FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0902, 151 aa
  1>>>pF1KE0902 151 - 151 aa - 151 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.2368+/-0.00026; mu= 8.9798+/- 0.016
 mean_var=96.2941+/-19.021, 0's: 0 Z-trim(122.4): 4  B-trim: 149 in 1/56
 Lambda= 0.130700
 statistics sampled from 40359 (40363) to 40359 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.473), width:  16
 Scan time:  5.110

The best scores are:                                      opt bits E(85289)
NP_006163 (OMIM: 108780,612201,615745) natriuretic ( 151) 1007 198.7   3e-51


>>NP_006163 (OMIM: 108780,612201,615745) natriuretic pep  (151 aa)
 initn: 1007 init1: 1007 opt: 1007  Z-score: 1041.0  bits: 198.7 E(85289): 3e-51
Smith-Waterman score: 1007; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151)

               10        20        30        40        50        60
pF1KE0 MSSFSTTTVSFLLLLAFQLLGQTRANPMYNAVSNADLMDFKNLLDHLEEKMPLEDEVVPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSSFSTTTVSFLLLLAFQLLGQTRANPMYNAVSNADLMDFKNLLDHLEEKMPLEDEVVPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 QVLSEPNEEAGAALSPLPEVPPWTGEVSPAQRDGGALGRGPWDSSDRSALLKSKLRALLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QVLSEPNEEAGAALSPLPEVPPWTGEVSPAQRDGGALGRGPWDSSDRSALLKSKLRALLT
               70        80        90       100       110       120

              130       140       150 
pF1KE0 APRSLRRSSCFGGRMDRIGAQSGLGCNSFRY
       :::::::::::::::::::::::::::::::
NP_006 APRSLRRSSCFGGRMDRIGAQSGLGCNSFRY
              130       140       150 




151 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 04:24:41 2016 done: Sat Nov  5 04:24:42 2016
 Total Scan time:  5.110 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]