Result of FASTA (ccds) for
pF1KE1020
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1020, 668 aa
1>>>pF1KE1020 668 - 668 aa - 668 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.2649+/-0.000858; mu= 3.6564+/- 0.052
mean_var=244.8178+/-49.258, 0's: 0 Z-trim(116.2): 8 B-trim: 278 in 1/53
Lambda= 0.081970
statistics sampled from 16845 (16850) to 16845 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.518), width: 16
Scan time: 4.810
The best scores are: opt bits E(32554)
CCDS1103.1 FAM189B gene_id:10712|Hs108|chr1 ( 668) 4620 559.3 6.1e-159
CCDS58035.1 FAM189B gene_id:10712|Hs108|chr1 ( 650) 4009 487.1 3.4e-137
CCDS1104.1 FAM189B gene_id:10712|Hs108|chr1 ( 572) 3486 425.2 1.3e-118
CCDS45198.1 FAM189A1 gene_id:23359|Hs108|chr15 ( 539) 820 109.9 9.8e-24
>>CCDS1103.1 FAM189B gene_id:10712|Hs108|chr1 (668 aa)
initn: 4620 init1: 4620 opt: 4620 Z-score: 2967.0 bits: 559.3 E(32554): 6.1e-159
Smith-Waterman score: 4620; 99.9% identity (99.9% similar) in 668 aa overlap (1-668:1-668)
10 20 30 40 50 60
pF1KE1 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TESIKRSCPSWAGFSLAFSGVVGIVSWKRPFTLVISFFSLLSVLCVMLSMAGSVLSCKNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TESIKRSCPSWAGFSLAFSGVVGIVSWKRPFTLVISFFSLLSVLCVMLSMAGSVLSCKNA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 QLARDFQQCSLEGKVCVCCPSVPLLRPCPESGQELKVAPNSTCDEARGALKNLLFSVCGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QLARDFQQCSLEGKVCVCCPSVPLLRPCPESGQELKVAPNSTCDEARGALKNLLFSVCGL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 TICAAIICTLPAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLEE
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 FVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQAT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 LFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 YVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAAR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 SCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 ASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 PSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAPD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 PSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERGTRPHSLSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERGTRPHSLSLN
610 620 630 640 650 660
pF1KE1 GGSRETGL
::::::::
CCDS11 GGSRETGL
>>CCDS58035.1 FAM189B gene_id:10712|Hs108|chr1 (650 aa)
initn: 3730 init1: 3246 opt: 4009 Z-score: 2576.7 bits: 487.1 E(32554): 3.4e-137
Smith-Waterman score: 4435; 96.9% identity (96.9% similar) in 669 aa overlap (1-668:1-650)
10 20 30 40 50 60
pF1KE1 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TESIKRSCPSWAGFSLAFSGVVGIVSWKRPFTLVISFFSLLSVLCVMLSMAGSVLSCKNA
::::::::::::::: ::::::::::::::::::::::::::
CCDS58 TESIKRSCPSWAGFS-------------------ISFFSLLSVLCVMLSMAGSVLSCKNA
70 80 90 100
130 140 150 160 170 180
pF1KE1 QLARDFQQCSLEGKVCVCCPSVPLLRPCPESGQELKVAPNSTCDEARGALKNLLFSVCGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QLARDFQQCSLEGKVCVCCPSVPLLRPCPESGQELKVAPNSTCDEARGALKNLLFSVCGL
110 120 130 140 150 160
190 200 210 220 230
pF1KE1 TICAAIICTLPAIVCCIQIFSLDLVHT-LAPERSVSGPLGPLGCTSPPPAPLLHTMLDLE
:::::::::: :::::::::::::::: ::::::::::::::::::::::::::::::::
CCDS58 TICAAIICTLSAIVCCIQIFSLDLVHTQLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLE
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE1 EFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE1 TLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TLFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSV
290 300 310 320 330 340
360 370 380 390 400 410
pF1KE1 DYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAA
350 360 370 380 390 400
420 430 440 450 460 470
pF1KE1 RSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RSCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPH
410 420 430 440 450 460
480 490 500 510 520 530
pF1KE1 PASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLAR
470 480 490 500 510 520
540 550 560 570 580 590
pF1KE1 CPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAP
530 540 550 560 570 580
600 610 620 630 640 650
pF1KE1 DPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERGTRPHSLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DPSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERGTRPHSLSL
590 600 610 620 630 640
660
pF1KE1 NGGSRETGL
:::::::::
CCDS58 NGGSRETGL
650
>>CCDS1104.1 FAM189B gene_id:10712|Hs108|chr1 (572 aa)
initn: 3482 init1: 3482 opt: 3486 Z-score: 2243.2 bits: 425.2 E(32554): 1.3e-118
Smith-Waterman score: 3762; 85.5% identity (85.5% similar) in 668 aa overlap (1-668:1-572)
10 20 30 40 50 60
pF1KE1 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MMPSPSDSSRSLTSRPSTRGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSVTT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 TESIKRSCPSWAGFSLAFSGVVGIVSWKRPFTLVISFFSLLSVLCVMLSMAGSVLSCKNA
:::::::::::::::
CCDS11 TESIKRSCPSWAGFS---------------------------------------------
70
130 140 150 160 170 180
pF1KE1 QLARDFQQCSLEGKVCVCCPSVPLLRPCPESGQELKVAPNSTCDEARGALKNLLFSVCGL
:::::::::
CCDS11 ---------------------------------------------------NLLFSVCGL
80
190 200 210 220 230 240
pF1KE1 TICAAIICTLPAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLEE
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TICAAIICTLSAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLLHTMLDLEE
90 100 110 120 130 140
250 260 270 280 290 300
pF1KE1 FVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDCPPSYEAVMGLRGDSQAT
150 160 170 180 190 200
310 320 330 340 350 360
pF1KE1 LFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LFDPQLHDGSCICERVASIVDVSMDSGSLVLSAIGDLPGGSSPSEDSCLLELQGSVRSVD
210 220 230 240 250 260
370 380 390 400 410 420
pF1KE1 YVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAARSYSCSAPEAPPPLGAPTAAR
270 280 290 300 310 320
430 440 450 460 470 480
pF1KE1 SCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SCHRLEGWPPWVGPCFPELRRRVPRGGGRPAAAPPTRAPTRRFSDSSGSLTPPGHRPPHP
330 340 350 360 370 380
490 500 510 520 530 540
pF1KE1 ASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ASPPPLLLPRSHSDPGITTSSDTADFRDLYTKVLEEEAASVSSADTGLCSEACLFRLARC
390 400 410 420 430 440
550 560 570 580 590 600
pF1KE1 PSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAHSLGDLKGSWPGRGLVTRFLQISRKAPD
450 460 470 480 490 500
610 620 630 640 650 660
pF1KE1 PSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERGTRPHSLSLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PSGTGAHGHKQVPRSLWGRPGRESLHLRSCGDLSSSSSLRRLLSGRRLERGTRPHSLSLN
510 520 530 540 550 560
pF1KE1 GGSRETGL
::::::::
CCDS11 GGSRETGL
570
>>CCDS45198.1 FAM189A1 gene_id:23359|Hs108|chr15 (539 aa)
initn: 966 init1: 390 opt: 820 Z-score: 539.6 bits: 109.9 E(32554): 9.8e-24
Smith-Waterman score: 927; 36.0% identity (59.3% similar) in 541 aa overlap (2-515:1-498)
10 20 30 40 50
pF1KE1 MMPSPSDSSRSLTSRPST--RGLTHLRLHRPWLQALLTLGLVQVLLGILVVTFSMVASSV
:: :. . :. ::.. :.:..:: . .:.:: .:. :: :.:. :..: ..
CCDS45 MP-PAGGPRA--PRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALAL
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 TTTESIKRSCPSWAGFSLAFSGVVGIVSWKRPFTLVISFFSLLSVLCVMLSMAGSVLSCK
::. ...::: :::::. .::..:.::::::..:::.:: :::..::::..:::.:::.
CCDS45 TTSARVRHSCPFWAGFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 NAQLARDFQQCSL----EGKVCVCCPSVPLLRPCPESGQELKVAP-NSTCDEARGALKNL
::::. ... :.: .::::: : . :. ::. : . .:. .: .::.:
CCDS45 NAQLVNSLEGCQLIKFDSVEVCVCCELQHQSSGCSNLGETLKLNPLQENCNAVRLTLKDL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 LFSVCGLTICAAIICTLPAIVCCIQIFSLDLVHTLAPERSVSGPLGPLGCTSPPPAPLLH
:::::.:.. ..:.:.: . .::.:. : :... . :.:: : .: :..: . .::
CCDS45 LFSVCALNVLSTIVCALATAMCCMQMVSSDVLQMFLPQRS--HPANPT-CVTPH-GTVLH
180 190 200 210 220 230
240 250 260 270 280
pF1KE1 TMLDLEEFVPPVPPPPYYPPEYTCSSETDAQ------------SITYNGSMDSPVPLYPT
::..::.::.::::::::::::. :.:: . :. ...:: :::.
CCDS45 QTLDFDEFIPPLPPPPYYPPEYTCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPA
240 250 260 270 280 290
290 300 310 320 330
pF1KE1 DCPPSYEAVMGLRGDSQATLFDPQLHDGSCICERVAS--IVDVSMDSGSLVLSAIGDLPG
. :: ::::.: ::.: . :. ..: ... . : :: ::..: :
CCDS45 ELPPPYEAVVGQPPASQVTSIGQQVAESSSGDPNTSAGFSTPVPADSTSLLVSE-GTATP
300 310 320 330 340 350
340 350 360 370 380 390
pF1KE1 GSSPSEDSCLLELQGSVRSVDYVLFRSIQRSRAGYCLSLDCGLRGPFEESPLPRRPPRAA
::::: :. . :. . .: :. : :. . . : : : :..
CCDS45 GSSPSPDGPV----GAPAPSEPAL-------PPGHVSPEDPGMGSQVQ--PGPGRVSRST
360 370 380 390
400 410 420 430 440 450
pF1KE1 RSYS-CSAPEAPPPLGAPTAAR-SCHR-LEGWPPWVGPCFPELRRRVP---RGGGRPAAA
. . :.. : : .. : :: . ::. . : . : . :. ::.
CCDS45 SDPTLCTSSMA----GDASSHRPSCSQDLEAGLSEAVPGSASMSRSATAACRAQLSPAGD
400 410 420 430 440 450
460 470 480 490 500 510
pF1KE1 PPTRAPTRRFSDSSGSLTPPGHRPPHPASPPPLLLPRSHSDPGITTSSDTADFRDLYTKV
: : .: :: : ::. ::: : :. :: : : .:
CCDS45 PDTWKTDQRP-------TPE----PFPATSKE--RPRSLVD-----SKAYADARVLVAKF
460 470 480 490
520 530 540 550 560 570
pF1KE1 LEEEAASVSSADTGLCSEACLFRLARCPSPKLLRARSAEKRRPVPTFQKVPLPSGPAPAH
::
CCDS45 LEHSHCALPTEAQHMVGAMRLAVTNEERLEEEAVFGADVLDQV
500 510 520 530
668 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:06:48 2016 done: Sat Nov 5 21:06:48 2016
Total Scan time: 4.810 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]