Result of FASTA (omim) for pF1KE0843
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0843, 353 aa
  1>>>pF1KE0843 353 - 353 aa - 353 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8271+/-0.000446; mu= 19.0199+/- 0.028
 mean_var=63.2031+/-13.033, 0's: 0 Z-trim(109.9): 88  B-trim: 0 in 0/51
 Lambda= 0.161326
 statistics sampled from 18070 (18146) to 18070 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.557), E-opt: 0.2 (0.213), width:  16
 Scan time:  7.020

The best scores are:                                      opt bits E(85289)
NP_065684 (OMIM: 605234) vomeronasal type-1 recept ( 353) 2389 565.0 8.8e-161
NP_076411 (OMIM: 604790) taste receptor type 2 mem ( 317)  214 58.7   2e-08
XP_011515565 (OMIM: 188545) PREDICTED: thyrotropin ( 398)  160 46.3 0.00014
NP_003292 (OMIM: 188545) thyrotropin-releasing hor ( 398)  160 46.3 0.00014
NP_076408 (OMIM: 604793) taste receptor type 2 mem ( 318)  156 45.2 0.00023
NP_795364 (OMIM: 613965) taste receptor type 2 mem ( 307)  140 41.5  0.0029
NP_076407 (OMIM: 604794) taste receptor type 2 mem ( 309)  134 40.1  0.0078
NP_001718 (OMIM: 300107) bombesin receptor subtype ( 399)  134 40.2  0.0095


>>NP_065684 (OMIM: 605234) vomeronasal type-1 receptor 1  (353 aa)
 initn: 2389 init1: 2389 opt: 2389  Z-score: 3007.5  bits: 565.0 E(85289): 8.8e-161
Smith-Waterman score: 2389; 100.0% identity (100.0% similar) in 353 aa overlap (1-353:1-353)

               10        20        30        40        50        60
pF1KE0 MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 LGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 CKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 CKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSLHAVLYFSPDFMSLGFMVWASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSLHAVLYFSPDFMSLGFMVWASG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 SMVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SMVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVA
              250       260       270       280       290       300

              310       320       330       340       350   
pF1KE0 NPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP
              310       320       330       340       350   

>>NP_076411 (OMIM: 604790) taste receptor type 2 member   (317 aa)
 initn: 110 init1:  63 opt: 214  Z-score: 272.4  bits: 58.7 E(85289): 2e-08
Smith-Waterman score: 214; 24.0% identity (55.9% similar) in 304 aa overlap (44-334:3-289)

            20        30        40        50          60        70 
pF1KE0 TRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISF--LIQTGVGILGNSFLLCFYN
                                     : .:: ..:  ...  .: :::::.     
NP_076                             MGGVIKSIFTFVLIVEFIIGNLGNSFIALVNC
                                           10        20        30  

              80        90        100       110       120       130
pF1KE0 LILFTGHKLRPTDLILSQLALAN-SMVLFFKGIPQTMAAFGLKYLLNDTGCKFVFYYHRV
       .    :.:.  .: ::. ::..  :.: .. :    ...:    . ..   ...     :
NP_076 IDWVKGRKISSVDRILTALAISRISLVWLIFG-SWCVSVFFPALFATEKMFRMLTNIWTV
             40        50        60         70        80        90 

              140       150        160       170       180         
pF1KE0 GTRVSLSTICLLNGFQAIKL-NPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLLL
        .. :.     :. :  .:. : :   .. .: :  . . .  ::  .  ...: .   :
NP_076 INHFSVWLATGLGTFYFLKIANFSNSIFLYLKWRVKKVV-LVLLLVTSVFLFLNIA---L
             100       110       120       130        140          

     190       200       210             220       230       240   
pF1KE0 VNGPLNSKNSSAKNNYGYCSYKASK--RFSSL----HAVLYFSPDFMSLGFMVWASGSMV
       .:  .:.. .. . :   ::  .:.  :::::     .:. : :  .::....     ..
NP_076 INIHINASINGYRRNKT-CSSDSSNFTRFSSLIVLTSTVFIFIPFTLSLAMFLL----LI
       150       160        170       180       190       200      

           250       260       270       280       290          300
pF1KE0 FFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHS---FLTIWTTVVA
       : ...:....:  :. ..:   : .:   :  .  : .::..:.. :   :...::.   
NP_076 FSMWKHRKKMQ--HTVKISGDASTKA---HRGVKSVITFFLLYAIFSLSFFISVWTSERL
            210         220          230       240       250       

              310       320       330       340       350          
pF1KE0 NPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP       
       . .  :... . .:  .:.    :::... .. :                          
NP_076 EENLIILSQVMGMA--YPSCHSCVLILGNKKLRQASLSVLLWLRYMFKDGEPSGHKEFRE
       260       270         280       290       300       310     

NP_076 SS
         

>>XP_011515565 (OMIM: 188545) PREDICTED: thyrotropin-rel  (398 aa)
 initn: 137 init1:  86 opt: 160  Z-score: 203.1  bits: 46.3 E(85289): 0.00014
Smith-Waterman score: 173; 21.8% identity (52.1% similar) in 357 aa overlap (27-347:7-345)

               10        20        30         40        50         
pF1KE0 MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQ-HPLDFDEMAFGKVKSGISFLIQTGVG
                                 :.::..: .:     . . .: . .  ::  :.:
XP_011                     MENETVSELNQTQLQPRAVVALEY-QVVTILLVLIICGLG
                                   10        20         30         

      60        70        80        90       100       110         
pF1KE0 ILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDT
       :.:: ...    ... : :   ::.  : .::.:. :::   :.:.   ..  ... . .
XP_011 IVGNIMVVL---VVMRTKHMRTPTNCYLVSLAVADLMVLVAAGLPNITDSIYGSWVYGYV
      40           50        60        70        80        90      

     120       130       140       150       160            170    
pF1KE0 GCKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKI-----RSPRFIDFCCLL
       ::  . : . .:  .:    : ...: .:.   .::. .. ..     :. ..: :    
XP_011 GCLCITYLQYLGINASS---CSITAF-TIERYIAICHPIKAQFLCTFSRAKKIIIFV---
        100       110           120       130       140            

          180       190       200       210            220         
pF1KE0 CWAPHVLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSL-----HAVLYFSPDF
        ::   :.    ..:..  ... ...   .   :.:: :. . :       .:.:  :  
XP_011 -WAFTSLYCMLWFFLLDLNISTYKDAIVIS---CGYKISRNYYSPIYLMDFGVFYVVP--
      150       160       170          180       190       200     

     230       240                    250            260        270
pF1KE0 MSLGFMVWASGSMVFFL-------------YRHKQQVQH-----NHSNR-LSCRPSQEAR
       : :. ....  . ..::             ... .  :.     : ::: ..   :.. .
XP_011 MILATVLYGFIARILFLNPIPSDPKENSKTWKNDSTHQNTNLNVNTSNRCFNSTVSSRKQ
           210       220       230       240       250       260   

              280       290       300         310       320        
pF1KE0 ATHTIMVLVSSFFVFYSVHSFLTIWTTVVANPGQ--WIVTNSVLVASCFPARSPFVL-IM
       .:. . :.:  : ...  .  :.. .. ...: :  :..    .      : .: .  .:
XP_011 VTKMLAVVVILFALLWMPYRTLVVVNSFLSSPFQENWFLLFCRICIYLNSAINPVIYNLM
           270       280       290       300       310       320   

       330          340       350                                  
pF1KE0 SDTHISQF---CFACRTRKTLFPNLVVMP                               
       :.   . :   :  :. . :  :                                     
XP_011 SQKFRAAFRKLC-NCKQKPTEKPANYSVALNYSVIKESDHFSTELDDITVTDTYLSATKV
           330        340       350       360       370       380  

>>NP_003292 (OMIM: 188545) thyrotropin-releasing hormone  (398 aa)
 initn: 137 init1:  86 opt: 160  Z-score: 203.1  bits: 46.3 E(85289): 0.00014
Smith-Waterman score: 173; 21.8% identity (52.1% similar) in 357 aa overlap (27-347:7-345)

               10        20        30         40        50         
pF1KE0 MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQ-HPLDFDEMAFGKVKSGISFLIQTGVG
                                 :.::..: .:     . . .: . .  ::  :.:
NP_003                     MENETVSELNQTQLQPRAVVALEY-QVVTILLVLIICGLG
                                   10        20         30         

      60        70        80        90       100       110         
pF1KE0 ILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDT
       :.:: ...    ... : :   ::.  : .::.:. :::   :.:.   ..  ... . .
NP_003 IVGNIMVVL---VVMRTKHMRTPTNCYLVSLAVADLMVLVAAGLPNITDSIYGSWVYGYV
      40           50        60        70        80        90      

     120       130       140       150       160            170    
pF1KE0 GCKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKI-----RSPRFIDFCCLL
       ::  . : . .:  .:    : ...: .:.   .::. .. ..     :. ..: :    
NP_003 GCLCITYLQYLGINASS---CSITAF-TIERYIAICHPIKAQFLCTFSRAKKIIIFV---
        100       110           120       130       140            

          180       190       200       210            220         
pF1KE0 CWAPHVLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSL-----HAVLYFSPDF
        ::   :.    ..:..  ... ...   .   :.:: :. . :       .:.:  :  
NP_003 -WAFTSLYCMLWFFLLDLNISTYKDAIVIS---CGYKISRNYYSPIYLMDFGVFYVVP--
      150       160       170          180       190       200     

     230       240                    250            260        270
pF1KE0 MSLGFMVWASGSMVFFL-------------YRHKQQVQH-----NHSNR-LSCRPSQEAR
       : :. ....  . ..::             ... .  :.     : ::: ..   :.. .
NP_003 MILATVLYGFIARILFLNPIPSDPKENSKTWKNDSTHQNTNLNVNTSNRCFNSTVSSRKQ
           210       220       230       240       250       260   

              280       290       300         310       320        
pF1KE0 ATHTIMVLVSSFFVFYSVHSFLTIWTTVVANPGQ--WIVTNSVLVASCFPARSPFVL-IM
       .:. . :.:  : ...  .  :.. .. ...: :  :..    .      : .: .  .:
NP_003 VTKMLAVVVILFALLWMPYRTLVVVNSFLSSPFQENWFLLFCRICIYLNSAINPVIYNLM
           270       280       290       300       310       320   

       330          340       350                                  
pF1KE0 SDTHISQF---CFACRTRKTLFPNLVVMP                               
       :.   . :   :  :. . :  :                                     
NP_003 SQKFRAAFRKLC-NCKQKPTEKPANYSVALNYSVIKESDHFSTELDDITVTDTYLSATKV
           330        340       350       360       370       380  

>>NP_076408 (OMIM: 604793) taste receptor type 2 member   (318 aa)
 initn: 137 init1:  73 opt: 156  Z-score: 199.4  bits: 45.2 E(85289): 0.00023
Smith-Waterman score: 156; 22.0% identity (52.6% similar) in 304 aa overlap (45-332:4-292)

           20        30        40        50          60        70  
pF1KE0 RYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLI--QTGVGILGNSFLLCFYNL
                                     ::.. . ::   . .::::::.:.     .
NP_076                            MADKVQTTLLFLAVGEFSVGILGNAFIGLVNCM
                                          10        20        30   

             80        90       100       110       120       130  
pF1KE0 ILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTGCKFVFYYHRVGT
            .:.   ::::..::..   .:    .   . ..      .    ... ..  . .
NP_076 DWVKKRKIASIDLILTSLAISRICLLCVILLDCFILVLYPDVYATGKEMRIIDFFWTLTN
            40        50        60        70        80        90   

            140       150           160       170       180        
pF1KE0 RVSLSTICLLNGFQAIKL----NPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLL
       ..:.     :. .  .:.    .: .  ::  : :  : :..  : : .  :...  .  
NP_076 HLSIWFATCLSIYYFFKIGNFFHP-LFLWM--KWRIDRVISWILLGCVVLSVFISLPATE
           100       110        120         130       140       150

      190        200             210       220       230       240 
pF1KE0 LVNGPLN-SKNSSAKNNYGY-C-----SYKASKRFSSLHAVLYFSPDFMSLGFMVWASGS
        .:. .    ... :.:  . :     .. ..: : .: ..: :   .::. :.      
NP_076 NLNADFRFCVKAKRKTNLTWSCRVNKTQHASTKLFLNLATLLPFCVCLMSF-FL------
              160       170       180       190       200          

             250       260          270       280       290        
pF1KE0 MVFFLYRHKQQVQHNHSNRLSCR-PSQEA--RATHTIMVLVSSFFVFYSVHSFLTIWTTV
       ... : :: ...: . ..   :: :: ::  :: .... ..  :...:   :::   .. 
NP_076 LILSLRRHIRRMQLSATG---CRDPSTEAHVRALKAVISFLLLFIAYYL--SFLIATSSY
           210       220          230       240         250        

      300       310       320       330       340       350        
pF1KE0 VANPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP     
            .  :  .  .:  .:.   :.::......                          
NP_076 FMPETELAVIFGESIALIYPSSHSFILILGNNKLRHASLKVIWKVMSILKGRKFQQHKQI
      260       270       280       290       300       310        

>>NP_795364 (OMIM: 613965) taste receptor type 2 member   (307 aa)
 initn:  79 init1:  53 opt: 140  Z-score: 179.5  bits: 41.5 E(85289): 0.0029
Smith-Waterman score: 140; 23.4% identity (52.2% similar) in 299 aa overlap (52-332:13-290)

              30        40        50        60        70        80 
pF1KE0 YSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLR
                                     : . . .:: .:.:..   .   .   .: 
NP_795                   MQAALTAFFVLLFSLLSLLGIAANGFIVLVLGREWLRYGRLL
                                 10        20        30        40  

              90       100       110       120       130       140 
pF1KE0 PTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTGCKFVFYYHRVGTRVSLSTIC-
       : :.:: .:. :. . : . :  ...   . :   .    .  :. :      .   .: 
NP_795 PLDMILISLG-ASRFCLQLVGTVHNFYYSAQKVEYSGGLGRQFFHLHWHFLNSATFWFCS
             50         60        70        80        90       100 

              150        160       170       180          190      
pF1KE0 LLNGFQAIKL-NPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLLL---VNGPLNS
        :. .  .:. : .   .. .: : : .. .  :      ::..  . ::   :: :.  
NP_795 WLSVLFCVKIANITHSTFLWLKWRFPGWVPWLLL----GSVLISFIITLLFFWVNYPVY-
             110       120       130           140       150       

        200       210       220       230       240                
pF1KE0 KNSSAKNNYGYCSYKASKRFSSLHAVLYFSPDFMSLGFMVWASGSMVFF---------LY
       ..   ..  :  .:: . :. .     :. :   :: ...:.    ::.         : 
NP_795 QEFLIRKFSGNMTYKWNTRIET-----YYFP---SLKLVIWSIPFSVFLVSIMLLINSLR
        160       170            180          190       200        

       250        260       270       280       290          300   
pF1KE0 RHKQQVQHN-HSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTV---VANPG
       :: :..::: :: .    :: .:. :...  :.: :...:.. :::..   .   ..  .
NP_795 RHTQRMQHNGHSLQ---DPSTQAH-TRALKSLIS-FLILYAL-SFLSLIIDAAKFISMQN
      210       220           230        240        250       260  

           310       320       330       340       350   
pF1KE0 QWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP
       ..    .. :  :. .. ::.::.:. ..                     
NP_795 DFYWPWQIAVYLCISVH-PFILIFSNLKLRSVFSQLLLLARGFWVA    
            270        280       290       300           

>>NP_076407 (OMIM: 604794) taste receptor type 2 member   (309 aa)
 initn: 100 init1:  59 opt: 134  Z-score: 171.9  bits: 40.1 E(85289): 0.0078
Smith-Waterman score: 134; 21.9% identity (52.6% similar) in 302 aa overlap (58-340:19-303)

        30        40        50        60        70        80       
pF1KE0 DLNENQHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTDLIL
                                     .:::::...     .  .  .:.  .: ::
NP_076             MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYIL
                           10        20        30        40        

        90       100       110        120            130       140 
pF1KE0 SQLALANSMVLFFKGIPQTMAAFGLKYLLN-DTGCK-----FVFYYHRVGTRVSLSTICL
       ..:..:   ..      ..:.. :.  .:: :.  :      .: .   .. ...     
NP_076 TNLVIARICLI------SVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTC
       50              60        70        80        90       100  

             150          160       170       180         190      
pF1KE0 LNGFQAIKLNPS---ICRWMEIKIRSPRFIDFCCLLCWAPHVLMN--ASVLLLVNGPLNS
       :: :  .:.  :   .  :.. ::     . .  : :.:  .:..  :...:  .  ...
NP_076 LNVFYFLKIASSSHPLFLWLKWKI--DMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHA
            110       120         130       140       150       160

        200       210       220         230        240       250   
pF1KE0 KNSSAKNNYGYCSYKASKRFSSLHAVLYFS--PDFMSL-GFMVWASGSMVFFLYRHKQQV
         .  .:   .   .    :  :     :.  : ..:: .:..     .:  :.:: .:.
NP_076 IAKHKRNITEMFHVSKIPYFEPLTLFNLFAIVPFIVSLISFFL-----LVRSLWRHTKQI
              170       180       190       200            210     

           260         270       280       290       300       310 
pF1KE0 QHNHSNRLSCRPSQEA--RATHTIMVLVSSFFVFYSVHSFLTIWTTVVANPGQWIVTNSV
       .   ..  :  :: :.  :: .:.  ..  ::..: . :.:  .. ....  .  :  . 
NP_076 KLYATG--SRDPSTEVHVRAIKTMTSFIFFFFLYY-ISSILMTFSYLMTKY-KLAVEFGE
         220         230       240        250       260        270 

             320       330          340       350   
pF1KE0 LVASCFPARSPFVLIMSDTHISQ-FC--FACRTRKTLFPNLVVMP
       ..:  .:    ..::. .... : :   ..::             
NP_076 IAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI       
             280       290       300                

>>NP_001718 (OMIM: 300107) bombesin receptor subtype-3 [  (399 aa)
 initn: 107 init1:  46 opt: 134  Z-score: 170.3  bits: 40.2 E(85289): 0.0095
Smith-Waterman score: 134; 20.8% identity (56.2% similar) in 322 aa overlap (50-347:52-356)

      20        30        40        50        60        70         
pF1KE0 LFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHK
                                     :.. .  .::::::..:.     ..:  ..
NP_001 SSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISVGILGNAILI----KVFFKTKS
              30        40        50        60            70       

      80         90       100       110        120       130       
pF1KE0 LRPT-DLILSQLALANSMVLFFKGIPQTMAAFGLK-YLLNDTGCKFVFYYHRVGTRVSLS
       .. . ......::... ..:..  .:   . .  . .:..  ::: . . . ... ::. 
NP_001 MQTVPNIFITSLAFGD-LLLLLTCVPVDATHYLAEGWLFGRIGCKVLSFIRLTSVGVSVF
        80        90        100       110       120       130      

       140         150       160       170         180       190   
pF1KE0 TICLLNG--FQAIKLNPSICRWMEIKIRSPRFIDFCCLL-C-WAPHVLMNASVLLLVNGP
       :. .:..  ..:. ..:     .: .  :  ..  :    : :   ...     .. :  
NP_001 TLTILSADRYKAV-VKP-----LE-RQPSNAILKTCVKAGCVWIVSMIFALPEAIFSN-V
        140        150             160       170       180         

           200        210        220       230        240       250
pF1KE0 LNSKNSSAKNNYGYC-SYKASKRF-SSLHAVLYFSPDFM-SLGFMVWASGSMVFFLYRHK
        . .. . . ..  : :: .::.. . .:..: :   ..  :...    . ..  ::.  
NP_001 YTFRDPNKNMTFESCTSYPVSKKLLQEIHSLLCFLVFYIIPLSIISVYYSLIARTLYKST
      190       200       210       220       230       240        

              260       270       280              290       300   
pF1KE0 QQVQHNHSNRLSCRPSQEARATHTIMVLVSSF-------FVFYSVHSFLTIWTTVVANPG
        ..  .....   .  .. : ..:..:::. :        ..:  ::: :  : :  .  
NP_001 LNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSF-TSQTYVDPSAM
      250       260       270       280       290        300       

             310         320        330          340       350     
pF1KE0 QWIVT--NSVLV--ASCFPARSPFVLI-MSDTHISQF---CFACRTRKTLFPNLVVMP  
       ..: :  . ::.   ::    .::.:  .: .  ..:    : :....   :        
NP_001 HFIFTIFSRVLAFSNSCV---NPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADTSLTT
       310       320          330       340       350       360    

NP_001 LAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF
          370       380       390         




353 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 03:33:07 2016 done: Sat Nov  5 03:33:08 2016
 Total Scan time:  7.020 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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