Result of FASTA (omim) for pF1KE0861
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0861, 276 aa
  1>>>pF1KE0861 276 - 276 aa - 276 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.4804+/-0.000628; mu= 20.1793+/- 0.039
 mean_var=92.9057+/-22.303, 0's: 0 Z-trim(104.8): 272  B-trim: 1438 in 2/48
 Lambda= 0.133062
 statistics sampled from 12749 (13114) to 12749 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.47), E-opt: 0.2 (0.154), width:  16
 Scan time:  5.570

The best scores are:                                      opt bits E(85289)
NP_835462 (OMIM: 608493) olfactory receptor 10A5 [ ( 317)  754 155.9   9e-38
NP_036501 (OMIM: 608497) olfactory receptor 2F1 [H ( 317)  728 150.9 2.8e-36
XP_011514322 (OMIM: 608497) PREDICTED: olfactory r ( 317)  728 150.9 2.8e-36
XP_011514321 (OMIM: 608497) PREDICTED: olfactory r ( 317)  728 150.9 2.8e-36
NP_003688 (OMIM: 608492) olfactory receptor 5F1 [H ( 314)  726 150.5 3.7e-36
NP_006628 (OMIM: 608496) olfactory receptor 5I1 [H ( 314)  712 147.8 2.4e-35
NP_003687 (OMIM: 608495) olfactory receptor 6A2 [H ( 327)  709 147.2 3.6e-35
NP_036492 (OMIM: 603232) olfactory receptor 1F1 [H ( 312)  697 144.9 1.7e-34
XP_011520809 (OMIM: 603232) PREDICTED: olfactory r ( 312)  697 144.9 1.7e-34
XP_011520808 (OMIM: 603232) PREDICTED: olfactory r ( 322)  697 144.9 1.8e-34
NP_003691 (OMIM: 608494) olfactory receptor 2D2 [H ( 308)  693 144.1 2.9e-34
NP_001004729 (OMIM: 615702) olfactory receptor 5AN ( 311)  687 143.0 6.6e-34
XP_011513214 (OMIM: 600578) PREDICTED: olfactory r ( 300)  681 141.8 1.4e-33
NP_009091 (OMIM: 600578) olfactory receptor 2H2 [H ( 312)  681 141.8 1.5e-33
NP_001005216 (OMIM: 615016,615082) olfactory recep ( 311)  664 138.6 1.4e-32
NP_001001957 (OMIM: 616729) olfactory receptor 2W3 ( 314)  631 132.2 1.1e-30
NP_002539 (OMIM: 164342) olfactory receptor 1D2 [H ( 312)  624 130.9 2.9e-30
NP_001005487 (OMIM: 611677) olfactory receptor 13G ( 307)  610 128.2 1.8e-29
NP_001005191 (OMIM: 611538) olfactory receptor 7D4 ( 312)  610 128.2 1.9e-29
NP_001004703 (OMIM: 614273) olfactory receptor 4C4 ( 309)  545 115.7 1.1e-25
NP_110401 (OMIM: 611268) olfactory receptor 51E2 [ ( 320)  463 100.0 5.9e-21
NP_689643 (OMIM: 611267) olfactory receptor 51E1 [ ( 318)  423 92.3 1.2e-18
XP_011535972 (OMIM: 605108) PREDICTED: neuromedin- ( 321)  210 51.4 2.5e-06
NP_064552 (OMIM: 605108) neuromedin-U receptor 2 [ ( 415)  210 51.6 2.9e-06
NP_001718 (OMIM: 300107) bombesin receptor subtype ( 399)  206 50.8 4.8e-06
NP_000667 (OMIM: 600446) adenosine receptor A2b [H ( 332)  203 50.1 6.4e-06
NP_000721 (OMIM: 118444) cholecystokinin receptor  ( 428)  199 49.5 1.3e-05
NP_071429 (OMIM: 607448) neuropeptide FF receptor  ( 430)  189 47.6 4.8e-05
NP_002502 (OMIM: 162341) neuromedin-B receptor iso ( 390)  188 47.3 5.2e-05
NP_000016 (OMIM: 109691,601665) beta-3 adrenergic  ( 408)  188 47.4 5.3e-05
NP_778237 (OMIM: 608923) trace amine-associated re ( 345)  184 46.5 8.2e-05
XP_011521963 (OMIM: 600446) PREDICTED: adenosine r ( 116)  179 44.9 8.3e-05
XP_011529100 (OMIM: 300253) PREDICTED: probable G- ( 373)  178 45.4 0.00019
NP_061842 (OMIM: 300253) probable G-protein couple ( 373)  178 45.4 0.00019
XP_011508791 (OMIM: 604153) PREDICTED: neuromedin- ( 313)  177 45.1  0.0002
XP_006712259 (OMIM: 604153) PREDICTED: neuromedin- ( 333)  177 45.1  0.0002
NP_612200 (OMIM: 609333) trace amine-associated re ( 339)  177 45.1 0.00021
XP_006712258 (OMIM: 604153) PREDICTED: neuromedin- ( 370)  177 45.2 0.00022
XP_011508790 (OMIM: 604153) PREDICTED: neuromedin- ( 376)  177 45.2 0.00022
XP_011508789 (OMIM: 604153) PREDICTED: neuromedin- ( 403)  177 45.2 0.00023
NP_006047 (OMIM: 604153) neuromedin-U receptor 1 [ ( 426)  177 45.3 0.00024
NP_000907 (OMIM: 167055) oxytocin receptor [Homo s ( 389)  175 44.8 0.00029
XP_011532064 (OMIM: 167055) PREDICTED: oxytocin re ( 389)  175 44.8 0.00029
NP_000855 (OMIM: 182133) 5-hydroxytryptamine recep ( 377)  171 44.1 0.00049
NP_005305 (OMIM: 305670) gastrin-releasing peptide ( 384)  171 44.1 0.00049
NP_150598 (OMIM: 606665) melanopsin isoform 1 [Hom ( 478)  169 43.8 0.00073
XP_016872445 (OMIM: 606665) PREDICTED: melanopsin  ( 528)  169 43.9 0.00078
NP_056542 (OMIM: 162323) substance-P receptor isof ( 311)  166 43.0 0.00084
XP_011527129 (OMIM: 162651) PREDICTED: neurotensin ( 336)  166 43.0 0.00088
NP_001049 (OMIM: 162323) substance-P receptor isof ( 407)  166 43.1 0.00099


>>NP_835462 (OMIM: 608493) olfactory receptor 10A5 [Homo  (317 aa)
 initn: 789 init1: 430 opt: 754  Z-score: 799.2  bits: 155.9 E(85289): 9e-38
Smith-Waterman score: 754; 41.6% identity (75.2% similar) in 274 aa overlap (5-276:5-278)

               10        20         30        40        50         
pF1KE0 MRRKNLTEVTEFVFLGFSRFHKH-HITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPM
           : ::..::....:: .  . .  ::..:: .: .:. ::..:. .   :  ::.::
NP_835 MAIGNWTEISEFILMSFSSLPTEIQSLLFLTFLTIYLVTLKGNSLIILVTLADPMLHSPM
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KE0 YFFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTLAINNCFLLTVMG
       ::::  :.  .  ..: :.:.::.....:   ::. ::.:: .::  ... .::::..:.
NP_835 YFFLRNLSFLEIGFNLVIVPKMLGTLLAQDTTISFLGCATQMYFFFFFGVAECFLLATMA
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KE0 YDHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFCHTV-VGHFFC
       ::.:.:::.::.: :: .... ..:. ...  :. .:.::.: .:..::: :  :.::::
NP_835 YDRYVAICSPLHYPVIMNQRTRAKLAAASWFPGFPVATVQTTWLFSFPFCGTNKVNHFFC
              130       140       150       160       170       180

      180       190       200       210       220       230        
pF1KE0 DILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFA
       :  ::.:: : .:.. ::  .:  ..:...:  :.. ::. : ...::: ::.: .:.:.
NP_835 DSPPVLKLVCADTALFEIYAIVGTILVVMIPCLLILCSYTRIAAAILKIPSAKGKHKAFS
              190       200       210       220       230       240

      240       250       260       270                            
pF1KE0 TCAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                      
       ::. :: :: . :  .:..:. :::.:: :.  :::..                      
NP_835 TCSSHLLVVSLFYISSSLTYFWPKSNNSPESKKLLSLSYTVVTPMLNPIIYSLRNSEVKN
              250       260       270       280       290       300

NP_835 ALSRTFHKVLALRNCIP
              310       

>>NP_036501 (OMIM: 608497) olfactory receptor 2F1 [Homo   (317 aa)
 initn: 711 init1: 414 opt: 728  Z-score: 772.2  bits: 150.9 E(85289): 2.8e-36
Smith-Waterman score: 728; 40.6% identity (72.8% similar) in 276 aa overlap (1-275:1-276)

               10        20        30        40        50        60
pF1KE0 MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPMY
       :   : : :.::..::.:     ...:::.::..:..:: :: .:. .: .: .::::::
NP_036 MGTDNQTWVSEFILLGLSSDWDTRVSLFVLFLVMYVVTVLGNCLIVLLIRLDSRLHTPMY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTLAINNCFLLTVMGY
       :::. :.   . :.  ..::.:. :... . : . .:..: :: ..:.  .  ::.::.:
NP_036 FFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAY
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KE0 DHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFCHT-VVGHFFCD
       :.:.:.:. ::: .:    .:..:.  ..  :.  . ::..  : ::.:..  . :. :.
NP_036 DRYVAVCDALRYSAIMHGGLCARLAITSWVSGFISSPVQTAITFQLPMCRNKFIDHISCE
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KE0 ILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFAT
       .: :..:.:..:. ::.  .:  . ....:. ::..::. ::::.::: : :: ::.: :
NP_036 LLAVVRLACVDTSSNEVTIMVSSIVLLMTPFCLVLLSYIQIISTILKIQSREGRKKAFHT
              190       200       210       220       230       240

     240       250       260       270                             
pF1KE0 CAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                       
       :: ::::: . :: : ..:..:.:  :. :. :.::                        
NP_036 CASHLTVVALCYGVAIFTYIQPHSSPSVLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGA
              250       260       270       280       290       300

NP_036 WQKLLWKFSGLTSKLAT
              310       

>>XP_011514322 (OMIM: 608497) PREDICTED: olfactory recep  (317 aa)
 initn: 711 init1: 414 opt: 728  Z-score: 772.2  bits: 150.9 E(85289): 2.8e-36
Smith-Waterman score: 728; 40.6% identity (72.8% similar) in 276 aa overlap (1-275:1-276)

               10        20        30        40        50        60
pF1KE0 MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPMY
       :   : : :.::..::.:     ...:::.::..:..:: :: .:. .: .: .::::::
XP_011 MGTDNQTWVSEFILLGLSSDWDTRVSLFVLFLVMYVVTVLGNCLIVLLIRLDSRLHTPMY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTLAINNCFLLTVMGY
       :::. :.   . :.  ..::.:. :... . : . .:..: :: ..:.  .  ::.::.:
XP_011 FFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAY
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KE0 DHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFCHT-VVGHFFCD
       :.:.:.:. ::: .:    .:..:.  ..  :.  . ::..  : ::.:..  . :. :.
XP_011 DRYVAVCDALRYSAIMHGGLCARLAITSWVSGFISSPVQTAITFQLPMCRNKFIDHISCE
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KE0 ILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFAT
       .: :..:.:..:. ::.  .:  . ....:. ::..::. ::::.::: : :: ::.: :
XP_011 LLAVVRLACVDTSSNEVTIMVSSIVLLMTPFCLVLLSYIQIISTILKIQSREGRKKAFHT
              190       200       210       220       230       240

     240       250       260       270                             
pF1KE0 CAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                       
       :: ::::: . :: : ..:..:.:  :. :. :.::                        
XP_011 CASHLTVVALCYGVAIFTYIQPHSSPSVLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGA
              250       260       270       280       290       300

XP_011 WQKLLWKFSGLTSKLAT
              310       

>>XP_011514321 (OMIM: 608497) PREDICTED: olfactory recep  (317 aa)
 initn: 711 init1: 414 opt: 728  Z-score: 772.2  bits: 150.9 E(85289): 2.8e-36
Smith-Waterman score: 728; 40.6% identity (72.8% similar) in 276 aa overlap (1-275:1-276)

               10        20        30        40        50        60
pF1KE0 MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPMY
       :   : : :.::..::.:     ...:::.::..:..:: :: .:. .: .: .::::::
XP_011 MGTDNQTWVSEFILLGLSSDWDTRVSLFVLFLVMYVVTVLGNCLIVLLIRLDSRLHTPMY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTLAINNCFLLTVMGY
       :::. :.   . :.  ..::.:. :... . : . .:..: :: ..:.  .  ::.::.:
XP_011 FFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLALGGIEFVLLAVMAY
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KE0 DHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFCHT-VVGHFFCD
       :.:.:.:. ::: .:    .:..:.  ..  :.  . ::..  : ::.:..  . :. :.
XP_011 DRYVAVCDALRYSAIMHGGLCARLAITSWVSGFISSPVQTAITFQLPMCRNKFIDHISCE
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KE0 ILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFAT
       .: :..:.:..:. ::.  .:  . ....:. ::..::. ::::.::: : :: ::.: :
XP_011 LLAVVRLACVDTSSNEVTIMVSSIVLLMTPFCLVLLSYIQIISTILKIQSREGRKKAFHT
              190       200       210       220       230       240

     240       250       260       270                             
pF1KE0 CAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                       
       :: ::::: . :: : ..:..:.:  :. :. :.::                        
XP_011 CASHLTVVALCYGVAIFTYIQPHSSPSVLQEKLFSVFYAILTPMLNPMIYSLRNKEVKGA
              250       260       270       280       290       300

XP_011 WQKLLWKFSGLTSKLAT
              310       

>>NP_003688 (OMIM: 608492) olfactory receptor 5F1 [Homo   (314 aa)
 initn: 507 init1: 507 opt: 726  Z-score: 770.1  bits: 150.5 E(85289): 3.7e-36
Smith-Waterman score: 726; 40.6% identity (71.0% similar) in 276 aa overlap (1-275:1-276)

               10        20        30        40        50        60
pF1KE0 MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPMY
       : ::: : .::::.::..   . .: ::. ::..::::: ::  .. .: :: .::::::
NP_003 MTRKNYTSLTEFVLLGLADTLELQIILFLFFLVIYTLTVLGNLGMILLIRIDSQLHTPMY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTLAINNCFLLTVMGY
       :::. :.   .  .  : :.::...... . ::.:::  : .::..:: ..:.:. .:.:
NP_003 FFLANLSFVDVCNSTTITPKMLADLLSEKKTISFAGCFLQMYFFISLATTECILFGLMAY
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KE0 DHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFCHT-VVGHFFCD
       :.: ::: :: : .: :. : .... :::. ::    :... . .: :: . :. :::::
NP_003 DRYAAICRPLLYSLIMSRTVYLKMAAGAFAAGLLNFMVNTSHVSSLSFCDSNVIHHFFCD
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KE0 ILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFAT
         :..:::: .: ..: :. ..    :.  . ... ::  .. ..... :.:: ...:.:
NP_003 SPPLFKLSCSDTILKESISSILAGVNIVGTLLVILSSYSYVLFSIFSMHSGEGRHRAFST
              190       200       210       220       230       240

     240       250       260       270                             
pF1KE0 CAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                       
       :: :::..:. :.    .:: :.:  :..:: . ::                        
NP_003 CASHLTAIILFYATCIYTYLRPSSSYSLNQDKVASVFYTVVIPMLNPLIYSLRSKEVKKA
              250       260       270       280       290       300

NP_003 LANVISRKRTSSFL
              310    

>>NP_006628 (OMIM: 608496) olfactory receptor 5I1 [Homo   (314 aa)
 initn: 471 init1: 471 opt: 712  Z-score: 755.6  bits: 147.8 E(85289): 2.4e-35
Smith-Waterman score: 712; 42.1% identity (69.2% similar) in 273 aa overlap (4-275:6-278)

                 10        20        30        40        50        
pF1KE0   MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTP
            .: : ::::..:::    . .:.::..:: ::.. . ::  .: .: :: ::.::
NP_006 MEFTDRNYTLVTEFILLGFPTRPELQIVLFLMFLTLYAIILIGNIGLMLLIRIDPHLQTP
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KE0 MYFFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTLAINNCFLLTVM
       :::::: :.     :   :.:.:: .:..... ::  ::. : .:: :.: .. :.:..:
NP_006 MYFFLSNLSFVDLCYFSDIVPKMLVNFLSENKSISYYGCALQFYFFCTFADTESFILAAM
               70        80        90       100       110       120

      120       130       140       150       160        170       
pF1KE0 GYDHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFC-HTVVGHFF
       .::.:.:::::: : :. :. .:..:.  ..  :   . :...  : : .: ..:..:::
NP_006 AYDRYVAICNPLLYTVVMSRGICMRLIVLSYLGGNMSSLVHTSFAFILKYCDKNVINHFF
              130       140       150       160       170       180

       180       190       200       210       220       230       
pF1KE0 CDILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTF
       ::. :..:::: .::::: .  .    : .. . ...::: .:. .:::: :  : ::::
NP_006 CDLPPLLKLSCTDTTINEWLLSTYGSSVEIICFIIIIISYFFILLSVLKIRSFSGRKKTF
              190       200       210       220       230       240

       240       250       260       270                           
pF1KE0 ATCAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                     
       .::: ::: : .. :   . :  :.   : . : ..::                      
NP_006 STCASHLTSVTIYQGTLLFIYSRPSYLYSPNTDKIISVFYTIFIPVLNPLIYSLRNKDVK
              250       260       270       280       290       300

NP_006 DAAEKVLRSKVDSS
              310    

>>NP_003687 (OMIM: 608495) olfactory receptor 6A2 [Homo   (327 aa)
 initn: 466 init1: 296 opt: 709  Z-score: 752.3  bits: 147.2 E(85289): 3.6e-35
Smith-Waterman score: 709; 39.6% identity (71.6% similar) in 278 aa overlap (3-275:4-281)

                10        20        30        40        50         
pF1KE0  MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPM
          :..  .:.:::.:::      .. ::...:. :.:... :..:.  :     :: ::
NP_003 MEWRNHSGRVSEFVLLGFPAPAPLQVLLFALLLLAYVLVLTENTLIIMAIRNHSTLHKPM
               10        20        30        40        50        60

      60        70        80        90           100       110     
pF1KE0 YFFLSMLASSKTVYTLFIIPQMLSSFVTQTQP----ISLAGCTTQTFFFVTLAINNCFLL
       ::::. ..  .  :.   ::.::..:: . :     ::. :: :: .::. :. ..: ::
NP_003 YFFLANMSFLEIWYVTVTIPKMLAGFVGSKQDHGQLISFEGCMTQLYFFLGLGCTECVLL
               70        80        90       100       110       120

         120       130       140       150       160       170     
pF1KE0 TVMGYDHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFCH-TVVG
       .::.::.::::: ::.: ::.: ..:::.. :... :.... :.:  :  : .:  ....
NP_003 AVMAYDRYMAICYPLHYPVIVSGRLCVQMAAGSWAGGFGISMVKVFLISGLSYCGPNIIN
              130       140       150       160       170       180

          180       190       200       210       220       230    
pF1KE0 HFFCDILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWK
       :::::. :...::: . .  :. .:.. .:..: :....  ::: : ..:..: :: :  
NP_003 HFFCDVSPLLNLSCTDMSTAELTDFILAIFILLGPLSVTGASYVAITGAVMHIPSAAGRY
              190       200       210       220       230       240

          240       250       260       270                        
pF1KE0 KTFATCAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                  
       :.:.::: ::::::. :. . . :  ::. .... . :.::                   
NP_003 KAFSTCASHLTVVIIFYAASIFIYARPKALSAFDTNKLVSVLYAVIVPLLNPIIYCLRNQ
              250       260       270       280       290       300

NP_003 EVKRALCCTLHLYQHQDPDPKKASRNV
              310       320       

>>NP_036492 (OMIM: 603232) olfactory receptor 1F1 [Homo   (312 aa)
 initn: 651 init1: 429 opt: 697  Z-score: 740.1  bits: 144.9 E(85289): 1.7e-34
Smith-Waterman score: 697; 39.0% identity (69.0% similar) in 277 aa overlap (1-275:1-276)

               10        20        30        40        50        60
pF1KE0 MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPMY
       :   : . :.::..::.::  ...  ::: :: .:  :: :: .:.  . ::  ::::::
NP_036 MSGTNQSSVSEFLLLGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILSVSIDSCLHTPMY
               10        20        30        40        50        60

               70        80        90       100        110         
pF1KE0 FFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFF-FVTLAINNCFLLTVMG
       :::: :.     ...  .:.::.. . .:: ::. :: :: .: :. . ..: :::.::.
NP_036 FFLSNLSFVDICFSFTTVPKMLANHILETQTISFCGCLTQMYFVFMFVDMDN-FLLAVMA
               70        80        90       100       110          

     120       130       140       150       160        170        
pF1KE0 YDHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFC-HTVVGHFFC
       :::..:.:.::.: .  ....:. :: : . ..   . ...  .  : ::  ... ::::
NP_036 YDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFCADNAITHFFC
     120       130       140       150       160       170         

      180       190       200       210       220       230        
pF1KE0 DILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFA
       :. :..:::: .: .::.: .    .:...:.  .. ::. :  ::::. :..:  :.:.
NP_036 DVTPLLKLSCSDTHLNEVIILSEGALVMITPFLCILASYMHITCTVLKVPSTKGRWKAFS
     180       190       200       210       220       230         

      240       250       260       270                            
pF1KE0 TCAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                      
       ::. ::.::.. :.    .:. : : .: :.: . .:                       
NP_036 TCGSHLAVVLLFYSTIIAVYFNPLSSHSAEKDTMATVLYTVVTPMLNPFIYSLRNRYLKG
     240       250       260       270       280       290         

NP_036 ALKKVVGRVVFSV
     300       310  

>>XP_011520809 (OMIM: 603232) PREDICTED: olfactory recep  (312 aa)
 initn: 651 init1: 429 opt: 697  Z-score: 740.1  bits: 144.9 E(85289): 1.7e-34
Smith-Waterman score: 697; 39.0% identity (69.0% similar) in 277 aa overlap (1-275:1-276)

               10        20        30        40        50        60
pF1KE0 MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIICIDRHLHTPMY
       :   : . :.::..::.::  ...  ::: :: .:  :: :: .:.  . ::  ::::::
XP_011 MSGTNQSSVSEFLLLGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILSVSIDSCLHTPMY
               10        20        30        40        50        60

               70        80        90       100        110         
pF1KE0 FFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFF-FVTLAINNCFLLTVMG
       :::: :.     ...  .:.::.. . .:: ::. :: :: .: :. . ..: :::.::.
XP_011 FFLSNLSFVDICFSFTTVPKMLANHILETQTISFCGCLTQMYFVFMFVDMDN-FLLAVMA
               70        80        90       100       110          

     120       130       140       150       160        170        
pF1KE0 YDHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFC-HTVVGHFFC
       :::..:.:.::.: .  ....:. :: : . ..   . ...  .  : ::  ... ::::
XP_011 YDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFCADNAITHFFC
     120       130       140       150       160       170         

      180       190       200       210       220       230        
pF1KE0 DILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIASAEGWKKTFA
       :. :..:::: .: .::.: .    .:...:.  .. ::. :  ::::. :..:  :.:.
XP_011 DVTPLLKLSCSDTHLNEVIILSEGALVMITPFLCILASYMHITCTVLKVPSTKGRWKAFS
     180       190       200       210       220       230         

      240       250       260       270                            
pF1KE0 TCAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT                      
       ::. ::.::.. :.    .:. : : .: :.: . .:                       
XP_011 TCGSHLAVVLLFYSTIIAVYFNPLSSHSAEKDTMATVLYTVVTPMLNPFIYSLRNRYLKG
     240       250       260       270       280       290         

XP_011 ALKKVVGRVVFSV
     300       310  

>>XP_011520808 (OMIM: 603232) PREDICTED: olfactory recep  (322 aa)
 initn: 651 init1: 429 opt: 697  Z-score: 739.9  bits: 144.9 E(85289): 1.8e-34
Smith-Waterman score: 697; 39.0% identity (69.0% similar) in 277 aa overlap (1-275:11-286)

                         10        20        30        40        50
pF1KE0           MRRKNLTEVTEFVFLGFSRFHKHHITLFVVFLILYTLTVAGNAIIMTIIC
                 :   : . :.::..::.::  ...  ::: :: .:  :: :: .:.  . 
XP_011 MGDRRADPRPMSGTNQSSVSEFLLLGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILSVS
               10        20        30        40        50        60

               60        70        80        90       100          
pF1KE0 IDRHLHTPMYFFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFF-FVTLAI
       ::  :::::::::: :.     ...  .:.::.. . .:: ::. :: :: .: :. . .
XP_011 IDSCLHTPMYFFLSNLSFVDICFSFTTVPKMLANHILETQTISFCGCLTQMYFVFMFVDM
               70        80        90       100       110       120

     110       120       130       140       150       160         
pF1KE0 NNCFLLTVMGYDHYMAICNPLRYRVITSKKVCVQLVCGAFSIGLAMAAVQVTSIFTLPFC
       .: :::.::.:::..:.:.::.: .  ....:. :: : . ..   . ...  .  : ::
XP_011 DN-FLLAVMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFC
               130       140       150       160       170         

      170       180       190       200       210       220        
pF1KE0 -HTVVGHFFCDILPVMKLSCINTTINEIINFVVRLFVILVPMGLVFISYVLIISTVLKIA
         ... :::::. :..:::: .: .::.: .    .:...:.  .. ::. :  ::::. 
XP_011 ADNAITHFFCDVTPLLKLSCSDTHLNEVIILSEGALVMITPFLCILASYMHITCTVLKVP
     180       190       200       210       220       230         

      230       240       250       260       270                  
pF1KE0 SAEGWKKTFATCAFHLTVVIVHYGCASIAYLMPKSENSIEQDLLLSVT            
       :..:  :.:.::. ::.::.. :.    .:. : : .: :.: . .:             
XP_011 STKGRWKAFSTCGSHLAVVLLFYSTIIAVYFNPLSSHSAEKDTMATVLYTVVTPMLNPFI
     240       250       260       270       280       290         

XP_011 YSLRNRYLKGALKKVVGRVVFSV
     300       310       320  




276 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 03:42:01 2016 done: Sat Nov  5 03:42:02 2016
 Total Scan time:  5.570 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com