Result of FASTA (omim) for
pF1KE1444
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1444, 274 aa
1>>>pF1KE1444 274 - 274 aa - 274 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9789+/-0.000376; mu= 16.5613+/- 0.023
mean_var=60.3645+/-12.449, 0's: 0 Z-trim(111.7): 28 B-trim: 80 in 1/54
Lambda= 0.165076
statistics sampled from 20336 (20356) to 20336 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.239), width: 16
Scan time: 6.710
The best scores are: opt bits E(85289)
NP_000894 (OMIM: 125860) NAD(P)H dehydrogenase [qu ( 274) 1833 445.0 6.9e-125
NP_001020605 (OMIM: 125860) NAD(P)H dehydrogenase ( 236) 933 230.7 2e-60
NP_001020604 (OMIM: 125860) NAD(P)H dehydrogenase ( 240) 926 229.0 6.5e-60
NP_000895 (OMIM: 114480,160998) ribosyldihydronico ( 231) 736 183.7 2.6e-46
NP_001277150 (OMIM: 114480,160998) ribosyldihydron ( 231) 736 183.7 2.6e-46
NP_001305869 (OMIM: 114480,160998) ribosyldihydron ( 231) 736 183.7 2.6e-46
NP_001273066 (OMIM: 125860) NAD(P)H dehydrogenase ( 202) 696 174.2 1.7e-43
NP_001277151 (OMIM: 114480,160998) ribosyldihydron ( 193) 309 82.0 9.4e-16
>>NP_000894 (OMIM: 125860) NAD(P)H dehydrogenase [quinon (274 aa)
initn: 1833 init1: 1833 opt: 1833 Z-score: 2363.1 bits: 445.0 E(85289): 6.9e-125
Smith-Waterman score: 1833; 100.0% identity (100.0% similar) in 274 aa overlap (1-274:1-274)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
190 200 210 220 230 240
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
::::::::::::::::::::::::::::::::::
NP_000 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
250 260 270
>>NP_001020605 (OMIM: 125860) NAD(P)H dehydrogenase [qui (236 aa)
initn: 921 init1: 921 opt: 933 Z-score: 1205.7 bits: 230.7 E(85289): 2e-60
Smith-Waterman score: 1468; 86.1% identity (86.1% similar) in 274 aa overlap (1-274:1-236)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
:::::::::::::::::::::::::::::::::::::::::
NP_001 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQ-------------------
70 80 90 100
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
:::::::::::::::::::::::::::::::::::::::::
NP_001 -------------------SKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
110 120 130 140
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
150 160 170 180 190 200
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
::::::::::::::::::::::::::::::::::
NP_001 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
210 220 230
>>NP_001020604 (OMIM: 125860) NAD(P)H dehydrogenase [qui (240 aa)
initn: 926 init1: 926 opt: 926 Z-score: 1196.6 bits: 229.0 E(85289): 6.5e-60
Smith-Waterman score: 1532; 87.6% identity (87.6% similar) in 274 aa overlap (1-274:1-240)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
:::::::::::::::::::: ::::::
NP_001 FIGEFAYTYAAMYDKGPFRS----------------------------------GILHFC
130 140
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
150 160 170 180 190 200
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
::::::::::::::::::::::::::::::::::
NP_001 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
210 220 230 240
>>NP_000895 (OMIM: 114480,160998) ribosyldihydronicotina (231 aa)
initn: 740 init1: 715 opt: 736 Z-score: 952.3 bits: 183.7 E(85289): 2.6e-46
Smith-Waterman score: 736; 48.4% identity (76.5% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
:.:...::: ::.: ::: ..:..:. :...: :. :::::::..: . ::::: :
NP_000 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
..: :.: .:. :::. :. ::. ::::.. :::::::::: ::.::::::::..::
NP_000 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
. ::. ..::.: ...: :.::.::::.. ::. :..:: .:::.: : ::::
NP_000 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::.:: ::.... . . : .. .:..::..:: : :.
NP_000 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
190 200 210 220 230
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
>>NP_001277150 (OMIM: 114480,160998) ribosyldihydronicot (231 aa)
initn: 740 init1: 715 opt: 736 Z-score: 952.3 bits: 183.7 E(85289): 2.6e-46
Smith-Waterman score: 736; 48.4% identity (76.5% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
:.:...::: ::.: ::: ..:..:. :...: :. :::::::..: . ::::: :
NP_001 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
..: :.: .:. :::. :. ::. ::::.. :::::::::: ::.::::::::..::
NP_001 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
. ::. ..::.: ...: :.::.::::.. ::. :..:: .:::.: : ::::
NP_001 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::.:: ::.... . . : .. .:..::..:: : :.
NP_001 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
190 200 210 220 230
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
>>NP_001305869 (OMIM: 114480,160998) ribosyldihydronicot (231 aa)
initn: 740 init1: 715 opt: 736 Z-score: 952.3 bits: 183.7 E(85289): 2.6e-46
Smith-Waterman score: 736; 48.4% identity (76.5% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
:.:...::: ::.: ::: ..:..:. :...: :. :::::::..: . ::::: :
NP_001 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
..: :.: .:. :::. :. ::. ::::.. :::::::::: ::.::::::::..::
NP_001 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
. ::. ..::.: ...: :.::.::::.. ::. :..:: .:::.: : ::::
NP_001 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::.:: ::.... . . : .. .:..::..:: : :.
NP_001 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
190 200 210 220 230
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
>>NP_001273066 (OMIM: 125860) NAD(P)H dehydrogenase [qui (202 aa)
initn: 696 init1: 696 opt: 696 Z-score: 901.7 bits: 174.2 E(85289): 1.7e-43
Smith-Waterman score: 1177; 73.7% identity (73.7% similar) in 274 aa overlap (1-274:1-202)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
:::::::::::::::::::::::::::::::::::::::::
NP_001 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQ-------------------
70 80 90 100
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
:::::::
NP_001 -----------------------------------------------------SGILHFC
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
110 120 130 140 150 160
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
::::::::::::::::::::::::::::::::::
NP_001 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
170 180 190 200
>>NP_001277151 (OMIM: 114480,160998) ribosyldihydronicot (193 aa)
initn: 565 init1: 306 opt: 309 Z-score: 403.8 bits: 82.0 E(85289): 9.4e-16
Smith-Waterman score: 502; 39.4% identity (62.9% similar) in 221 aa overlap (1-221:1-183)
10 20 30 40 50 60
pF1KE1 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
:.:...::: ::.: ::: ..:..:. :...: :. :::::::..: . ::::: :
NP_001 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
..: :.: .:. :::. :. ::. ::::.. :::::::
NP_001 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQ-------------------
70 80 90 100
130 140 150 160 170 180
pF1KE1 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
.: :.::.::::.. ::. :..:: .:::.: : ::::
NP_001 -------------------GKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
110 120 130 140
190 200 210 220 230 240
pF1KE1 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
::.:: ::.... . . : .. .:..::..:: : :.
NP_001 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
150 160 170 180 190
250 260 270
pF1KE1 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
274 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:12:26 2016 done: Mon Nov 7 02:12:27 2016
Total Scan time: 6.710 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]