Result of FASTA (ccds) for
pF1KE1023
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1023, 774 aa
1>>>pF1KE1023 774 - 774 aa - 774 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.3285+/-0.00115; mu= -19.7133+/- 0.070
mean_var=538.7722+/-111.682, 0's: 0 Z-trim(116.3): 25 B-trim: 467 in 1/53
Lambda= 0.055255
statistics sampled from 16846 (16861) to 16846 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.518), width: 16
Scan time: 4.740
The best scores are: opt bits E(32554)
CCDS14693.2 MAMLD1 gene_id:10046|Hs108|chrX ( 774) 5270 435.1 2.1e-121
CCDS55525.1 MAMLD1 gene_id:10046|Hs108|chrX ( 749) 4875 403.6 6.2e-112
CCDS55526.1 MAMLD1 gene_id:10046|Hs108|chrX ( 998) 3915 327.1 8.5e-89
>>CCDS14693.2 MAMLD1 gene_id:10046|Hs108|chrX (774 aa)
initn: 5270 init1: 5270 opt: 5270 Z-score: 2293.0 bits: 435.1 E(32554): 2.1e-121
Smith-Waterman score: 5270; 99.9% identity (100.0% similar) in 774 aa overlap (1-774:1-774)
10 20 30 40 50 60
pF1KE1 MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGKKPSWMEEEDLSFLYKSSPGRKHQGTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGKKPSWMEEEDLSFLYKSSPGRKHQGTV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAMGPGAHPSTACAELQVPPLTINPSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAMGPGAHPSTACAELQVPPLTINPSPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 AMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEKINSVPAVDQELQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEKINSVPAVDQELQELL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 EELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLASSKEFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLASSKEFA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 SSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 WHHAHQLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 WHHAHQLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 SPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 FGPQSSILANLMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FGPQSSILANLMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 RSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGATEPFTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGATEPFTFG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 NTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATASSTATATLQLQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATASSTATATLQLQQQQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 QQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQGCCHLFAWTSAASSVKPQHQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQGCCHLFAWTSAASSVKPQHQH
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE1 GSSFTSRQDPQPGDVSPSNITHVDKACKLGEARHPQVSLGRQPPSCQALGSESFLPGSSF
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GNSFTSRQDPQPGDVSPSNITHVDKACKLGEARHPQVSLGRQPPSCQALGSESFLPGSSF
670 680 690 700 710 720
730 740 750 760 770
pF1KE1 AHELARVTSSYSTSEAAPWGSWDPKAWRQVPAPLLPSCDATARGTEIRSYGNDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AHELARVTSSYSTSEAAPWGSWDPKAWRQVPAPLLPSCDATARGTEIRSYGNDP
730 740 750 760 770
>>CCDS55525.1 MAMLD1 gene_id:10046|Hs108|chrX (749 aa)
initn: 4874 init1: 4874 opt: 4875 Z-score: 2123.0 bits: 403.6 E(32554): 6.2e-112
Smith-Waterman score: 5032; 96.6% identity (96.8% similar) in 774 aa overlap (1-774:1-749)
10 20 30 40 50 60
pF1KE1 MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGKKPSWMEEEDLSFLYKSSPGRKHQGTV
::::::::::::::::::::::::::::::::: ::
CCDS55 MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESG-------------------------TV
10 20 30
70 80 90 100 110 120
pF1KE1 KRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAMGPGAHPSTACAELQVPPLTINPSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAMGPGAHPSTACAELQVPPLTINPSPA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 AMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEKINSVPAVDQELQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEKINSVPAVDQELQELL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 EELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLASSKEFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLASSKEFA
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE1 SSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE1 WHHAHQLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 WHHAHQLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPF
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE1 SPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQ
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE1 FGPQSSILANLMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FGPQSSILANLMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLI
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE1 RSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGATEPFTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGATEPFTFG
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE1 NTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATASSTATATLQLQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATASSTATATLQLQQQQ
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE1 QQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQGCCHLFAWTSAASSVKPQHQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQGCCHLFAWTSAASSVKPQHQH
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE1 GSSFTSRQDPQPGDVSPSNITHVDKACKLGEARHPQVSLGRQPPSCQALGSESFLPGSSF
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GNSFTSRQDPQPGDVSPSNITHVDKACKLGEARHPQVSLGRQPPSCQALGSESFLPGSSF
640 650 660 670 680 690
730 740 750 760 770
pF1KE1 AHELARVTSSYSTSEAAPWGSWDPKAWRQVPAPLLPSCDATARGTEIRSYGNDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AHELARVTSSYSTSEAAPWGSWDPKAWRQVPAPLLPSCDATARGTEIRSYGNDP
700 710 720 730 740
>>CCDS55526.1 MAMLD1 gene_id:10046|Hs108|chrX (998 aa)
initn: 3914 init1: 3914 opt: 3915 Z-score: 1707.7 bits: 327.1 E(32554): 8.5e-89
Smith-Waterman score: 4080; 87.9% identity (91.4% similar) in 717 aa overlap (1-717:1-680)
10 20 30 40 50 60
pF1KE1 MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGKKPSWMEEEDLSFLYKSSPGRKHQGTV
::::::::::::::::::::::::::::::::: ::
CCDS55 MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESG-------------------------TV
10 20 30
70 80 90 100 110 120
pF1KE1 KRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAMGPGAHPSTACAELQVPPLTINPSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAMGPGAHPSTACAELQVPPLTINPSPA
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE1 AMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEKINSVPAVDQELQELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEKINSVPAVDQELQELL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE1 EELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLASSKEFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLASSKEFA
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE1 SSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQ
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE1 WHHAHQLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 WHHAHQLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPF
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE1 SPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SPQSLMVSCMSSNTLSGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQ
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE1 FGPQSSILANLMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FGPQSSILANLMSSTIKTPQGHLMSALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLI
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE1 RSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGATEPFTFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGATEPFTFG
460 470 480 490 500 510
550 560 570 580 590 600
pF1KE1 NTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATASSTATATLQLQQQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATASSTATATLQLQQQQ
520 530 540 550 560 570
610 620 630 640 650 660
pF1KE1 QQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQGCCHLFAWTSAASSVKPQHQH
::::::::::::::::::::::::::::::::::::::: . :. .. :..:.
CCDS55 QQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQQEEQ----RSGLMAMTPERQN
580 590 600 610 620 630
670 680 690 700 710 720
pF1KE1 GSSFTSRQDPQPGDVSPSNITHVDKACKLGEARHPQVSLGRQPPSCQALGSESFLPGSSF
.. :.: .: .. ..: . :. .: :. : .:: .: .... ::
CCDS55 --AYISQQ-MSPFEAVQEQVT---SKCSRIKASPPS-SKHLMPPRT-GLLQNNLSPGMIP
640 650 660 670 680
730 740 750 760 770
pF1KE1 AHELARVTSSYSTSEAAPWGSWDPKAWRQVPAPLLPSCDATARGTEIRSYGNDP
CCDS55 LTRHQSCEGMGVISPTLGKRQGIFTSSPQCPILSHSGQTPLGRLDSVCQHMQSPKATPPE
690 700 710 720 730 740
774 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:26:37 2016 done: Sat Nov 5 07:26:38 2016
Total Scan time: 4.740 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]