Result of FASTA (omim) for
pF1KE1136
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1136, 357 aa
1>>>pF1KE1136 357 - 357 aa - 357 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2268+/-0.000413; mu= 16.9742+/- 0.025
mean_var=78.5444+/-15.989, 0's: 0 Z-trim(111.1): 57 B-trim: 0 in 0/51
Lambda= 0.144716
statistics sampled from 19583 (19630) to 19583 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.599), E-opt: 0.2 (0.23), width: 16
Scan time: 6.550
The best scores are: opt bits E(85289)
NP_003970 (OMIM: 604138) retinoic acid-induced pro ( 357) 2379 506.6 3.3e-143
NP_061124 (OMIM: 607437) G-protein coupled recepto ( 345) 957 209.7 7.6e-54
XP_005253478 (OMIM: 607437) PREDICTED: G-protein c ( 345) 957 209.7 7.6e-54
XP_016875071 (OMIM: 607437) PREDICTED: G-protein c ( 345) 957 209.7 7.6e-54
XP_016875072 (OMIM: 607437) PREDICTED: G-protein c ( 300) 897 197.2 4e-50
XP_006721114 (OMIM: 605948) PREDICTED: G-protein c ( 403) 652 146.1 1.3e-34
NP_057319 (OMIM: 605948) G-protein coupled recepto ( 403) 652 146.1 1.3e-34
XP_006721115 (OMIM: 605948) PREDICTED: G-protein c ( 403) 652 146.1 1.3e-34
NP_001291700 (OMIM: 605948) G-protein coupled rece ( 534) 652 146.2 1.6e-34
NP_061123 (OMIM: 605949) G-protein coupled recepto ( 453) 478 109.8 1.2e-23
NP_071319 (OMIM: 605949) G-protein coupled recepto ( 486) 478 109.9 1.3e-23
XP_005257571 (OMIM: 605949) PREDICTED: G-protein c ( 496) 478 109.9 1.3e-23
XP_016880345 (OMIM: 605949) PREDICTED: G-protein c ( 541) 478 109.9 1.4e-23
XP_016880344 (OMIM: 605949) PREDICTED: G-protein c ( 542) 478 109.9 1.4e-23
XP_005257569 (OMIM: 605949) PREDICTED: G-protein c ( 551) 478 109.9 1.4e-23
>>NP_003970 (OMIM: 604138) retinoic acid-induced protein (357 aa)
initn: 2379 init1: 2379 opt: 2379 Z-score: 2692.0 bits: 506.6 E(85289): 3.3e-143
Smith-Waterman score: 2379; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:1-357)
10 20 30 40 50 60
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRRW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVENRAY
250 260 270 280 290 300
310 320 330 340 350
pF1KE1 SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS
310 320 330 340 350
>>NP_061124 (OMIM: 607437) G-protein coupled receptor fa (345 aa)
initn: 886 init1: 507 opt: 957 Z-score: 1087.7 bits: 209.7 E(85289): 7.6e-54
Smith-Waterman score: 957; 45.7% identity (74.2% similar) in 337 aa overlap (17-349:12-341)
10 20 30 40 50 60
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
:. ::: :::.::..: :.:... ..:.. .:. :.:: .
NP_061 MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCS
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
. ..::::.::::.:::.:::.::::: :. .:.:.:.::::.::..::::::::: .:.
NP_061 QWNVLPTQLLFLLSVLGLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
::::: .: .:: .:.: ::.: .:: ::..: :.: .: ... . : :::.:
NP_061 KLVRGCVSFSWTTILCIAIGCSLLQIIIATEYVTLIMTRGM--MFVNMTPCQLNVDFVVL
120 130 140 150 160 170
190 200 210 220 230
pF1KE1 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLML--PDFDR
:.::::::::::..:. :::: .::.:: :..:.:.:: :::.::..:. :.:.:
NP_061 LVYVLFLMALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 R--WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVE
. ::: .. ::..:.::::: :. ::. .: .. .. :.. : ..:. ::
NP_061 QPQWDDPVVCIALVTNAWVFLLLYIVPELCILYRS-CRQECPLQGNACPVTAYQHSFQVE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 NRAYSQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEG
:. :. . ..: :: :. . :.: .: :. : .: ::.:. :: .:
NP_061 NQELSRARDSDGAEE--DVALTSYGTPIQPQTVDPTQECFIPQAKL--SPQQDAGGV
300 310 320 330 340
pF1KE1 S
>>XP_005253478 (OMIM: 607437) PREDICTED: G-protein coupl (345 aa)
initn: 886 init1: 507 opt: 957 Z-score: 1087.7 bits: 209.7 E(85289): 7.6e-54
Smith-Waterman score: 957; 45.7% identity (74.2% similar) in 337 aa overlap (17-349:12-341)
10 20 30 40 50 60
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
:. ::: :::.::..: :.:... ..:.. .:. :.:: .
XP_005 MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCS
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
. ..::::.::::.:::.:::.::::: :. .:.:.:.::::.::..::::::::: .:.
XP_005 QWNVLPTQLLFLLSVLGLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
::::: .: .:: .:.: ::.: .:: ::..: :.: .: ... . : :::.:
XP_005 KLVRGCVSFSWTTILCIAIGCSLLQIIIATEYVTLIMTRGM--MFVNMTPCQLNVDFVVL
120 130 140 150 160 170
190 200 210 220 230
pF1KE1 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLML--PDFDR
:.::::::::::..:. :::: .::.:: :..:.:.:: :::.::..:. :.:.:
XP_005 LVYVLFLMALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 R--WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVE
. ::: .. ::..:.::::: :. ::. .: .. .. :.. : ..:. ::
XP_005 QPQWDDPVVCIALVTNAWVFLLLYIVPELCILYRS-CRQECPLQGNACPVTAYQHSFQVE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 NRAYSQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEG
:. :. . ..: :: :. . :.: .: :. : .: ::.:. :: .:
XP_005 NQELSRARDSDGAEE--DVALTSYGTPIQPQTVDPTQECFIPQAKL--SPQQDAGGV
300 310 320 330 340
pF1KE1 S
>>XP_016875071 (OMIM: 607437) PREDICTED: G-protein coupl (345 aa)
initn: 886 init1: 507 opt: 957 Z-score: 1087.7 bits: 209.7 E(85289): 7.6e-54
Smith-Waterman score: 957; 45.7% identity (74.2% similar) in 337 aa overlap (17-349:12-341)
10 20 30 40 50 60
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
:. ::: :::.::..: :.:... ..:.. .:. :.:: .
XP_016 MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCS
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
. ..::::.::::.:::.:::.::::: :. .:.:.:.::::.::..::::::::: .:.
XP_016 QWNVLPTQLLFLLSVLGLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
::::: .: .:: .:.: ::.: .:: ::..: :.: .: ... . : :::.:
XP_016 KLVRGCVSFSWTTILCIAIGCSLLQIIIATEYVTLIMTRGM--MFVNMTPCQLNVDFVVL
120 130 140 150 160 170
190 200 210 220 230
pF1KE1 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLML--PDFDR
:.::::::::::..:. :::: .::.:: :..:.:.:: :::.::..:. :.:.:
XP_016 LVYVLFLMALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 R--WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVE
. ::: .. ::..:.::::: :. ::. .: .. .. :.. : ..:. ::
XP_016 QPQWDDPVVCIALVTNAWVFLLLYIVPELCILYRS-CRQECPLQGNACPVTAYQHSFQVE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 NRAYSQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEG
:. :. . ..: :: :. . :.: .: :. : .: ::.:. :: .:
XP_016 NQELSRARDSDGAEE--DVALTSYGTPIQPQTVDPTQECFIPQAKL--SPQQDAGGV
300 310 320 330 340
pF1KE1 S
>>XP_016875072 (OMIM: 607437) PREDICTED: G-protein coupl (300 aa)
initn: 886 init1: 507 opt: 897 Z-score: 1020.8 bits: 197.2 E(85289): 4e-50
Smith-Waterman score: 897; 47.4% identity (76.6% similar) in 291 aa overlap (17-303:12-299)
10 20 30 40 50 60
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATAGVVTSVAFMLTLPILVCKVQDSN
:. ::: :::.::..: :.:... ..:.. .:. :.:: .
XP_016 MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCS
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 RRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTRFFLFGILFSICFSCLLAHAVSLT
. ..::::.::::.:::.:::.::::: :. .:.:.:.::::.::..::::::::: .:.
XP_016 QWNVLPTQLLFLLSVLGLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 KLVRGRKPLSLLVILGLAVGFSLVQDVIAIEYIVLTMNRTNVNVFSELSAPRRNEDFVLL
::::: .: .:: .:.: ::.: .:: ::..: :.: .: ... . : :::.:
XP_016 KLVRGCVSFSWTTILCIAIGCSLLQIIIATEYVTLIMTRGM--MFVNMTPCQLNVDFVVL
120 130 140 150 160 170
190 200 210 220 230
pF1KE1 LTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLTMLLSIAIWVAWITLLML--PDFDR
:.::::::::::..:. :::: .::.:: :..:.:.:: :::.::..:. :.:.:
XP_016 LVYVLFLMALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 R--WDDTILSSALAANGWVFLLAYVSPEFWLLTKQRNPMDYPVEDAFCKPQLVKKSYGVE
. ::: .. ::..:.::::: :. ::. .: .. .. :.. : ..:. ::
XP_016 QPQWDDPVVCIALVTNAWVFLLLYIVPELCILYRSCR-QECPLQGNACPVTAYQHSFQVE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 NRAYSQEEITQGFEETGDTLYAPYSTHFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEG
:. :..
XP_016 NQELSRDC
300
>>XP_006721114 (OMIM: 605948) PREDICTED: G-protein coupl (403 aa)
initn: 586 init1: 404 opt: 652 Z-score: 742.6 bits: 146.1 E(85289): 1.3e-34
Smith-Waterman score: 670; 37.4% identity (66.4% similar) in 321 aa overlap (8-313:36-349)
10 20 30
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATA
:: : .: ::: ::::.:.:: :
XP_006 ERKMRAHQVLTFLLLFVITSVASENASTSRGCGLDLLPQYVSLCDLDAIWGIVVEAVAGA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 GVVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTR
:.. .. .:: : . . ........ . .::::::.::.::::::::: : . .:
XP_006 GALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 FFLFGILFSICFSCLLAHAVSLTKLVR-GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLT
::.:.::..::::::..: . .::: : : . .. :::. . ::: .::.:..:::
XP_006 RFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPAGWQLV-GLALCLMLVQVIIAVEWLVLT
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 MNRTNVNVFSELSAPRRNEDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLT
. : .. . . :::. : : . :...:. .. ::.::.: :: .:: . .:
XP_006 VLRD-----TRPACAYEPMDFVMALIYDMVLLVVTLGLALFTLCGKFKRWKLNGAFLLIT
190 200 210 220 230
220 230 240 250 260
pF1KE1 MLLSIAIWVAWITLLMLPDFDRR----WDDTILSSALAANGWVFLLAYVSPEF---WLLT
.::. :::::.:. .. . . :.: :. .:::.::::.. .. ::. : .
XP_006 AFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIHCTLLPA
240 250 260 270 280 290
270 280 290 300 310 320
pF1KE1 KQRNPMDY-----PV--EDAFCKPQLVKKSYGVENRAYSQEEITQGFEETGDTLYAPYST
:.: .: : : :: . . ..: .::.:.:..: . ... .:
XP_006 LQENTPNYFDTSQPRMRETAFEEDVQLPRAY-MENKAFSMDEHNAALRTAGFPNGSLGKR
300 310 320 330 340 350
330 340 350
pF1KE1 HFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS
XP_006 PSGSLGKRPSAPFRSNVYQPTEMAVVLNGGTIPTAPPSHTGRHLW
360 370 380 390 400
>>NP_057319 (OMIM: 605948) G-protein coupled receptor fa (403 aa)
initn: 586 init1: 404 opt: 652 Z-score: 742.6 bits: 146.1 E(85289): 1.3e-34
Smith-Waterman score: 670; 37.4% identity (66.4% similar) in 321 aa overlap (8-313:36-349)
10 20 30
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATA
:: : .: ::: ::::.:.:: :
NP_057 ERKMRAHQVLTFLLLFVITSVASENASTSRGCGLDLLPQYVSLCDLDAIWGIVVEAVAGA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 GVVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTR
:.. .. .:: : . . ........ . .::::::.::.::::::::: : . .:
NP_057 GALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 FFLFGILFSICFSCLLAHAVSLTKLVR-GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLT
::.:.::..::::::..: . .::: : : . .. :::. . ::: .::.:..:::
NP_057 RFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPAGWQLV-GLALCLMLVQVIIAVEWLVLT
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 MNRTNVNVFSELSAPRRNEDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLT
. : .. . . :::. : : . :...:. .. ::.::.: :: .:: . .:
NP_057 VLRD-----TRPACAYEPMDFVMALIYDMVLLVVTLGLALFTLCGKFKRWKLNGAFLLIT
190 200 210 220 230
220 230 240 250 260
pF1KE1 MLLSIAIWVAWITLLMLPDFDRR----WDDTILSSALAANGWVFLLAYVSPEF---WLLT
.::. :::::.:. .. . . :.: :. .:::.::::.. .. ::. : .
NP_057 AFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIHCTLLPA
240 250 260 270 280 290
270 280 290 300 310 320
pF1KE1 KQRNPMDY-----PV--EDAFCKPQLVKKSYGVENRAYSQEEITQGFEETGDTLYAPYST
:.: .: : : :: . . ..: .::.:.:..: . ... .:
NP_057 LQENTPNYFDTSQPRMRETAFEEDVQLPRAY-MENKAFSMDEHNAALRTAGFPNGSLGKR
300 310 320 330 340 350
330 340 350
pF1KE1 HFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS
NP_057 PSGSLGKRPSAPFRSNVYQPTEMAVVLNGGTIPTAPPSHTGRHLW
360 370 380 390 400
>>XP_006721115 (OMIM: 605948) PREDICTED: G-protein coupl (403 aa)
initn: 586 init1: 404 opt: 652 Z-score: 742.6 bits: 146.1 E(85289): 1.3e-34
Smith-Waterman score: 670; 37.4% identity (66.4% similar) in 321 aa overlap (8-313:36-349)
10 20 30
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATA
:: : .: ::: ::::.:.:: :
XP_006 ERKMRAHQVLTFLLLFVITSVASENASTSRGCGLDLLPQYVSLCDLDAIWGIVVEAVAGA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 GVVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTR
:.. .. .:: : . . ........ . .::::::.::.::::::::: : . .:
XP_006 GALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 FFLFGILFSICFSCLLAHAVSLTKLVR-GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLT
::.:.::..::::::..: . .::: : : . .. :::. . ::: .::.:..:::
XP_006 RFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPAGWQLV-GLALCLMLVQVIIAVEWLVLT
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 MNRTNVNVFSELSAPRRNEDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLT
. : .. . . :::. : : . :...:. .. ::.::.: :: .:: . .:
XP_006 VLRD-----TRPACAYEPMDFVMALIYDMVLLVVTLGLALFTLCGKFKRWKLNGAFLLIT
190 200 210 220 230
220 230 240 250 260
pF1KE1 MLLSIAIWVAWITLLMLPDFDRR----WDDTILSSALAANGWVFLLAYVSPEF---WLLT
.::. :::::.:. .. . . :.: :. .:::.::::.. .. ::. : .
XP_006 AFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIHCTLLPA
240 250 260 270 280 290
270 280 290 300 310 320
pF1KE1 KQRNPMDY-----PV--EDAFCKPQLVKKSYGVENRAYSQEEITQGFEETGDTLYAPYST
:.: .: : : :: . . ..: .::.:.:..: . ... .:
XP_006 LQENTPNYFDTSQPRMRETAFEEDVQLPRAY-MENKAFSMDEHNAALRTAGFPNGSLGKR
300 310 320 330 340 350
330 340 350
pF1KE1 HFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS
XP_006 PSGSLGKRPSAPFRSNVYQPTEMAVVLNGGTIPTAPPSHTGRHLW
360 370 380 390 400
>>NP_001291700 (OMIM: 605948) G-protein coupled receptor (534 aa)
initn: 586 init1: 404 opt: 652 Z-score: 740.9 bits: 146.2 E(85289): 1.6e-34
Smith-Waterman score: 670; 37.4% identity (66.4% similar) in 321 aa overlap (8-313:167-480)
10 20 30
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETVATA
:: : .: ::: ::::.:.:: :
NP_001 ERKMRAHQVLTFLLLFVITSVASENASTSRGCGLDLLPQYVSLCDLDAIWGIVVEAVAGA
140 150 160 170 180 190
40 50 60 70 80 90
pF1KE1 GVVTSVAFMLTLPILVCKVQDSNRRKMLPTQFLFLLGVLGIFGLTFAFIIGLDGSTGPTR
:.. .. .:: : . . ........ . .::::::.::.::::::::: : . .:
NP_001 GALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVR
200 210 220 230 240 250
100 110 120 130 140 150
pF1KE1 FFLFGILFSICFSCLLAHAVSLTKLVR-GRKPLSLLVILGLAVGFSLVQDVIAIEYIVLT
::.:.::..::::::..: . .::: : : . .. :::. . ::: .::.:..:::
NP_001 RFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPAGWQLV-GLALCLMLVQVIIAVEWLVLT
260 270 280 290 300 310
160 170 180 190 200 210
pF1KE1 MNRTNVNVFSELSAPRRNEDFVLLLTYVLFLMALTFLMSSFTFCGSFTGWKRHGAHIYLT
. : .. . . :::. : : . :...:. .. ::.::.: :: .:: . .:
NP_001 VLRD-----TRPACAYEPMDFVMALIYDMVLLVVTLGLALFTLCGKFKRWKLNGAFLLIT
320 330 340 350 360 370
220 230 240 250 260
pF1KE1 MLLSIAIWVAWITLLMLPDFDRR----WDDTILSSALAANGWVFLLAYVSPEF---WLLT
.::. :::::.:. .. . . :.: :. .:::.::::.. .. ::. : .
NP_001 AFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIHCTLLPA
380 390 400 410 420 430
270 280 290 300 310 320
pF1KE1 KQRNPMDY-----PV--EDAFCKPQLVKKSYGVENRAYSQEEITQGFEETGDTLYAPYST
:.: .: : : :: . . ..: .::.:.:..: . ... .:
NP_001 LQENTPNYFDTSQPRMRETAFEEDVQLPRAY-MENKAFSMDEHNAALRTAGFPNGSLGKR
440 450 460 470 480
330 340 350
pF1KE1 HFQLQNQPPQKEFSIPRAHAWPSPYKDYEVKKEGS
NP_001 PSGSLGKRPSAPFRSNVYQPTEMAVVLNGGTIPTAPPSHTGRHLW
490 500 510 520 530
>>NP_061123 (OMIM: 605949) G-protein coupled receptor fa (453 aa)
initn: 752 init1: 456 opt: 478 Z-score: 545.6 bits: 109.8 E(85289): 1.2e-23
Smith-Waterman score: 718; 38.5% identity (64.7% similar) in 374 aa overlap (5-342:39-408)
10 20 30
pF1KE1 MATTVPDGCRNGLKSKYYRLCDKAEAWGIVLETV
:: :: .::. :: :::.. :::::::.:
NP_061 LGARMAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGAWGIVLEAV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 ATAGVVTSVAFMLTLPILVCK---VQDSNRRKMLPTQFLFLLGVLGIFGLTFAFIIGLDG
: ::.::. :.::. ::: . :::...:..: :: .::::.::.: :.:: .. :
NP_061 AGAGIVTT--FVLTI-ILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVVKPDF
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 STGPTRFFLFGILFSICFSCLLAHAVSLTKLVRGRKPLSLLVILGLAVGFSLVQDVIAIE
:: .: ::::.::.:::::: ::. .:. :.: . ::. .:. ..::. .: :
NP_061 STCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVALLLTLVEVIINTE
130 140 150 160 170 180
160 170 180 190 200
pF1KE1 YIVLTMNRT--------NVNVFSELSAPRR--NEDFVLLLTYVLFLMALTFLMSSFTFCG
....:. : : .. ...: : :::. : ::..:. .:: . ..::
NP_061 WLIITLVRGSGEGGPQGNSSAGWAVASPCAIANMDFVMALIYVMLLLLGAFLGAWPALCG
190 200 210 220 230 240
210 220 230 240 250
pF1KE1 SFTGWKRHGAHIYLTMLLSIAIWVAWITLLMLPDFDRR---WDDTILSSALAANGWVFLL
. :..::. . :: :.::::.::.. . .. ::: :. :::::.:.:.:
NP_061 RYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANAWAFVL
250 260 270 280 290 300
260 270 280 290 300
pF1KE1 AYVSPEFWLLTK----QRNPMD-YPVE----DAFCKPQLVKKSYGVENRAYSQEE-----
:: :: .:: : : ::.. ... : : .:. :::.:.:..:
NP_061 FYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQK-GQSMFVENKAFSMDEPVAAK
310 320 330 340 350 360
310 320 330 340 350
pF1KE1 --ITQGFEETGDTLYAPYS-THFQLQNQPPQK---EFSIPRAHAWPSPYKDYEVKKEGS
.. .:. : . :. :.. :... :.. .. .::: :
NP_061 RPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYDIILPRATANSQVMGSANSTLRAED
370 380 390 400 410 420
NP_061 MYSAQSHQAATPPKDGKNSQVFRNPYVWD
430 440 450
357 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 14:55:59 2016 done: Sun Nov 6 14:56:00 2016
Total Scan time: 6.550 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]