Result of FASTA (omim) for
pF1KE0783
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0783, 352 aa
1>>>pF1KE0783 352 - 352 aa - 352 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8085+/-0.000297; mu= 5.2689+/- 0.019
mean_var=165.4885+/-35.765, 0's: 0 Z-trim(121.8): 116 B-trim: 2104 in 1/54
Lambda= 0.099699
statistics sampled from 38699 (38849) to 38699 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.455), width: 16
Scan time: 8.970
The best scores are: opt bits E(85289)
NP_116244 (OMIM: 608349) hematopoietic SH2 domain- ( 352) 2423 360.1 4.3e-99
NP_001278203 (OMIM: 608349) hematopoietic SH2 doma ( 295) 1927 288.7 1.1e-77
XP_011526691 (OMIM: 608349) PREDICTED: hematopoiet ( 272) 1858 278.7 1e-74
XP_011526689 (OMIM: 608349) PREDICTED: hematopoiet ( 325) 1348 205.4 1.4e-52
XP_011526690 (OMIM: 608349) PREDICTED: hematopoiet ( 325) 1348 205.4 1.4e-52
XP_011526688 (OMIM: 608349) PREDICTED: hematopoiet ( 405) 1348 205.5 1.7e-52
XP_011526692 (OMIM: 608349) PREDICTED: hematopoiet ( 187) 1090 168.1 1.4e-41
XP_016882892 (OMIM: 608349) PREDICTED: hematopoiet ( 218) 1089 168.0 1.7e-41
XP_016882891 (OMIM: 608349) PREDICTED: hematopoiet ( 225) 1089 168.0 1.8e-41
XP_016882893 (OMIM: 608349) PREDICTED: hematopoiet ( 176) 877 137.5 2.2e-32
NP_001154915 (OMIM: 604514) SH2 domain-containing ( 361) 344 61.0 4.6e-09
NP_001154914 (OMIM: 604514) SH2 domain-containing ( 371) 344 61.0 4.7e-09
XP_016858253 (OMIM: 604514) PREDICTED: SH2 domain- ( 385) 344 61.1 4.8e-09
NP_003966 (OMIM: 604514) SH2 domain-containing pro ( 389) 344 61.1 4.9e-09
NP_001154916 (OMIM: 604514) SH2 domain-containing ( 389) 344 61.1 4.9e-09
XP_006711678 (OMIM: 604514) PREDICTED: SH2 domain- ( 395) 344 61.1 4.9e-09
NP_001167631 (OMIM: 614968) SH2 domain-containing ( 409) 273 50.9 6e-06
XP_011542912 (OMIM: 614968) PREDICTED: SH2 domain- ( 427) 273 50.9 6.2e-06
XP_016869218 (OMIM: 614968) PREDICTED: SH2 domain- ( 427) 273 50.9 6.2e-06
NP_001167630 (OMIM: 614968) SH2 domain-containing ( 454) 273 50.9 6.5e-06
NP_071354 (OMIM: 614968) SH2 domain-containing pro ( 454) 273 50.9 6.5e-06
XP_016858255 (OMIM: 604514) PREDICTED: SH2 domain- ( 377) 255 48.2 3.4e-05
XP_016858254 (OMIM: 604514) PREDICTED: SH2 domain- ( 381) 255 48.2 3.4e-05
NP_001154913 (OMIM: 604514) SH2 domain-containing ( 399) 255 48.3 3.6e-05
XP_016858256 (OMIM: 604514) PREDICTED: SH2 domain- ( 309) 253 47.9 3.6e-05
XP_016858252 (OMIM: 604514) PREDICTED: SH2 domain- ( 401) 255 48.3 3.6e-05
XP_016858251 (OMIM: 604514) PREDICTED: SH2 domain- ( 405) 255 48.3 3.6e-05
>>NP_116244 (OMIM: 608349) hematopoietic SH2 domain-cont (352 aa)
initn: 2423 init1: 2423 opt: 2423 Z-score: 1900.0 bits: 360.1 E(85289): 4.3e-99
Smith-Waterman score: 2423; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352)
10 20 30 40 50 60
pF1KE0 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 ITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 ITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRST
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 VISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 VISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCI
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 EVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_116 EVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
310 320 330 340 350
>>NP_001278203 (OMIM: 608349) hematopoietic SH2 domain-c (295 aa)
initn: 1927 init1: 1927 opt: 1927 Z-score: 1515.5 bits: 288.7 E(85289): 1.1e-77
Smith-Waterman score: 1927; 99.6% identity (100.0% similar) in 281 aa overlap (72-352:15-295)
50 60 70 80 90 100
pF1KE0 EDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTS
.:::::::::::::::::::::::::::::
NP_001 MRGSRMSQPPQCLRRAQSSCCHFMVKLLDDGTFMIPGEKVAHTS
10 20 30 40
110 120 130 140 150 160
pF1KE0 LDALVTFHQQKPIEPRRELLTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDALVTFHQQKPIEPRRELLTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASP
50 60 70 80 90 100
170 180 190 200 210 220
pF1KE0 KPVLCHQSKERKPSAEMNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPVLCHQSKERKPSAEMNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQL
110 120 130 140 150 160
230 240 250 260 270 280
pF1KE0 KSHLATVNLSSLLDVRRSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSHLATVNLSSLLDVRRSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQ
170 180 190 200 210 220
290 300 310 320 330 340
pF1KE0 APKDRKVPTRKAERSVSCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APKDRKVPTRKAERSVSCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEY
230 240 250 260 270 280
350
pF1KE0 QQPPPFAPGYC
:::::::::::
NP_001 QQPPPFAPGYC
290
>>XP_011526691 (OMIM: 608349) PREDICTED: hematopoietic S (272 aa)
initn: 1858 init1: 1858 opt: 1858 Z-score: 1462.3 bits: 278.7 E(85289): 1e-74
Smith-Waterman score: 1858; 100.0% identity (100.0% similar) in 272 aa overlap (81-352:1-272)
60 70 80 90 100 110
pF1KE0 QPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQ
::::::::::::::::::::::::::::::
XP_011 MVKLLDDGTFMIPGEKVAHTSLDALVTFHQ
10 20 30
120 130 140 150 160 170
pF1KE0 QKPIEPRRELLTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QKPIEPRRELLTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSK
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 ERKPSAEMNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERKPSAEMNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNL
100 110 120 130 140 150
240 250 260 270 280 290
pF1KE0 SSLLDVRRSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSLLDVRRSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPT
160 170 180 190 200 210
300 310 320 330 340 350
pF1KE0 RKAERSVSCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKAERSVSCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPG
220 230 240 250 260 270
pF1KE0 YC
::
XP_011 YC
>>XP_011526689 (OMIM: 608349) PREDICTED: hematopoietic S (325 aa)
initn: 1633 init1: 1335 opt: 1348 Z-score: 1064.8 bits: 205.4 E(85289): 1.4e-52
Smith-Waterman score: 1559; 76.9% identity (81.2% similar) in 325 aa overlap (81-352:1-325)
60 70 80 90 100 110
pF1KE0 QPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQ
::::::::::::::::::::::::::::::
XP_011 MVKLLDDGTFMIPGEKVAHTSLDALVTFHQ
10 20 30
120 130 140
pF1KE0 QKPIEPRRELLTQPCRQ-------------------KDPA-----------NVDYEDLFL
::::::::::::::::. : :: .: . ..:
XP_011 QKPIEPRRELLTQPCRRIPQTWITRISSSTPTQWPRKLPARCLPLRSGLPKSVPQNPIYL
40 50 60 70 80 90
150 160 170
pF1KE0 Y---------SNAVAEE------------AACPVSAPE--EASPKPVLCHQSKERKPSAE
. :..:. : . :...: .:::::::::::::::::::
XP_011 WVYMLPGCLSSQTVSSERLETPSGLFAFASPTPLKGPAILKASPKPVLCHQSKERKPSAE
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE0 MNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVR
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE0 RSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE0 SCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
280 290 300 310 320
>>XP_011526690 (OMIM: 608349) PREDICTED: hematopoietic S (325 aa)
initn: 1633 init1: 1335 opt: 1348 Z-score: 1064.8 bits: 205.4 E(85289): 1.4e-52
Smith-Waterman score: 1559; 76.9% identity (81.2% similar) in 325 aa overlap (81-352:1-325)
60 70 80 90 100 110
pF1KE0 QPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQ
::::::::::::::::::::::::::::::
XP_011 MVKLLDDGTFMIPGEKVAHTSLDALVTFHQ
10 20 30
120 130 140
pF1KE0 QKPIEPRRELLTQPCRQ-------------------KDPA-----------NVDYEDLFL
::::::::::::::::. : :: .: . ..:
XP_011 QKPIEPRRELLTQPCRRIPQTWITRISSSTPTQWPRKLPARCLPLRSGLPKSVPQNPIYL
40 50 60 70 80 90
150 160 170
pF1KE0 Y---------SNAVAEE------------AACPVSAPE--EASPKPVLCHQSKERKPSAE
. :..:. : . :...: .:::::::::::::::::::
XP_011 WVYMLPGCLSSQTVSSERLETPSGLFAFASPTPLKGPAILKASPKPVLCHQSKERKPSAE
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE0 MNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNRITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVR
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE0 RSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSTVISGPGTGKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSV
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE0 SCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCIEVTPGDRSWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
280 290 300 310 320
>>XP_011526688 (OMIM: 608349) PREDICTED: hematopoietic S (405 aa)
initn: 2198 init1: 1335 opt: 1348 Z-score: 1063.5 bits: 205.5 E(85289): 1.7e-52
Smith-Waterman score: 1969; 80.5% identity (84.1% similar) in 384 aa overlap (22-352:22-405)
10 20 30 40 50 60
pF1KE0 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
:::::::::::::::::::::::::::::::::::::::
XP_011 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
70 80 90 100 110 120
130 140
pF1KE0 LTQPCRQ-------------------KDPA-----------NVDYEDLFLY---------
::::::. : :: .: . ..:.
XP_011 LTQPCRRIPQTWITRISSSTPTQWPRKLPARCLPLRSGLPKSVPQNPIYLWVYMLPGCLS
130 140 150 160 170 180
150 160 170 180
pF1KE0 SNAVAEE------------AACPVSAPE--EASPKPVLCHQSKERKPSAEMNRITTKEAT
:..:. : . :...: .:::::::::::::::::::::::::::::
XP_011 SQTVSSERLETPSGLFAFASPTPLKGPAILKASPKPVLCHQSKERKPSAEMNRITTKEAT
190 200 210 220 230 240
190 200 210 220 230 240
pF1KE0 SSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRSTVISGPGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRSTVISGPGT
250 260 270 280 290 300
250 260 270 280 290 300
pF1KE0 GKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCIEVTPGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKGSQDHSGDPTSGDRGYTDPCVATSLKSPSQPQAPKDRKVPTRKAERSVSCIEVTPGDR
310 320 330 340 350 360
310 320 330 340 350
pF1KE0 SWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWHQMVVRALSSQESKPEHQGLAEPENDQLPEEYQQPPPFAPGYC
370 380 390 400
>>XP_011526692 (OMIM: 608349) PREDICTED: hematopoietic S (187 aa)
initn: 1090 init1: 1090 opt: 1090 Z-score: 867.6 bits: 168.1 E(85289): 1.4e-41
Smith-Waterman score: 1090; 97.5% identity (98.8% similar) in 162 aa overlap (1-162:1-162)
10 20 30 40 50 60
pF1KE0 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
:::::::::::::::::::::::::::::::::::::: . .
XP_011 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEERTSQKCSSKSYLLMGLHAPWLP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 ITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRST
XP_011 FQSDCEL
>>XP_016882892 (OMIM: 608349) PREDICTED: hematopoietic S (218 aa)
initn: 1112 init1: 1089 opt: 1089 Z-score: 865.9 bits: 168.0 E(85289): 1.7e-41
Smith-Waterman score: 1089; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE0 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
::::::::::::::::::::::::::::::::::::::
XP_016 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEETESCFVDQAGVEWHSLGSLQPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 ITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRST
XP_016 PPRFKRFSCLSLLSSWDYRPPQSQSCVTNQRKGSRQQR
190 200 210
>>XP_016882891 (OMIM: 608349) PREDICTED: hematopoietic S (225 aa)
initn: 1112 init1: 1089 opt: 1089 Z-score: 865.7 bits: 168.0 E(85289): 1.8e-41
Smith-Waterman score: 1089; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158)
10 20 30 40 50 60
pF1KE0 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
::::::::::::::::::::::::::::::::::::::
XP_016 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEETESCFVDQAGVEWHSLGSLQPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 ITTKEATSSCPPKSPLGETRQKLWRSLKMLPERGQRVRQQLKSHLATVNLSSLLDVRRST
XP_016 PPRFKRFSCLSLLSSWDYRCVLIFVFLVETGFHHVGQTGLKPLTS
190 200 210 220
>>XP_016882893 (OMIM: 608349) PREDICTED: hematopoietic S (176 aa)
initn: 901 init1: 877 opt: 877 Z-score: 702.4 bits: 137.5 E(85289): 2.2e-32
Smith-Waterman score: 877; 99.2% identity (100.0% similar) in 127 aa overlap (1-127:1-127)
10 20 30 40 50 60
pF1KE0 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTEAGKLPLPLPPRLDWFVHTQMGQLAQDGVPEWFHGAISREDAENLLESQPLGSFLIRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPIEPRREL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LTQPCRQKDPANVDYEDLFLYSNAVAEEAACPVSAPEEASPKPVLCHQSKERKPSAEMNR
::::::.
XP_016 LTQPCRRIPQTWITRISSSTPTQWPRKLPARCLPLRRPPQSQSCVTNQRKGSRQQR
130 140 150 160 170
352 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:40:06 2016 done: Sat Nov 5 18:40:08 2016
Total Scan time: 8.970 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]