Result of FASTA (omim) for
pF1KE0834
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0834, 269 aa
1>>>pF1KE0834 269 - 269 aa - 269 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8826+/-0.000511; mu= 17.7346+/- 0.031
mean_var=84.2117+/-18.408, 0's: 0 Z-trim(107.9): 127 B-trim: 0 in 0/50
Lambda= 0.139762
statistics sampled from 15878 (15992) to 15878 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.532), E-opt: 0.2 (0.188), width: 16
Scan time: 5.970
The best scores are: opt bits E(85289)
NP_006628 (OMIM: 608496) olfactory receptor 5I1 [H ( 314) 962 204.3 2.2e-52
NP_003688 (OMIM: 608492) olfactory receptor 5F1 [H ( 314) 916 195.1 1.4e-49
NP_001004729 (OMIM: 615702) olfactory receptor 5AN ( 311) 886 189.0 9e-48
NP_036492 (OMIM: 603232) olfactory receptor 1F1 [H ( 312) 809 173.5 4.2e-43
XP_011520809 (OMIM: 603232) PREDICTED: olfactory r ( 312) 809 173.5 4.2e-43
XP_011520808 (OMIM: 603232) PREDICTED: olfactory r ( 322) 809 173.5 4.3e-43
NP_835462 (OMIM: 608493) olfactory receptor 10A5 [ ( 317) 788 169.3 8.1e-42
NP_003687 (OMIM: 608495) olfactory receptor 6A2 [H ( 327) 755 162.6 8.3e-40
NP_003691 (OMIM: 608494) olfactory receptor 2D2 [H ( 308) 744 160.4 3.7e-39
NP_009091 (OMIM: 600578) olfactory receptor 2H2 [H ( 312) 731 157.8 2.3e-38
NP_001005487 (OMIM: 611677) olfactory receptor 13G ( 307) 727 157.0 4e-38
NP_001005216 (OMIM: 615016,615082) olfactory recep ( 311) 722 156.0 8.1e-38
NP_001001957 (OMIM: 616729) olfactory receptor 2W3 ( 314) 722 156.0 8.1e-38
XP_011513214 (OMIM: 600578) PREDICTED: olfactory r ( 300) 720 155.5 1e-37
NP_001004703 (OMIM: 614273) olfactory receptor 4C4 ( 309) 715 154.5 2.1e-37
XP_011514321 (OMIM: 608497) PREDICTED: olfactory r ( 317) 715 154.5 2.2e-37
XP_011514322 (OMIM: 608497) PREDICTED: olfactory r ( 317) 715 154.5 2.2e-37
NP_036501 (OMIM: 608497) olfactory receptor 2F1 [H ( 317) 715 154.5 2.2e-37
NP_001005191 (OMIM: 611538) olfactory receptor 7D4 ( 312) 712 153.9 3.3e-37
NP_002539 (OMIM: 164342) olfactory receptor 1D2 [H ( 312) 698 151.1 2.3e-36
NP_689643 (OMIM: 611267) olfactory receptor 51E1 [ ( 318) 453 101.7 1.7e-21
NP_110401 (OMIM: 611268) olfactory receptor 51E2 [ ( 320) 414 93.9 4.1e-19
>>NP_006628 (OMIM: 608496) olfactory receptor 5I1 [Homo (314 aa)
initn: 997 init1: 956 opt: 962 Z-score: 1061.4 bits: 204.3 E(85289): 2.2e-52
Smith-Waterman score: 962; 53.4% identity (80.3% similar) in 264 aa overlap (1-264:47-310)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
...::::: .:.::::::::.::::: :.
NP_006 LGFPTRPELQIVLFLMFLTLYAIILIGNIGLMLLIRIDPHLQTPMYFFLSNLSFVDLCYF
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
: . ::::..:. . :.::. ::::: .:: :. .. :.: .:::: ::::::::::.:
NP_006 SDIVPKMLVNFLSENKSISYYGCALQFYFFCTFADTESFILAAMAYDRYVAICNPLLYTV
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
.::. .:..:.: :. : :....::. :: : .: :::: ::::. :::.: :.:: .
NP_006 VMSRGICMRLIVLSYLGGNMSSLVHTSFAFILKYCDKNVINHFFCDLPPLLKLSCTDTTI
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
:. . ...: .. . :.:::..::...:.::: .:: ::::::.::::.: : ::
NP_006 NEWLLSTYGSSVEIICFIIIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTSVTIYQGT
200 210 220 230 240 250
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
:.::: .:: .: . .:..::::: ::.:::::::::::.:::: .... ..
NP_006 LLFIYSRPSYLYSPNTDKIISVFYTIFIPVLNPLIYSLRNKDVKDAAEKVLRSKVDSS
260 270 280 290 300 310
>>NP_003688 (OMIM: 608492) olfactory receptor 5F1 [Homo (314 aa)
initn: 969 init1: 916 opt: 916 Z-score: 1011.3 bits: 195.1 E(85289): 1.4e-49
Smith-Waterman score: 916; 50.9% identity (83.0% similar) in 265 aa overlap (1-265:45-309)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
::.::::::.:::::::::..:::::.: :
NP_003 LGLADTLELQIILFLFFLVIYTLTVLGNLGMILLIRIDSQLHTPMYFFLANLSFVDVCNS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
....::::.:.. ..:.::: :: ::..:: .....:.:. :::: :.::: :::::.
NP_003 TTITPKMLADLLSEKKTISFAGCFLQMYFFISLATTECILFGLMAYDRYAAICRPLLYSL
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
::. . .....: .. ::.: :..:... : :: :::. :::: ::..: :.:: :
NP_003 IMSRTVYLKMAAGAFAAGLLNFMVNTSHVSSLSFCDSNVIHHFFCDSPPLFKLSCSDTIL
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
.. :.::. : . :.:: :: :.:..:. ..:..:: ..::::.:::::... :.:
NP_003 KESISSILAGVNIVGTLLVILSSYSYVLFSIFSMHSGEGRHRAFSTCASHLTAIILFYAT
200 210 220 230 240 250
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
.. :..::...::. .::.:::::.:::::::::::::.:::: :. ......
NP_003 CIYTYLRPSSSYSLNQDKVASVFYTVVIPMLNPLIYSLRSKEVKKALANVISRKRTSSFL
260 270 280 290 300 310
>>NP_001004729 (OMIM: 615702) olfactory receptor 5AN1 [H (311 aa)
initn: 893 init1: 869 opt: 886 Z-score: 978.7 bits: 189.0 E(85289): 9e-48
Smith-Waterman score: 886; 50.2% identity (76.8% similar) in 267 aa overlap (1-267:46-311)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
.:::::.::.::::::::::.:::.:.:.
NP_001 LGFSDFPRIIKVLFTIFLVIYITSLAWNLSLIVLIRMDSHLHTPMYFFLSNLSFIDVCYI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
: . ::::.... ....:.:.:: .: ..:. . .. :. .:::: :.:::::::::
NP_001 SSTVPKMLSNLLQEQQTITFVGCIIQYFIFSTMGLSESCLMTAMAYDRYAAICNPLLYSS
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
:: ::. .:.: :. :: .. . . : ::: ::: ::::: :: : :.:: .
NP_001 IMSPTLCVWMVLGAYMTGLTASLFQIGALLQLHFCGSNVIRHFFCDMPQLLILSCTDTFF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
.. . :.. :. :.:.:.::: :: ..:..: :: :: :.:.::.:::::: . : .
NP_001 VQVMTAILTMFFGIASALVIMISYGYIGISIMKITSAKGRSKAFNTCASHLTAVSLFYTS
200 210 220 230 240 250
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
.:.:. :. : .... .:::::.::::::::::::::::.:::..: . .:: :
NP_001 GIFVYLSSSSGGSSSFDRFASVFYTVVIPMLNPLIYSLRNKEIKDALKR-LQKRKCC
260 270 280 290 300 310
>>NP_036492 (OMIM: 603232) olfactory receptor 1F1 [Homo (312 aa)
initn: 820 init1: 800 opt: 809 Z-score: 894.8 bits: 173.5 E(85289): 4.2e-43
Smith-Waterman score: 809; 45.5% identity (75.9% similar) in 266 aa overlap (1-266:45-310)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
.:. . ::: ::::::::::.::::: :::
NP_036 LGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILSVSIDSCLHTPMYFFLSNLSFVDICFS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
.. ::::.. ... ..::: :: :..: .:: : ::: :::: .::.:.:: :..
NP_036 FTTVPKMLANHILETQTISFCGCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTA
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
:...:: ::.: .:.. .:.. :: : ::. :.:. ::::..:::.: :.::.:
NP_036 KMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFCADNAITHFFCDVTPLLKLSCSDTHL
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
:.. .. .. : . : :: ::..: ..:.. :. :: :.::::.:::..:.. :.:
NP_036 NEVIILSEGALVMITPFLCILASYMHITCTVLKVPSTKGRWKAFSTCGSHLAVVLLFYST
200 210 220 230 240 250
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
.. .: .: .. : . . ...:.::.: :::::.::::::. .: :....: . :
NP_036 IIAVYFNPLSSHSAEKDTMATVLYTVVTPMLNPFIYSLRNRYLKGALKKVVGRVVFSV
260 270 280 290 300 310
>>XP_011520809 (OMIM: 603232) PREDICTED: olfactory recep (312 aa)
initn: 820 init1: 800 opt: 809 Z-score: 894.8 bits: 173.5 E(85289): 4.2e-43
Smith-Waterman score: 809; 45.5% identity (75.9% similar) in 266 aa overlap (1-266:45-310)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
.:. . ::: ::::::::::.::::: :::
XP_011 LGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILSVSIDSCLHTPMYFFLSNLSFVDICFS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
.. ::::.. ... ..::: :: :..: .:: : ::: :::: .::.:.:: :..
XP_011 FTTVPKMLANHILETQTISFCGCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTA
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
:...:: ::.: .:.. .:.. :: : ::. :.:. ::::..:::.: :.::.:
XP_011 KMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFCADNAITHFFCDVTPLLKLSCSDTHL
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
:.. .. .. : . : :: ::..: ..:.. :. :: :.::::.:::..:.. :.:
XP_011 NEVIILSEGALVMITPFLCILASYMHITCTVLKVPSTKGRWKAFSTCGSHLAVVLLFYST
200 210 220 230 240 250
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
.. .: .: .. : . . ...:.::.: :::::.::::::. .: :....: . :
XP_011 IIAVYFNPLSSHSAEKDTMATVLYTVVTPMLNPFIYSLRNRYLKGALKKVVGRVVFSV
260 270 280 290 300 310
>>XP_011520808 (OMIM: 603232) PREDICTED: olfactory recep (322 aa)
initn: 820 init1: 800 opt: 809 Z-score: 894.6 bits: 173.5 E(85289): 4.3e-43
Smith-Waterman score: 809; 45.5% identity (75.9% similar) in 266 aa overlap (1-266:55-320)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
.:. . ::: ::::::::::.::::: :::
XP_011 LGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILSVSIDSCLHTPMYFFLSNLSFVDICFS
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
.. ::::.. ... ..::: :: :..: .:: : ::: :::: .::.:.:: :..
XP_011 FTTVPKMLANHILETQTISFCGCLTQMYFVFMFVDMDNFLLAVMAYDHFVAVCHPLHYTA
90 100 110 120 130 140
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
:...:: ::.: .:.. .:.. :: : ::. :.:. ::::..:::.: :.::.:
XP_011 KMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFCADNAITHFFCDVTPLLKLSCSDTHL
150 160 170 180 190 200
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
:.. .. .. : . : :: ::..: ..:.. :. :: :.::::.:::..:.. :.:
XP_011 NEVIILSEGALVMITPFLCILASYMHITCTVLKVPSTKGRWKAFSTCGSHLAVVLLFYST
210 220 230 240 250 260
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
.. .: .: .. : . . ...:.::.: :::::.::::::. .: :....: . :
XP_011 IIAVYFNPLSSHSAEKDTMATVLYTVVTPMLNPFIYSLRNRYLKGALKKVVGRVVFSV
270 280 290 300 310 320
>>NP_835462 (OMIM: 608493) olfactory receptor 10A5 [Homo (317 aa)
initn: 775 init1: 775 opt: 788 Z-score: 871.8 bits: 169.3 E(85289): 8.1e-42
Smith-Waterman score: 788; 48.7% identity (72.6% similar) in 263 aa overlap (1-260:45-305)
10 20
pF1KE0 MIVLIRI-DSRLHTPMYFFLSHLSFVDTCF
.:.:. . : ::.:::::: .:::.. :
NP_835 MSFSSLPTEIQSLLFLTFLTIYLVTLKGNSLIILVTLADPMLHSPMYFFLRNLSFLEIGF
20 30 40 50 60 70
30 40 50 60 70 80
pF1KE0 SSVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYS
. :. :::: .... .::::::: :..:: :: .:.:::: .:::: :::::.:: :
NP_835 NLVIVPKMLGTLLAQDTTISFLGCATQMYFFFFFGVAECFLLATMAYDRYVAICSPLHYP
80 90 100 110 120 130
90 100 110 120 130 140
pF1KE0 VAMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTR
: :.:: .:... . :. . ..:: : .:::: : .: :::: :.:.::::::
NP_835 VIMNQRTRAKLAAASWFPGFPVATVQTTWLFSFPFCGTNKVNHFFCDSPPVLKLVCADTA
140 150 160 170 180 190
150 160 170 180 190 200
pF1KE0 LNKLAVFIVAGAVGV--FSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFIS
: . .. ..:.. : . : :: :: : :::.: :: :. :.:::::::: .: .
NP_835 L--FEIYAIVGTILVVMIPCLLILCSYTRIAAAILKIPSAKGKHKAFSTCSSHLLVVSLF
200 210 220 230 240 250
210 220 230 240 250 260
pF1KE0 YGTLFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFC
: . . : :... : . .:..:. ::.: :::::.::::::.:::.:. ::
NP_835 YISSSLTYFWPKSNNSPESKKLLSLSYTVVTPMLNPIIYSLRNSEVKNALSRTFHKVLAL
260 270 280 290 300 310
pF1KE0 KA
NP_835 RNCIP
>>NP_003687 (OMIM: 608495) olfactory receptor 6A2 [Homo (327 aa)
initn: 776 init1: 635 opt: 755 Z-score: 835.7 bits: 162.6 E(85289): 8.3e-40
Smith-Waterman score: 755; 45.8% identity (72.9% similar) in 262 aa overlap (1-257:46-306)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
.:. :: : :: ::::::...::.. .
NP_003 LGFPAPAPLQVLLFALLLLAYVLVLTENTLIIMAIRNHSTLHKPMYFFLANMSFLEIWYV
20 30 40 50 60 70
40 50 60 70 80
pF1KE0 SVVSPKMLTDFFVKRKA----ISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPL
.:. ::::. : ... ::: :: : .:: . ..: :: :::: :.::: ::
NP_003 TVTIPKMLAGFVGSKQDHGQLISFEGCMTQLYFFLGLGCTECVLLAVMAYDRYMAICYPL
80 90 100 110 120 130
90 100 110 120 130 140
pF1KE0 LYSVAMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCA
: : .: :::.:...: .. :. .:... : .::::.:: ::::.::::.: :.
NP_003 HYPVIVSGRLCVQMAAGSWAGGFGISMVKVFLISGLSYCGPNIINHFFCDVSPLLNLSCT
140 150 160 170 180 190
150 160 170 180 190 200
pF1KE0 DTRLNKLAVFIVAGAVGVFSGLTIL-ISYIYILMAILRIRSADGRCKTFSTCSSHLTAVF
: .:. ::.: . ... :.. ::. : :...: :: :: :.::::.::::.:.
NP_003 DMSTAELTDFILAIFI-LLGPLSVTGASYVAITGAVMHIPSAAGRYKAFSTCASHLTVVI
200 210 220 230 240 250
210 220 230 240 250 260
pF1KE0 ISYGTLFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRK
: :.. .:::..:.: ..: ::.:::.:....:.:::.:: :::.::: :.
NP_003 IFYAASIFIYARPKALSAFDTNKLVSVLYAVIVPLLNPIIYCLRNQEVKRALCCTLHLYQ
260 270 280 290 300 310
pF1KE0 FCKA
NP_003 HQDPDPKKASRNV
320
>>NP_003691 (OMIM: 608494) olfactory receptor 2D2 [Homo (308 aa)
initn: 719 init1: 585 opt: 744 Z-score: 824.0 bits: 160.4 E(85289): 3.7e-39
Smith-Waterman score: 744; 43.2% identity (74.1% similar) in 266 aa overlap (1-266:45-307)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
.: :...::.::::::::: .::..: :::
NP_003 LGLSDGPHTEQLLFIVLLGVYLVTVLGNLLLISLVHVDSQLHTPMYFFLCNLSLADLCFS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
. . :. :. .. ..:.:.: :: . :: .: ..: :: :.:: :::::::: :
NP_003 TNIVPQALVHLLSRKKVIAFTLCAARLLFFLIFGCTQCALLAVMSYDRYVAICNPLRYPN
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
:. ..:.::..: .. :.. ... :: . ::. : : : :::. :: :. .::.
NP_003 IMTWKVCVQLATGSWTSGILVSVVDTTFILRLPYRGSNSIAHFFCEAPALLILASTDTHA
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
...:.:... .. .. . ::.:: :........:. : :.::::.::: .:.. ::.
NP_003 SEMAIFLMGVVILLIPVFLILVSYGRIIVTVVKMKSTVGSLKAFSTCGSHLMVVILFYGS
200 210 220 230 240 250
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
.. :. :.. : . .: :::::. : :::::::::::::.:: :. : :. :.:
NP_003 AIITYMTPKS--SKQQEKSVSVFYAIVTPMLNPLIYSLRNKDVKAAL-RKVATRNFP
260 270 280 290 300
>>NP_009091 (OMIM: 600578) olfactory receptor 2H2 [Homo (312 aa)
initn: 787 init1: 711 opt: 731 Z-score: 809.8 bits: 157.8 E(85289): 2.3e-38
Smith-Waterman score: 731; 42.5% identity (72.6% similar) in 259 aa overlap (1-259:43-301)
10 20 30
pF1KE0 MIVLIRIDSRLHTPMYFFLSHLSFVDTCFS
.:.: .: .::.:::::::.:::.: ::.
NP_009 LGFSEHPGLERTLFVVVLTSYLLTLVGNTLIILLSALDPKLHSPMYFFLSNLSFLDLCFT
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 SVVSPKMLTDFFVKRKAISFLGCALQQWFFGFFVAADCFLLESMAYDCYVAICNPLLYSV
. :.::.... .:.:::: :..: ..: . ...:.:: ::.: :::.:.:: :..
NP_009 TSCVPQMLVNLWGPKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYAT
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 AMSQRLCIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRL
. ::: ::. .::::......: ... :::: .. : :.. :. : : ::
NP_009 IIHPRLCWQLASVAWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSCEDTSY
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE0 NKLAVFIVAGAVGVFSGLTILISYIYILMAILRIRSADGRCKTFSTCSSHLTAVFISYGT
:.. : ... . : ::.:: : :.::: :: :: :.:.:::::::.: . :..
NP_009 NEIQVAVASVFILVVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSS
200 210 220 230 240 250
220 230 240 250 260
pF1KE0 LFFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPLIYSLRNKEVKDAIHRTVTQRKFCKA
.. .:..:. .. . .: ..::.. : ::::::.:::::: :..:
NP_009 VIAVYLQPKNPYAQERGKFFGLFYAVGTPSLNPLIYTLRNKEVTRAFRRLLGKEMGLTQS
260 270 280 290 300 310
269 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:06:06 2016 done: Sat Nov 5 12:06:07 2016
Total Scan time: 5.970 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]