Result of FASTA (omim) for
pF1KE1049
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1049, 225 aa
1>>>pF1KE1049 225 - 225 aa - 225 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8801+/-0.00034; mu= 17.3256+/- 0.022
mean_var=81.6277+/-16.623, 0's: 0 Z-trim(116.7): 399 B-trim: 561 in 1/51
Lambda= 0.141957
statistics sampled from 27650 (28106) to 27650 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.33), width: 16
Scan time: 4.180
The best scores are: opt bits E(85289)
NP_006825 (OMIM: 612906) ras-related protein Rab-3 ( 225) 1504 317.1 1.5e-86
NP_071732 (OMIM: 606281) ras-related protein Rab-3 ( 211) 922 197.9 1.1e-50
XP_016872945 (OMIM: 606281) PREDICTED: ras-related ( 177) 840 181.0 1.1e-45
XP_016872944 (OMIM: 606281) PREDICTED: ras-related ( 177) 840 181.0 1.1e-45
XP_005245627 (OMIM: 603949) PREDICTED: ras-related ( 203) 713 155.1 8.1e-38
XP_005245626 (OMIM: 603949) PREDICTED: ras-related ( 203) 713 155.1 8.1e-38
NP_001129134 (OMIM: 603949) ras-related protein Ra ( 203) 713 155.1 8.1e-38
XP_005245628 (OMIM: 603949) PREDICTED: ras-related ( 203) 713 155.1 8.1e-38
NP_003920 (OMIM: 603949) ras-related protein Rab-7 ( 203) 713 155.1 8.1e-38
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 451 101.4 1.1e-21
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 432 97.5 1.7e-20
XP_016858238 (OMIM: 603949) PREDICTED: ras-related ( 179) 424 95.8 4.9e-20
XP_016858237 (OMIM: 603949) PREDICTED: ras-related ( 179) 424 95.8 4.9e-20
XP_016858239 (OMIM: 603949) PREDICTED: ras-related ( 179) 424 95.8 4.9e-20
NP_001129135 (OMIM: 603949) ras-related protein Ra ( 179) 424 95.8 4.9e-20
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 402 91.4 1.2e-18
NP_004628 (OMIM: 600882,602298) ras-related protei ( 207) 400 91.0 1.6e-18
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 394 89.8 3.8e-18
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 392 89.4 5.7e-18
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 389 88.7 7.7e-18
NP_001129136 (OMIM: 603949) ras-related protein Ra ( 131) 385 87.7 9.9e-18
XP_006711668 (OMIM: 603949) PREDICTED: ras-related ( 131) 385 87.7 9.9e-18
XP_006711669 (OMIM: 603949) PREDICTED: ras-related ( 131) 385 87.7 9.9e-18
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 387 88.3 1.1e-17
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 386 88.1 1.2e-17
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 382 87.3 2.2e-17
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 381 87.1 2.6e-17
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 380 86.9 2.9e-17
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 379 86.7 3.3e-17
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 379 86.7 3.3e-17
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 378 86.5 3.8e-17
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 374 85.7 6.5e-17
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 374 85.7 6.7e-17
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 373 85.5 7.8e-17
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 373 85.5 7.8e-17
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 372 85.3 8.8e-17
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 371 85.1 1e-16
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 367 84.2 1.7e-16
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 365 83.8 2.4e-16
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 364 83.6 2.7e-16
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 364 83.6 2.7e-16
NP_004242 (OMIM: 300284) ras-related protein Rab-9 ( 201) 361 83.0 4e-16
NP_001182257 (OMIM: 300284) ras-related protein Ra ( 201) 361 83.0 4e-16
XP_016885453 (OMIM: 300284) PREDICTED: ras-related ( 201) 361 83.0 4e-16
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 361 83.0 4.1e-16
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 361 83.0 4.3e-16
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 358 82.4 6.3e-16
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 362 83.6 6.5e-16
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 362 83.6 6.5e-16
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 362 83.8 8.6e-16
>>NP_006825 (OMIM: 612906) ras-related protein Rab-32 [H (225 aa)
initn: 1504 init1: 1504 opt: 1504 Z-score: 1674.9 bits: 317.1 E(85289): 1.5e-86
Smith-Waterman score: 1504; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
130 140 150 160 170 180
190 200 210 220
pF1KE1 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
:::::::::::::::::::::::::::::::::::::::::::::
NP_006 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
190 200 210 220
>>NP_071732 (OMIM: 606281) ras-related protein Rab-38 [H (211 aa)
initn: 911 init1: 720 opt: 922 Z-score: 1031.1 bits: 197.9 E(85289): 1.1e-50
Smith-Waterman score: 922; 66.8% identity (87.0% similar) in 208 aa overlap (18-224:3-208)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
::. .:::.:.::::.::::::::::::::: ::.::::::::
NP_071 MQAPH-KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:: .:.::::::::::::::::::::::.::.:::.:::..: .::::: ::
NP_071 DFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKW
50 60 70 80 90 100
130 140 150 160 170
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPS-QVDQFCKEHGFAGWFETSAKDNI
:.:::::. ::::.:. .:::::::::.:: .. . ..:::::::::.::::::::.::
NP_071 KNDLDSKLSLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENI
110 120 130 140 150 160
180 190 200 210 220
pF1KE1 NIEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
::.::.: ::..::.:. .. : . : .: . .. . : :
NP_071 NIDEASRCLVKHILANECDL-MESIEPDVVKPHLTSTKVASCSGCAKS
170 180 190 200 210
>>XP_016872945 (OMIM: 606281) PREDICTED: ras-related pro (177 aa)
initn: 841 init1: 720 opt: 840 Z-score: 941.3 bits: 181.0 E(85289): 1.1e-45
Smith-Waterman score: 840; 76.2% identity (93.1% similar) in 160 aa overlap (18-176:3-161)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
::. .:::.:.::::.::::::::::::::: ::.::::::::
XP_016 MQAPH-KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:: .:.::::::::::::::::::::::.::.:::.:::..: .::::: ::
XP_016 DFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKW
50 60 70 80 90 100
130 140 150 160 170
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPS-QVDQFCKEHGFAGWFETSAKDNI
:.:::::. ::::.:. .:::::::::.:: .. . ..:::::::::.::::::::
XP_016 KNDLDSKLSLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKVLE
110 120 130 140 150 160
180 190 200 210 220
pF1KE1 NIEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
XP_016 VELTLVSSFINTG
170
>>XP_016872944 (OMIM: 606281) PREDICTED: ras-related pro (177 aa)
initn: 841 init1: 720 opt: 840 Z-score: 941.3 bits: 181.0 E(85289): 1.1e-45
Smith-Waterman score: 840; 76.2% identity (93.1% similar) in 160 aa overlap (18-176:3-161)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
::. .:::.:.::::.::::::::::::::: ::.::::::::
XP_016 MQAPH-KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:: .:.::::::::::::::::::::::.::.:::.:::..: .::::: ::
XP_016 DFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKW
50 60 70 80 90 100
130 140 150 160 170
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPS-QVDQFCKEHGFAGWFETSAKDNI
:.:::::. ::::.:. .:::::::::.:: .. . ..:::::::::.::::::::
XP_016 KNDLDSKLSLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKVLE
110 120 130 140 150 160
180 190 200 210 220
pF1KE1 NIEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
XP_016 VELTLVSSFINTG
170
>>XP_005245627 (OMIM: 603949) PREDICTED: ras-related pro (203 aa)
initn: 685 init1: 563 opt: 713 Z-score: 800.0 bits: 155.1 E(85289): 8.1e-38
Smith-Waterman score: 713; 50.0% identity (77.9% similar) in 208 aa overlap (21-225:3-203)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
.:.:::::::.:. .:::::...:: .. ::.::..:.::
XP_005 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:.. .:::::::::::::: .:::.::..: . ..::.. ..:: .:
XP_005 DFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
:.:::::. :::: :.: .::::::: . . : .:.:.: ::.::.:: :::.:.: :
XP_005 KQDLDSKLTLPNGEPVPCLLLANKCDLSP-WAVSRDQIDRFSKENGFTGWTETSVKENKN
110 120 130 140 150 160
190 200 210 220
pF1KE1 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQ---CC
:.:: : :.::.. : .:. ... . . . ..::. ::
XP_005 INEAMRVLIEKMM------RNSTEDIMSLSTQGDYINLQTKSSSWSCC
170 180 190 200
>>XP_005245626 (OMIM: 603949) PREDICTED: ras-related pro (203 aa)
initn: 685 init1: 563 opt: 713 Z-score: 800.0 bits: 155.1 E(85289): 8.1e-38
Smith-Waterman score: 713; 50.0% identity (77.9% similar) in 208 aa overlap (21-225:3-203)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
.:.:::::::.:. .:::::...:: .. ::.::..:.::
XP_005 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:.. .:::::::::::::: .:::.::..: . ..::.. ..:: .:
XP_005 DFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
:.:::::. :::: :.: .::::::: . . : .:.:.: ::.::.:: :::.:.: :
XP_005 KQDLDSKLTLPNGEPVPCLLLANKCDLSP-WAVSRDQIDRFSKENGFTGWTETSVKENKN
110 120 130 140 150 160
190 200 210 220
pF1KE1 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQ---CC
:.:: : :.::.. : .:. ... . . . ..::. ::
XP_005 INEAMRVLIEKMM------RNSTEDIMSLSTQGDYINLQTKSSSWSCC
170 180 190 200
>>NP_001129134 (OMIM: 603949) ras-related protein Rab-7L (203 aa)
initn: 685 init1: 563 opt: 713 Z-score: 800.0 bits: 155.1 E(85289): 8.1e-38
Smith-Waterman score: 713; 50.0% identity (77.9% similar) in 208 aa overlap (21-225:3-203)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
.:.:::::::.:. .:::::...:: .. ::.::..:.::
NP_001 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:.. .:::::::::::::: .:::.::..: . ..::.. ..:: .:
NP_001 DFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
:.:::::. :::: :.: .::::::: . . : .:.:.: ::.::.:: :::.:.: :
NP_001 KQDLDSKLTLPNGEPVPCLLLANKCDLSP-WAVSRDQIDRFSKENGFTGWTETSVKENKN
110 120 130 140 150 160
190 200 210 220
pF1KE1 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQ---CC
:.:: : :.::.. : .:. ... . . . ..::. ::
NP_001 INEAMRVLIEKMM------RNSTEDIMSLSTQGDYINLQTKSSSWSCC
170 180 190 200
>>XP_005245628 (OMIM: 603949) PREDICTED: ras-related pro (203 aa)
initn: 685 init1: 563 opt: 713 Z-score: 800.0 bits: 155.1 E(85289): 8.1e-38
Smith-Waterman score: 713; 50.0% identity (77.9% similar) in 208 aa overlap (21-225:3-203)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
.:.:::::::.:. .:::::...:: .. ::.::..:.::
XP_005 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:.. .:::::::::::::: .:::.::..: . ..::.. ..:: .:
XP_005 DFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
:.:::::. :::: :.: .::::::: . . : .:.:.: ::.::.:: :::.:.: :
XP_005 KQDLDSKLTLPNGEPVPCLLLANKCDLSP-WAVSRDQIDRFSKENGFTGWTETSVKENKN
110 120 130 140 150 160
190 200 210 220
pF1KE1 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQ---CC
:.:: : :.::.. : .:. ... . . . ..::. ::
XP_005 INEAMRVLIEKMM------RNSTEDIMSLSTQGDYINLQTKSSSWSCC
170 180 190 200
>>NP_003920 (OMIM: 603949) ras-related protein Rab-7L1 i (203 aa)
initn: 685 init1: 563 opt: 713 Z-score: 800.0 bits: 155.1 E(85289): 8.1e-38
Smith-Waterman score: 713; 50.0% identity (77.9% similar) in 208 aa overlap (21-225:3-203)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
.:.:::::::.:. .:::::...:: .. ::.::..:.::
NP_003 MGSRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGV
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:::::::.:.. .:::::::::::::: .:::.::..: . ..::.. ..:: .:
NP_003 DFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRW
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
:.:::::. :::: :.: .::::::: . . : .:.:.: ::.::.:: :::.:.: :
NP_003 KQDLDSKLTLPNGEPVPCLLLANKCDLSP-WAVSRDQIDRFSKENGFTGWTETSVKENKN
110 120 130 140 150 160
190 200 210 220
pF1KE1 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQ---CC
:.:: : :.::.. : .:. ... . . . ..::. ::
NP_003 INEAMRVLIEKMM------RNSTEDIMSLSTQGDYINLQTKSSSWSCC
170 180 190 200
>>NP_057215 (OMIM: 612672) ras-related protein Rab-10 [H (200 aa)
initn: 445 init1: 177 opt: 451 Z-score: 510.0 bits: 101.4 E(85289): 1.1e-21
Smith-Waterman score: 451; 36.5% identity (68.3% similar) in 208 aa overlap (18-225:2-200)
10 20 30 40 50 60
pF1KE1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
: .: . :::.:.::. ::::: .. :. . :. . .:::.
NP_057 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGI
10 20 30 40
70 80 90 100 110 120
pF1KE1 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
:: .:... ... ..::.:: :::::: ..: ::. :.: ..:.::. ...:: . ::
NP_057 DFKIKTVELQGKK-IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN
..: ... . .::.::::.. .. .:. .:::. .:::::: :::
NP_057 LRNIDEHAN----EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANIN
110 120 130 140 150
190 200 210 220
pF1KE1 IEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
::.: :.: :: .. : .: . ... ... . ::.::
NP_057 IEKAFLTLAEDIL---RKTPVKEPNSENVDISSGGGVTGWKSKCC
160 170 180 190 200
225 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:48:02 2016 done: Sat Nov 5 07:48:03 2016
Total Scan time: 4.180 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]