FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1345, 264 aa 1>>>pF1KE1345 264 - 264 aa - 264 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9031+/-0.000732; mu= 17.9393+/- 0.044 mean_var=76.1030+/-15.036, 0's: 0 Z-trim(109.7): 13 B-trim: 0 in 0/53 Lambda= 0.147019 statistics sampled from 11065 (11074) to 11065 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.34), width: 16 Scan time: 2.580 The best scores are: opt bits E(32554) CCDS8368.1 NNMT gene_id:4837|Hs108|chr11 ( 264) 1759 382.0 2.4e-106 CCDS5430.1 INMT gene_id:11185|Hs108|chr7 ( 263) 894 198.5 4e-51 CCDS56479.1 INMT gene_id:11185|Hs108|chr7 ( 262) 886 196.8 1.3e-50 CCDS11343.1 PNMT gene_id:5409|Hs108|chr17 ( 282) 592 134.5 8.1e-32 >>CCDS8368.1 NNMT gene_id:4837|Hs108|chr11 (264 aa) initn: 1759 init1: 1759 opt: 1759 Z-score: 2022.8 bits: 382.0 E(32554): 2.4e-106 Smith-Waterman score: 1759; 100.0% identity (100.0% similar) in 264 aa overlap (1-264:1-264) 10 20 30 40 50 60 pF1KE1 MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHSAESQILKHLLKNLFKIFCLDGVKGDLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHSAESQILKHLLKNLFKIFCLDGVKGDLLI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKEPEAFDWSPVVTYVCDLEGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 DIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKEPEAFDWSPVVTYVCDLEGN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCLDAACPDLPTYCRAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 RVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCLDAACPDLPTYCRAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAVEAAVKEAGYTIEWFEVISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 RNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAVEAAVKEAGYTIEWFEVISQ 190 200 210 220 230 240 250 260 pF1KE1 SYSSTMANNEGLFSLVARKLSRPL :::::::::::::::::::::::: CCDS83 SYSSTMANNEGLFSLVARKLSRPL 250 260 >>CCDS5430.1 INMT gene_id:11185|Hs108|chr7 (263 aa) initn: 891 init1: 891 opt: 894 Z-score: 1031.3 bits: 198.5 E(32554): 4e-51 Smith-Waterman score: 894; 53.2% identity (74.5% similar) in 263 aa overlap (1-263:1-263) 10 20 30 40 50 60 pF1KE1 MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHSAESQILKHLLKNLFKIFCLDGVKGDLLI :..:::. : : .:: ::::: ::.: . : :...:: :. : : : :..:: :: CCDS54 MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKEPEAFDWSPVVTYVCDLEGN ::::::::::.:.::.::..:...:..:.: .:::::::::: :.::.:.: ..:.:::: CCDS54 DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCLDAACPDLPTYCRAL . ::::::: :::.:::::: ..::. . :: :::::. : .. :: .: .: :: CCDS54 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAVEAAVKEAGYTIEWFEVISQ ::.::::::: :: .:. ::.:...:: . : .: :: :: .::. :: . : CCDS54 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 190 200 210 220 230 240 250 260 pF1KE1 SYSSTMANNEGLFSLVARKLSRPL ::: : : :.:. .:::: : CCDS54 SYSVTNAANNGVCFIVARKKPGP 250 260 >>CCDS56479.1 INMT gene_id:11185|Hs108|chr7 (262 aa) initn: 885 init1: 747 opt: 886 Z-score: 1022.2 bits: 196.8 E(32554): 1.3e-50 Smith-Waterman score: 886; 53.2% identity (74.5% similar) in 263 aa overlap (1-263:1-262) 10 20 30 40 50 60 pF1KE1 MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHSAESQILKHLLKNLFKIFCLDGVKGDLLI :..:::. : : .:: ::::: ::.: . : :...:: :. : : : :..:: :: CCDS56 MKGGFTGGDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFG-PGLQGDTLI 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 DIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKEPEAFDWSPVVTYVCDLEGN ::::::::::.:.::.::..:...:..:.: .:::::::::: :.::.:.: ..:.:::: CCDS56 DIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGN 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 RVKGPEKEEKLRQAVKQVLKCDVTQSQPLGAVPLPPADCVLSTLCLDAACPDLPTYCRAL . ::::::: :::.:::::: ..::. . :: :::::. : .. :: .: .: :: CCDS56 SGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAAL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 RNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAVEAAVKEAGYTIEWFEVISQ ::.::::::: :: .:. ::.:...:: . : .: :: :: .::. :: . : CCDS56 CNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQLLHSPQ 180 190 200 210 220 230 250 260 pF1KE1 SYSSTMANNEGLFSLVARKLSRPL ::: : : :.:. .:::: : CCDS56 SYSVTNAANNGVCFIVARKKPGP 240 250 260 >>CCDS11343.1 PNMT gene_id:5409|Hs108|chr17 (282 aa) initn: 583 init1: 345 opt: 592 Z-score: 684.7 bits: 134.5 E(32554): 8.1e-32 Smith-Waterman score: 592; 39.7% identity (67.9% similar) in 252 aa overlap (15-260:30-280) 10 20 30 40 pF1KE1 MESGFTSKDTYLSHFNPRDYLEKYYKFGSRHS--AESQILKHLLK :.:: ::.. : : . . . :. CCDS11 MSGADRSPNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYA-PPRGDLCNPNGVGPWKLR 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 NLFKIFCLDGVKGDLLIDIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKEPE : . : :.: :::::::::.::::::: :..:..::. . : ::: .::..:: CCDS11 CLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPG 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 AFDWSPVVTYVCDLEGNRVKGPEKEEKLRQAVKQVLKCDVTQSQPLGA-VPLP-PADCVL ::.:: ..: .::. .::..:: ::.:: :: : ::::: : : ::: .. CCDS11 AFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALV 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 STLCLDAACPDLPTYCRALRNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGREAV :..::.:. ::: .. ::: .. .::.::: :... ::. :.:. :: ... .:...: : CCDS11 SAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEV 180 190 200 210 220 230 230 240 250 260 pF1KE1 EAAVKEAGYTIEWFE--VISQSYSSTMANNEGLFSLVARKLSRPL . :. ..:: .. .. .. .. . . .:.: :.:. CCDS11 REALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL 240 250 260 270 280 264 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:37:45 2016 done: Sun Nov 6 23:37:45 2016 Total Scan time: 2.580 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]