FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1042, 501 aa 1>>>pF1KE1042 501 - 501 aa - 501 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7393+/-0.000511; mu= 8.6891+/- 0.031 mean_var=296.6755+/-71.353, 0's: 0 Z-trim(116.0): 42 B-trim: 0 in 0/54 Lambda= 0.074462 statistics sampled from 26759 (26799) to 26759 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.314), width: 16 Scan time: 10.200 The best scores are: opt bits E(85289) XP_011517279 (OMIM: 601895) PREDICTED: TNF recepto ( 501) 3465 386.6 9.2e-107 XP_011517280 (OMIM: 601895) PREDICTED: TNF recepto ( 501) 3465 386.6 9.2e-107 XP_011517278 (OMIM: 601895) PREDICTED: TNF recepto ( 501) 3465 386.6 9.2e-107 NP_066961 (OMIM: 601895) TNF receptor-associated f ( 501) 3465 386.6 9.2e-107 XP_016870584 (OMIM: 601895) PREDICTED: TNF recepto ( 501) 3465 386.6 9.2e-107 XP_011517276 (OMIM: 601895) PREDICTED: TNF recepto ( 501) 3465 386.6 9.2e-107 XP_011517277 (OMIM: 601895) PREDICTED: TNF recepto ( 501) 3465 386.6 9.2e-107 XP_016870583 (OMIM: 601895) PREDICTED: TNF recepto ( 533) 3465 386.6 9.5e-107 XP_011517275 (OMIM: 601895) PREDICTED: TNF recepto ( 556) 3465 386.6 9.7e-107 XP_011535418 (OMIM: 601896,614849) PREDICTED: TNF ( 516) 952 116.6 1.7e-25 NP_005649 (OMIM: 601711) TNF receptor-associated f ( 416) 879 108.7 3.5e-23 NP_001177874 (OMIM: 601711) TNF receptor-associate ( 416) 879 108.7 3.5e-23 NP_001177876 (OMIM: 601711) TNF receptor-associate ( 294) 871 107.6 5.2e-23 XP_011535419 (OMIM: 601896,614849) PREDICTED: TNF ( 512) 838 104.4 8.3e-22 NP_001186356 (OMIM: 601896,614849) TNF receptor-as ( 485) 776 97.7 8.2e-20 XP_011535420 (OMIM: 601896,614849) PREDICTED: TNF ( 485) 776 97.7 8.2e-20 XP_016877108 (OMIM: 601896,614849) PREDICTED: TNF ( 543) 766 96.7 1.8e-19 NP_663778 (OMIM: 601896,614849) TNF receptor-assoc ( 543) 766 96.7 1.8e-19 NP_663777 (OMIM: 601896,614849) TNF receptor-assoc ( 568) 729 92.7 3e-18 XP_016877106 (OMIM: 601896,614849) PREDICTED: TNF ( 568) 729 92.7 3e-18 XP_016877107 (OMIM: 601896,614849) PREDICTED: TNF ( 568) 729 92.7 3e-18 NP_003291 (OMIM: 601896,614849) TNF receptor-assoc ( 568) 729 92.7 3e-18 XP_016857710 (OMIM: 602356) PREDICTED: TNF recepto ( 557) 707 90.4 1.5e-17 NP_001029082 (OMIM: 602356) TNF receptor-associate ( 557) 707 90.4 1.5e-17 NP_665702 (OMIM: 602356) TNF receptor-associated f ( 557) 707 90.4 1.5e-17 NP_004610 (OMIM: 602356) TNF receptor-associated f ( 557) 707 90.4 1.5e-17 XP_011508261 (OMIM: 602356) PREDICTED: TNF recepto ( 568) 689 88.4 5.8e-17 XP_011508262 (OMIM: 602356) PREDICTED: TNF recepto ( 568) 689 88.4 5.8e-17 NP_001306136 (OMIM: 602356) TNF receptor-associate ( 568) 689 88.4 5.8e-17 XP_011508259 (OMIM: 602356) PREDICTED: TNF recepto ( 631) 689 88.5 6.2e-17 XP_011523808 (OMIM: 602464) PREDICTED: TNF recepto ( 454) 416 59.0 3.4e-08 XP_011523807 (OMIM: 602464) PREDICTED: TNF recepto ( 461) 416 59.0 3.5e-08 NP_004286 (OMIM: 602464) TNF receptor-associated f ( 470) 416 59.0 3.5e-08 XP_011523806 (OMIM: 602464) PREDICTED: TNF recepto ( 477) 416 59.0 3.5e-08 XP_011523810 (OMIM: 602464) PREDICTED: TNF recepto ( 352) 405 57.6 6.7e-08 XP_011523809 (OMIM: 602464) PREDICTED: TNF recepto ( 352) 405 57.6 6.7e-08 NP_004611 (OMIM: 602355) TNF receptor-associated f ( 522) 399 57.2 1.3e-07 NP_665802 (OMIM: 602355) TNF receptor-associated f ( 522) 399 57.2 1.3e-07 XP_016877109 (OMIM: 601896,614849) PREDICTED: TNF ( 292) 340 50.5 7.7e-06 >>XP_011517279 (OMIM: 601895) PREDICTED: TNF receptor-as (501 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.7 bits: 386.6 E(85289): 9.2e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA 430 440 450 460 470 480 490 500 pF1KE1 KNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::: XP_011 KNSYVRDDAIFIKAIVDLTGL 490 500 >>XP_011517280 (OMIM: 601895) PREDICTED: TNF receptor-as (501 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.7 bits: 386.6 E(85289): 9.2e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA 430 440 450 460 470 480 490 500 pF1KE1 KNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::: XP_011 KNSYVRDDAIFIKAIVDLTGL 490 500 >>XP_011517278 (OMIM: 601895) PREDICTED: TNF receptor-as (501 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.7 bits: 386.6 E(85289): 9.2e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA 430 440 450 460 470 480 490 500 pF1KE1 KNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::: XP_011 KNSYVRDDAIFIKAIVDLTGL 490 500 >>NP_066961 (OMIM: 601895) TNF receptor-associated facto (501 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.7 bits: 386.6 E(85289): 9.2e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA 430 440 450 460 470 480 490 500 pF1KE1 KNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::: NP_066 KNSYVRDDAIFIKAIVDLTGL 490 500 >>XP_016870584 (OMIM: 601895) PREDICTED: TNF receptor-as (501 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.7 bits: 386.6 E(85289): 9.2e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA 430 440 450 460 470 480 490 500 pF1KE1 KNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::: XP_016 KNSYVRDDAIFIKAIVDLTGL 490 500 >>XP_011517276 (OMIM: 601895) PREDICTED: TNF receptor-as (501 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.7 bits: 386.6 E(85289): 9.2e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA 430 440 450 460 470 480 490 500 pF1KE1 KNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::: XP_011 KNSYVRDDAIFIKAIVDLTGL 490 500 >>XP_011517277 (OMIM: 601895) PREDICTED: TNF receptor-as (501 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.7 bits: 386.6 E(85289): 9.2e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPSDGCTWKGTLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEVQWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERVAMTA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA 430 440 450 460 470 480 490 500 pF1KE1 KNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::: XP_011 KNSYVRDDAIFIKAIVDLTGL 490 500 >>XP_016870583 (OMIM: 601895) PREDICTED: TNF receptor-as (533 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.5 bits: 386.6 E(85289): 9.5e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:33-533) 10 20 30 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEA :::::::::::::::::::::::::::::: XP_016 LEGLQGSLKLCDSASLSLDRRALFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEA 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 KYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSA 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKER 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE1 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE1 KCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQ 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE1 RCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGL 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE1 KDLAMADLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KDLAMADLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKM 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE1 CLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPD 430 440 450 460 470 480 460 470 480 490 500 pF1KE1 VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL 490 500 510 520 530 >>XP_011517275 (OMIM: 601895) PREDICTED: TNF receptor-as (556 aa) initn: 3465 init1: 3465 opt: 3465 Z-score: 2037.3 bits: 386.6 E(85289): 9.7e-107 Smith-Waterman score: 3465; 100.0% identity (100.0% similar) in 501 aa overlap (1-501:56-556) 10 20 30 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEA :::::::::::::::::::::::::::::: XP_011 WESPELRHGQSESPLSSQQTRALFAGVTALMAAASVTPPGSLELLQPGFSKTLLGTKLEA 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE1 KYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSA 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE1 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKER 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE1 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE1 KCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KCRVPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQ 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE1 RCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGL 330 340 350 360 370 380 340 350 360 370 380 390 pF1KE1 KDLAMADLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KDLAMADLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKM 390 400 410 420 430 440 400 410 420 430 440 450 pF1KE1 CLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPD 450 460 470 480 490 500 460 470 480 490 500 pF1KE1 VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL 510 520 530 540 550 >>XP_011535418 (OMIM: 601896,614849) PREDICTED: TNF rece (516 aa) initn: 840 init1: 495 opt: 952 Z-score: 578.6 bits: 116.6 E(85289): 1.7e-25 Smith-Waterman score: 989; 35.1% identity (62.5% similar) in 502 aa overlap (16-501:36-513) 10 20 30 40 pF1KE1 MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACRNVLRRPF : :... .. : .: :: : :. :: : XP_011 KMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKT-VEDKYKCEKCHLVLCSPK 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 QAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPA :..::::.: :.:..:::. .:.:: .:.: .. . : :: .::. .: XP_011 QTECGHRFCESCMAALLSSSSPKCTAC-QESIVKDKV--------FKDNCCKREILALQI 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 VC--PSDGCTWKGTLKEYESCHEGRCPLMLTEC--PACKGLVRLGEKERHLEHECPERSL : : ::. . : . .. : . : : :: : . . :.:. : : XP_011 YCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREA 120 130 140 150 160 170 170 180 190 200 210 pF1KE1 SCRHCRA--PCC---GAD--VKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRV .: ::.. : :.. .:::. .. .... .. . .. : . XP_011 TCSHCKSQVPMIALQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKS 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 PCRFHAIGCLETVEGEKQQE----HEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQ .: : .: :.:.: .: . : :: ...: : : . . . . XP_011 IQSLHNQICSFEIEIERQKEMLRNNESKIL--HLQRVIDSQAEKLKELDKEIRPFRQNWE 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE1 RCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGL . .:..... ...: : :.: : .: .:. : : :.... .. ... XP_011 EADSMKSSVESLQNRVT----ELESVDKSAGQVARNTGL-------LESQLSRHDQMLSV 300 310 320 330 340 340 350 360 370 380 390 pF1KE1 KDLAMADLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKM .:. .::.. . .:...:.::.:::: :. :..:::: :. ...: :::. .:::: XP_011 HDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKM 350 360 370 380 390 400 400 410 420 430 440 pF1KE1 CLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQ-NNREHVIDAFRP : :.:::::: :.:::::::::.:.: :::: :::.:::::::.:: ..:.:. :::.: XP_011 CARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKP 410 420 430 440 450 460 450 460 470 480 490 500 pF1KE1 DVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL : .::::..:...::::::::.: . .: ...:..::.::::.::: . : XP_011 DPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDTSDLPDP 470 480 490 500 510 501 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 07:44:19 2016 done: Sat Nov 5 07:44:21 2016 Total Scan time: 10.200 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]