Result of FASTA (omim) for
pF1KE1038
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1038, 672 aa
1>>>pF1KE1038 672 - 672 aa - 672 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1638+/-0.000454; mu= 15.0101+/- 0.028
mean_var=79.6404+/-15.983, 0's: 0 Z-trim(110.7): 24 B-trim: 784 in 1/50
Lambda= 0.143717
statistics sampled from 19128 (19146) to 19128 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.224), width: 16
Scan time: 11.200
The best scores are: opt bits E(85289)
NP_060660 (OMIM: 607590,615984) Bardet-Biedl syndr ( 672) 4410 924.7 0
NP_789794 (OMIM: 607590,615984) Bardet-Biedl syndr ( 715) 4410 924.7 0
XP_005263163 (OMIM: 607590,615984) PREDICTED: Bard ( 716) 4398 922.2 0
XP_016863846 (OMIM: 607590,615984) PREDICTED: Bard ( 660) 3310 696.6 7.4e-200
XP_016863847 (OMIM: 607590,615984) PREDICTED: Bard ( 618) 3298 694.1 3.9e-199
XP_011530381 (OMIM: 607590,615984) PREDICTED: Bard ( 731) 3090 651.0 4.4e-186
XP_011530382 (OMIM: 607590,615984) PREDICTED: Bard ( 730) 3079 648.8 2.1e-185
XP_011530383 (OMIM: 607590,615984) PREDICTED: Bard ( 676) 1990 422.9 1.9e-117
>>NP_060660 (OMIM: 607590,615984) Bardet-Biedl syndrome (672 aa)
initn: 4410 init1: 4410 opt: 4410 Z-score: 4941.5 bits: 924.7 E(85289): 0
Smith-Waterman score: 4410; 100.0% identity (100.0% similar) in 672 aa overlap (1-672:1-672)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 MYAVEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MYAVEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 SYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQER
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 ENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 DKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 CQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 CQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGEC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 VTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 SVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEY
610 620 630 640 650 660
670
pF1KE1 KKQPAHLERLYG
::::::::::::
NP_060 KKQPAHLERLYG
670
>>NP_789794 (OMIM: 607590,615984) Bardet-Biedl syndrome (715 aa)
initn: 4410 init1: 4410 opt: 4410 Z-score: 4941.1 bits: 924.7 E(85289): 0
Smith-Waterman score: 4410; 100.0% identity (100.0% similar) in 672 aa overlap (1-672:1-672)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 MYAVEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 MYAVEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 ILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 SYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 SYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQER
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 ENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 ENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 DKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 DKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 CQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 CQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGEC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE1 VTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 VTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE1 SVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_789 SVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEY
610 620 630 640 650 660
670
pF1KE1 KKQPAHLERLYG
::::::::::::
NP_789 KKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQNALISFFDAA
670 680 690 700 710
>>XP_005263163 (OMIM: 607590,615984) PREDICTED: Bardet-B (716 aa)
initn: 4396 init1: 3087 opt: 4398 Z-score: 4927.6 bits: 922.2 E(85289): 0
Smith-Waterman score: 4398; 99.9% identity (99.9% similar) in 673 aa overlap (1-672:1-673)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 MYAVEVPGPPTVLALHNGNG-GDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRG
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
XP_005 MYAVEVPGPPTVLALHNGNGVGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 GILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGK
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 DSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 RENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLD
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE1 VDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPK
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE1 TCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KE1 CVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINE
550 560 570 580 590 600
600 610 620 630 640 650
pF1KE1 VSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEE
610 620 630 640 650 660
660 670
pF1KE1 YKKQPAHLERLYG
:::::::::::::
XP_005 YKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQNALISFFDAA
670 680 690 700 710
>>XP_016863846 (OMIM: 607590,615984) PREDICTED: Bardet-B (660 aa)
initn: 3310 init1: 3310 opt: 3310 Z-score: 3709.0 bits: 696.6 E(85289): 7.4e-200
Smith-Waterman score: 3906; 91.8% identity (91.8% similar) in 672 aa overlap (1-672:1-617)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 MYAVEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MYAVEVPGPPTVLALHNGNGGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 ILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGKD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 SYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQER
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 ENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLDV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE1 DKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPKT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE1 CQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGEC
::::::::::::::::::::::::
XP_016 CQVRQYHIKPLSLHQRTHFIDHDR------------------------------------
490 500
550 560 570 580 590 600
pF1KE1 VTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEV
:::::::::::::::::::::::::::::::::::::::::
XP_016 -------------------KGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEV
510 520 530 540
610 620 630 640 650 660
pF1KE1 SVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEEY
550 560 570 580 590 600
670
pF1KE1 KKQPAHLERLYG
::::::::::::
XP_016 KKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQNALISFFDAA
610 620 630 640 650 660
>>XP_016863847 (OMIM: 607590,615984) PREDICTED: Bardet-B (618 aa)
initn: 3296 init1: 1987 opt: 3298 Z-score: 3696.0 bits: 694.1 E(85289): 3.9e-199
Smith-Waterman score: 3894; 91.7% identity (91.7% similar) in 673 aa overlap (1-672:1-618)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220 230
pF1KE1 MYAVEVPGPPTVLALHNGNG-GDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRG
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
XP_016 MYAVEVPGPPTVLALHNGNGVGDSGEDLLFGTSDGKLALIQITTSKPVRKWEIQNEKKRG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 GILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQMLSESVTSIQGGCVGK
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 DSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSLRNELEHLQYKVLQE
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 RENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAIDNVLIQSDVPIDLLD
370 380 390 400 410 420
420 430 440 450 460 470
pF1KE1 VDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQYGTLQAYVTPRIQPK
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE1 TCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVVFCLPEVPEKPPAGE
:::::::::::::::::::::::::
XP_016 TCQVRQYHIKPLSLHQRTHFIDHDR-----------------------------------
490 500
540 550 560 570 580 590
pF1KE1 CVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINE
::::::::::::::::::::::::::::::::::::::::
XP_016 --------------------KGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINE
510 520 530 540
600 610 620 630 640 650
pF1KE1 VSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPEYHCILEEADHLQEE
550 560 570 580 590 600
660 670
pF1KE1 YKKQPAHLERLYG
:::::::::::::
XP_016 YKKQPAHLERLYG
610
>>XP_011530381 (OMIM: 607590,615984) PREDICTED: Bardet-B (731 aa)
initn: 3090 init1: 3090 opt: 3090 Z-score: 3461.8 bits: 651.0 E(85289): 4.4e-186
Smith-Waterman score: 4368; 97.7% identity (97.7% similar) in 688 aa overlap (1-672:1-688)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220
pF1KE1 MYAVEVPGPPTVLALHNGNGG----------------DSGEDLLFGTSDGKLALIQITTS
::::::::::::::::::::: :::::::::::::::::::::::
XP_011 MYAVEVPGPPTVLALHNGNGGNQDFIFHKSTMCFNIGDSGEDLLFGTSDGKLALIQITTS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE1 KPVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQM
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE1 LSESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISS
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE1 LRNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAI
370 380 390 400 410 420
410 420 430 440 450 460
pF1KE1 DNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQ
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE1 YGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWV
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE1 VFCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VFCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEA
550 560 570 580 590 600
590 600 610 620 630 640
pF1KE1 TKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIP
610 620 630 640 650 660
650 660 670
pF1KE1 EYHCILEEADHLQEEYKKQPAHLERLYG
::::::::::::::::::::::::::::
XP_011 EYHCILEEADHLQEEYKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYD
670 680 690 700 710 720
>>XP_011530382 (OMIM: 607590,615984) PREDICTED: Bardet-B (730 aa)
initn: 3079 init1: 3079 opt: 3079 Z-score: 3449.5 bits: 648.8 E(85289): 2.1e-185
Smith-Waterman score: 4370; 97.8% identity (97.8% similar) in 687 aa overlap (1-672:1-687)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220
pF1KE1 MYAVEVPGPPTVLALHNGNGG---------------DSGEDLLFGTSDGKLALIQITTSK
::::::::::::::::::::: ::::::::::::::::::::::::
XP_011 MYAVEVPGPPTVLALHNGNGGNQDFIFHKSTMCFNSDSGEDLLFGTSDGKLALIQITTSK
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE1 PVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQML
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE1 SESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISSL
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE1 RNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAID
370 380 390 400 410 420
410 420 430 440 450 460
pF1KE1 NVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQY
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE1 GTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWVV
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE1 FCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEAT
550 560 570 580 590 600
590 600 610 620 630 640
pF1KE1 KRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIPE
610 620 630 640 650 660
650 660 670
pF1KE1 YHCILEEADHLQEEYKKQPAHLERLYG
:::::::::::::::::::::::::::
XP_011 YHCILEEADHLQEEYKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYDQ
670 680 690 700 710 720
>>XP_011530383 (OMIM: 607590,615984) PREDICTED: Bardet-B (676 aa)
initn: 2085 init1: 1990 opt: 1990 Z-score: 2229.7 bits: 422.9 E(85289): 1.9e-117
Smith-Waterman score: 3864; 89.7% identity (89.7% similar) in 688 aa overlap (1-672:1-633)
10 20 30 40 50 60
pF1KE1 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDLILNRMDYLQVGVTSQKTMKLIPASRHRATQKVVIGDHDGVVMCFGMKKGEAAAVFKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPGPKIARLELGGVINTPQEKIFIAAASEIRGFTKRGKQFLSFETNLTESIKAMHISGSD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLSRITPVLACQDRVLRVLQGSDV
130 140 150 160 170 180
190 200 210 220
pF1KE1 MYAVEVPGPPTVLALHNGNGG----------------DSGEDLLFGTSDGKLALIQITTS
::::::::::::::::::::: :::::::::::::::::::::::
XP_011 MYAVEVPGPPTVLALHNGNGGNQDFIFHKSTMCFNIGDSGEDLLFGTSDGKLALIQITTS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE1 KPVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPVRKWEIQNEKKRGGILCIDSFDIVGDGVKDLLVGRDDGMVEVYSFDNANEPVLRFDQM
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE1 LSESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSESVTSIQGGCVGKDSYDEIVVSTYSGWVTGLTTEPIHKESGPGEELKINQEMQNKISS
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE1 LRNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRNELEHLQYKVLQERENYQQSSQSSKAKSAVPSFGINDKFTLNKDDASYSLILEVQTAI
370 380 390 400 410 420
410 420 430 440 450 460
pF1KE1 DNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DNVLIQSDVPIDLLDVDKNSAVVSFSSCDSESNDNFLLATYRCQADTTRLELKIRSIEGQ
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE1 YGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDRPMNTLTLTGQFSFAEVHSWV
::::::::::::::::::::::::::::::::::::::::
XP_011 YGTLQAYVTPRIQPKTCQVRQYHIKPLSLHQRTHFIDHDR--------------------
490 500 510 520
530 540 550 560 570 580
pF1KE1 VFCLPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEA
:::::::::::::::::::::::::
XP_011 -----------------------------------KGEGVFKSDNISTISILKDVLSKEA
530 540
590 600 610 620 630 640
pF1KE1 TKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALKELQIHEGNTNFLIP
550 560 570 580 590 600
650 660 670
pF1KE1 EYHCILEEADHLQEEYKKQPAHLERLYG
::::::::::::::::::::::::::::
XP_011 EYHCILEEADHLQEEYKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDSYD
610 620 630 640 650 660
672 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:41:52 2016 done: Sat Nov 5 07:41:53 2016
Total Scan time: 11.200 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]