIILELAQGGDVLEWIQRYGAC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SEPLAGKWFSQLTLGIAYLHSKSIVHRLMPSLSAAGRDLKLENLLLDKWENVKISDFGFA
::::::::::::::::::::::::::: :::::::::::::::::::::::
XP_016 SEPLAGKWFSQLTLGIAYLHSKSIVHR----------DLKLENLLLDKWENVKISDFGFA
130 140 150 160 170
190 200 210 220 230 240
pF1KE0 KMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KMVPSNQPVGCSPSYRQVNCFSHLSQTYCGSFAYACPEILRGLPYNPFLSDTWSMGVILY
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 TLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKNLILQMLRQATKRATILDIIKD
:::::::::::::::::::::::::::::::::::::: .:
XP_016 TLVVAHLPFDDTNLKKLLRETQKEVTFPANHTISQECKVQLLIACVAQWRKTQARPLSPL
240 250 260 270 280 290
310 320 330
pF1KE0 SWVLKFQPEQPTHEIRLLEAMCQLHNTTKQHQSLQITT
XP_016 L
338 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:30:11 2016 done: Sat Nov 5 18:30:12 2016
Total Scan time: 7.560 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]